DN617616

Overview
NameDN617616
Unique NameDN617616
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length604
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3731 contig Csv1_Contig3731:46..648. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DN617616 vs. ExPASy Swiss-Prot
Match: PFPB_SOLTU (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 1.841e-42
Identity = 84/97 (86.60%), Postives = 88/97 (90.72%), Query Frame = -2 
Query:  238 SGKTGLISSVGNLAAPVEEWTVSGTALTALMDVERRHGKFKPVIKKAMVELDGTPFKKFVSMRDEWALNNRYISPGPIQFTGPTSGDVNHTLLLELG 528
            SGKTGLISSVGNLAAPVEE TV GTALTALMDVERRHGKFKPVIKKAMVEL+G PFKKF S R+EWALNNRYI+PGPIQF GP +  VNHTLLLELG
Sbjct:  453 SGKTGLISSVGNLAAPVEELTVGGTALTALMDVERRHGKFKPVIKKAMVELEGAPFKKFASKREEWALNNRYINPGPIQFVGPVANKVNHTLLLELG 549
[Close]
BLAST of DN617616 vs. ExPASy Swiss-Prot
Match: PFPB_RICCO (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta OS=Ricinus communis GN=PFP-BETA PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.102e-42
Identity = 81/99 (81.82%), Postives = 88/99 (88.89%), Query Frame = -2 
Query:  235 HSGKTGLISSVGNLAAPVEEWTVSGTALTALMDVERRHGKFKPVIKKAMVELDGTPFKKFVSMRDEWALNNRYISPGPIQFTGPTSGDVNHTLLLELGA 531
            HSGKTGLISSVGNL APV EWTV GTALT+LMDVERRHGKFKPVIKKAMVEL+G PFKKF S+R+EWAL NRY+SPGPIQF GP S   +HTLLLELG+
Sbjct:  452 HSGKTGLISSVGNLGAPVAEWTVGGTALTSLMDVERRHGKFKPVIKKAMVELEGAPFKKFASLREEWALKNRYVSPGPIQFMGPGSDAASHTLLLELGS 550
The following BLAST results are available for this feature:
BLAST of DN617616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PFPB_SOLTU1.841e-4286.60Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
PFPB_RICCO4.102e-4281.82Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_01H08_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617616 ID=DN617616; Name=DN617616; organism=Citrus sinensis; type=EST; length=604bp
AATAACTAGTCAACAGTATGAGAAAATGTACATCGGCAAGAAAAAGTAAA
TAATAAAAAAATATTATCCTCATAAATCCAAACTACCGCCATTCGACACA
GAACTATCTCATTGATATCTGAAAAAGTGTCCAAATATTAGCATCAAATT
AAAAGAGACAGAAAATTGGTATCTTATAACATTTGAACTTCAATCTTCAA
TTTAAGCACACATTTAAAAACATGCTCATACTTGAGCACCGAGTTCGAGG
AGTAGTGTGTGATTAACATCACCGGATGTTGGGCCAGTGAATTGAATAGG
ACCAGGACTGATGTAGCGATTATTGAGAGCCCACTCATCTCGCATGGATA
CAAACTTCTTGAATGGTGTACCATCAAGTTCCACCATCGCCTTCTTAATC
ACAGGCTTGAACTTGCCATGTCTCCTCTCTACATCCATTAATGCAGTCAG
TGCAGTTCCACTAACAGTCCATTCTTCCACTGGAGCAGCCAAATTTCCTA
CCGATGATATCAACCCAGTTTTCCCACTATGAAAGCAGAGCACCCGCACC
ATAACCCAGTGCATAACAGTAGGTAGCATCAAAGTTTAGTTGGCAAACCG
CATC
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