DN617612

Overview
NameDN617612
Unique NameDN617612
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length604
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5737 contig Csv1_Contig5737:417..1020. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617612 vs. ExPASy Swiss-Prot
Match: ACOX1_ARATH (Peroxisomal acyl-coenzyme A oxidase 1 OS=Arabidopsis thaliana GN=ACX1 PE=1 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 2.377e-82
Identity = 149/201 (74.13%), Postives = 167/201 (83.08%), Query Frame = 2
Query:    2 DNIVLLLQVARFLMKTVSQLGYGNMPVGTTTYMGRAEQLMQCHCGVQKAEDWLNPSAILEAFEARAIRMSVACAQNLSKFTNQEEGFXXXXXXXXXXXXXHCQLIVVSKFIEKLQQDIPGKGVKPILEILCHIYALHLVHKHLGDFVSTGCITAKQASLANEQLRSLYSQVRPNAIALVDAYNYTDHYLGSVLGRYDGNVY 604
            DN+VL LQVARFLMKTV+QLG G +PVGTT YMGRA  L+QC  GVQKAEDWLNP  +LEAFEARA+RM+V CA+NLSKF NQE+GF             HCQLIVVSKFI KL+QDI GKGVK  L  LC+IYAL+L+HKHLGDF+ST CIT KQASLAN+QLRSLY+QVRPNA+ALVDA+NYTDHYL SVLGRYDGNVY
Sbjct:  426 DNVVLQLQVARFLMKTVAQLGSGKVPVGTTAYMGRAAHLLQCRSGVQKAEDWLNPDVVLEAFEARALRMAVTCAKNLSKFENQEQGFQELLADLVEAAIAHCQLIVVSKFIAKLEQDIGGKGVKKQLNNLCYIYALYLLHKHLGDFLSTNCITPKQASLANDQLRSLYTQVRPNAVALVDAFNYTDHYLNSVLGRYDGNVY 626          
BLAST of DN617612 vs. ExPASy Swiss-Prot
Match: ACO12_ARATH (Putative peroxisomal acyl-coenzyme A oxidase 1.2 OS=Arabidopsis thaliana GN=ACX1.2 PE=2 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 6.699e-77
Identity = 141/201 (70.15%), Postives = 162/201 (80.60%), Query Frame = 2
Query:    2 DNIVLLLQVARFLMKTVSQLGYGNMPVGTTTYMGRAEQLMQCHCGVQKAEDWLNPSAILEAFEARAIRMSVACAQNLSKFTNQEEGFXXXXXXXXXXXXXHCQLIVVSKFIEKLQQDIPGKGVKPILEILCHIYALHLVHKHLGDFVSTGCITAKQASLANEQLRSLYSQVRPNAIALVDAYNYTDHYLGSVLGRYDGNVY 604
            DN+VL LQVARFLMKTVSQLG G  P GTT YMGRA+ L+QC  GV+ A DWLNP  +LEAFEARA+RM+V CA NLSKF NQE+GF             HCQLIVVSKFI K++ DI GKGVK  L+ LC+IYAL+L+HKHLGDF+ST  +T +QASLAN+QLRSLYSQVRPNA+ALVDA++YTD YLGSVLGRYDGNVY
Sbjct:  426 DNVVLQLQVARFLMKTVSQLGSGKAPSGTTAYMGRAKHLLQCSSGVRNARDWLNPGMVLEAFEARALRMAVTCANNLSKFENQEQGFSELLADLVEAATAHCQLIVVSKFIAKVEGDIEGKGVKKQLKNLCYIYALYLLHKHLGDFLSTNSVTPEQASLANQQLRSLYSQVRPNAVALVDAFDYTDQYLGSVLGRYDGNVY 626          
BLAST of DN617612 vs. ExPASy Swiss-Prot
Match: ACOX1_BOVIN (Peroxisomal acyl-coenzyme A oxidase 1 OS=Bos taurus GN=ACOX1 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.416e-26
Identity = 70/208 (33.65%), Postives = 116/208 (55.77%), Query Frame = 2
Query:    2 DNIVLLLQVARFLMKTVSQLGYGNMPVGTTTYMGR--AEQLMQCHCGVQKAEDWLN-PSAILEAFEARAIRMSVACAQNLSKFT----NQEEGFXXXXXXXXXXXXXHCQLIVVSKFIEKLQQDIPGKGVKPILEILCHIYALHLVHKHLGDFVSTGCITAKQASLANEQLRSLYSQVRPNAIALVDAYNYTDHYLGSVLGRYDGNVY 604
            +N V++LQ ARFLMK+  Q+  G +  G  +Y+    ++++      V      +N P ++ EA++ RA R+    A+NL        ++E  +             HC  +VV  F EK+ Q I  K ++ +L  LC +Y+L+ + ++ GDF+    +T  Q +  N +++ L + +RP+A+ALVDA+++ D  LGSVLGRYDGNVY
Sbjct:  423 ENTVMMLQTARFLMKSYDQVHSGKLVCGMVSYLNDLPSQRIQPQQVAVWPTMVDINSPDSLTEAYKLRAARLVEIAAKNLQTEVIHRKSKEVAWNLTSIDLVRASEAHCHYVVVKLFTEKVLQ-IQEKSIQAVLRRLCLLYSLYGISQNAGDFLQGSIMTESQITQVNGRIKELLTAIRPDAVALVDAFDFQDVTLGSVLGRYDGNVY 629          
BLAST of DN617612 vs. ExPASy Swiss-Prot
Match: ACOX1_HUMAN (Peroxisomal acyl-coenzyme A oxidase 1 OS=Homo sapiens GN=ACOX1 PE=1 SV=3)

HSP 1 Score: 118.242 bits (295), Expect = 3.156e-26
Identity = 70/208 (33.65%), Postives = 117/208 (56.25%), Query Frame = 2
Query:    2 DNIVLLLQVARFLMKTVSQLGYGNMPVGTTTYMGR--AEQLMQCHCGVQKAEDWLN-PSAILEAFEARAIRMSVACAQNLSKFT----NQEEGFXXXXXXXXXXXXXHCQLIVVSKFIEKLQQDIPGKGVKPILEILCHIYALHLVHKHLGDFVSTGCITAKQASLANEQLRSLYSQVRPNAIALVDAYNYTDHYLGSVLGRYDGNVY 604
            +N V++LQ ARFLMK+  Q+  G +  G  +Y+    ++++      V      +N P ++ EA++ RA R+    A+NL K      ++E  +             HC  +VV  F EKL + I  K ++ +L  LC +Y+L+ + ++ GDF+    +T  Q +  N++++ L + +R +A+ALVDA+++ D  LGSVLGRYDGNVY
Sbjct:  423 ENTVMMLQTARFLMKSYDQVHSGKLVCGMVSYLNDLPSQRIQPQQVAVWPTMVDINSPESLTEAYKLRAARLVEIAAKNLQKEVIHRKSKEVAWNLTSVDLVRASEAHCHYVVVKLFSEKLLK-IQDKAIQAVLRSLCLLYSLYGISQNAGDFLQGSIMTEPQITQVNQRVKELLTLIRSDAVALVDAFDFQDVTLGSVLGRYDGNVY 629          
BLAST of DN617612 vs. ExPASy Swiss-Prot
Match: ACOX1_PONAB (Peroxisomal acyl-coenzyme A oxidase 1 OS=Pongo abelii GN=ACOX1 PE=2 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 4.121e-26
Identity = 70/208 (33.65%), Postives = 117/208 (56.25%), Query Frame = 2
Query:    2 DNIVLLLQVARFLMKTVSQLGYGNMPVGTTTYMGR--AEQLMQCHCGVQKAE-DWLNPSAILEAFEARAIRMSVACAQNLSKFT----NQEEGFXXXXXXXXXXXXXHCQLIVVSKFIEKLQQDIPGKGVKPILEILCHIYALHLVHKHLGDFVSTGCITAKQASLANEQLRSLYSQVRPNAIALVDAYNYTDHYLGSVLGRYDGNVY 604
            +N V++LQ ARFLMK+  Q+  G +  G  +Y+    ++++      V     D  +P ++ EA++ RA R+    A+NL K      ++E  +             HC  +VV  F EKL + I  K ++ +L  LC +Y+L+ + ++ GDF+    +T  Q +  N++++ L + +R +A+ALVDA+++ D  LGSVLGRYDGNVY
Sbjct:  423 ENTVMMLQTARFLMKSYDQVHSGKLVCGMVSYLNDLPSQRIQPQQVAVWPTMVDIHSPESLTEAYKLRAARLVEIAAKNLQKEVIHRKSKEVAWNLTSVDLVRASEAHCHYVVVKLFSEKLLK-IQDKAIQAVLRNLCLLYSLYGISQNAGDFLQGSIMTEPQITQVNQRVKELLTLIRSDAVALVDAFDFQDVTLGSVLGRYDGNVY 629          
BLAST of DN617612 vs. ExPASy Swiss-Prot
Match: ACOX1_PHACI (Peroxisomal acyl-coenzyme A oxidase 1 OS=Phascolarctos cinereus GN=ACOX1 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.199e-25
Identity = 71/211 (33.65%), Postives = 113/211 (53.55%), Query Frame = 2
Query:    2 DNIVLLLQVARFLMKTVSQLGYGNMPVGTTTYMGRAEQLMQCHCGVQKAEDWL------NPSAILEAFEARAIRMSVACAQNLSKFT----NQEEGFXXXXXXXXXXXXXHCQLIVVSKFIEKLQQDIPGKGVKPILEILCHIYALHLVHKHLGDFVSTGCITAKQASLANEQLRSLYSQVRPNAIALVDAYNYTDHYLGSVLGRYDGNVY 604
            +N V++LQ ARFLMK+  Q+  G +  G  +Y+     L       Q+   W       NP ++ EA++ RA R+  A A+NL        ++E  +             HC  +VV  F   L + I  K ++ +L  LC +YAL+ + ++ GDF+  G +T  Q +  N++++ L + +RP + ALVDA+++ D  LGSVLGRYDGN+Y
Sbjct:  423 ENTVMMLQTARFLMKSYDQVHSGKLVGGMVSYLN---DLPSQRIQPQQVAAWPAMVDINNPDSLTEAYKHRAARLVEAAARNLQAEMKHRKSKEIAWNFTSVDLVRASEAHCHYVVVKLFSGNLSK-IDDKPIQAVLTNLCLLYALYGISQNSGDFLQGGILTESQLTQVNQRVKELLTLIRPESAALVDAFDFQDVSLGSVLGRYDGNIY 629          
BLAST of DN617612 vs. ExPASy Swiss-Prot
Match: ACOX1_RAT (Peroxisomal acyl-coenzyme A oxidase 1 OS=Rattus norvegicus GN=Acox1 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.671e-25
Identity = 73/208 (35.10%), Postives = 112/208 (53.85%), Query Frame = 2
Query:    2 DNIVLLLQVARFLMKTVSQLGYGNMPVGTTTYMGR--AEQLMQCHCGVQKAEDWLNP-SAILEAFEARAIRMSVACAQNL----SKFTNQEEGFXXXXXXXXXXXXXHCQLIVVSKFIEKLQQDIPGKGVKPILEILCHIYALHLVHKHLGDFVSTGCITAKQASLANEQLRSLYSQVRPNAIALVDAYNYTDHYLGSVLGRYDGNVY 604
            +N V++LQ ARFLMK   Q+  G +  G  +Y+    ++++      V      +N    + EA++ RA R+    A+NL    S   ++E  +             HC  +VV  F +KL + I  K V+ +L  LC +Y+L+ + +  GDF+    IT  Q S  N ++  L + +RPNA+ALVDA+++ D  LGSVLGRYDGNVY
Sbjct:  423 ENTVMMLQTARFLMKIYDQVRSGKLVGGMVSYLNDLPSQRIQPQQVAVWPTMVDINSLEGLTEAYKLRAARLVEIAAKNLQTHVSHRKSKEVAWNLTSVDLVRASEAHCHYVVVKVFSDKLPK-IQDKAVQAVLRNLCLLYSLYGISQKGGDFLEGSIITGAQLSQVNARILELLTLIRPNAVALVDAFDFKDMTLGSVLGRYDGNVY 629          
BLAST of DN617612 vs. ExPASy Swiss-Prot
Match: ACOX1_CAVPO (Peroxisomal acyl-coenzyme A oxidase 1 OS=Cavia porcellus GN=ACOX1 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.326e-24
Identity = 70/208 (33.65%), Postives = 113/208 (54.33%), Query Frame = 2
Query:    2 DNIVLLLQVARFLMKTVSQLGYGNMPVGTTTYMGR--AEQLMQCHCGV-QKAEDWLNPSAILEAFEARAIRMSVACAQNL----SKFTNQEEGFXXXXXXXXXXXXXHCQLIVVSKFIEKLQQDIPGKGVKPILEILCHIYALHLVHKHLGDFVSTGCITAKQASLANEQLRSLYSQVRPNAIALVDAYNYTDHYLGSVLGRYDGNVY 604
            +N V++LQ ARFLMK   Q+  G +  G  +Y+    ++++      V     D  NP ++ E ++ RA R+    A++L    S   ++E  +             HC  +VV  F +KL + I  K ++ +L  L  +Y+L+ + +  GDF+    +T  Q +  N+++  L + +RPNA+ALVDA++Y D  LGSVLGRYDGNVY
Sbjct:  423 ENTVMMLQTARFLMKVYDQVQSGKLVHGLVSYLNDLPSQRIQPQQVAVWPTVVDINNPDSLTEIYKLRAARLIDIAAKSLQGEMSHRKSKEVAWNLTSVGLVRATDAHCHYVVVKLFADKLLK-IQDKTIQAVLRNLFLLYSLYGISQKAGDFLQGNIMTGSQITQVNQRVLELLAVIRPNAVALVDAFDYKDITLGSVLGRYDGNVY 629          
BLAST of DN617612 vs. ExPASy Swiss-Prot
Match: ACOX1_MOUSE (Peroxisomal acyl-coenzyme A oxidase 1 OS=Mus musculus GN=Acox1 PE=1 SV=4)

HSP 1 Score: 111.694 bits (278), Expect = 2.954e-24
Identity = 71/208 (34.13%), Postives = 111/208 (53.37%), Query Frame = 2
Query:    2 DNIVLLLQVARFLMKTVSQLGYGNMPVGTTTYMGR--AEQLMQCHCGVQKAEDWLNP-SAILEAFEARAIRMSVACAQNL----SKFTNQEEGFXXXXXXXXXXXXXHCQLIVVSKFIEKLQQDIPGKGVKPILEILCHIYALHLVHKHLGDFVSTGCITAKQASLANEQLRSLYSQVRPNAIALVDAYNYTDHYLGSVLGRYDGNVY 604
            +N V++LQ ARFLMK   Q+  G +  G  +Y+    ++++      V      +N   ++ EA++ RA R+    A+NL    S   ++E  +             HC  + V  F +KL + I  + V+ +L  LC +Y+L+ + +  GDF+    IT  Q S  N ++  L +  RPNA+ALVDA+++ D  LGSVLGRYDGNVY
Sbjct:  423 ENTVMMLQTARFLMKIYDQVQSGKLVGGMVSYLNDLPSQRIQPQQVAVWPTLVDINSLDSLTEAYKLRAARLVEIAAKNLQAQVSHRKSKEVAWNLTSVDLVRASEAHCHYVTVKVFADKLPK-IQDRAVQAVLRNLCLLYSLYGISQKGGDFLEGNIITGAQMSQVNSRILELLTVTRPNAVALVDAFDFKDVTLGSVLGRYDGNVY 629          
BLAST of DN617612 vs. ExPASy Swiss-Prot
Match: ACOX2_RAT (Peroxisomal acyl-coenzyme A oxidase 2 OS=Rattus norvegicus GN=Acox2 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.764e-20
Identity = 68/211 (32.23%), Postives = 98/211 (46.45%), Query Frame = 2
Query:    2 DNIVLLLQVARFLMKTVSQLGYGNMPVGTTTYMGRAEQLMQ------CHCGVQKAEDWLNPSAILEAF---EARAIRMSVACAQNLSKF-TNQEEGFXXXXXXXXXXXXXHCQLIVVSKFIEKLQQDIPGKGVKPILEILCHIYALHLVHKHLGDFVSTGCITAKQASLANEQLRSLYSQVRPNAIALVDAYNYTDHYLGSVLGRYDGNVY 604
            +N VL LQVARFLMK+  Q        G T      + +M         C  Q A D+  P     A+     R IR +    Q L K   +Q + +             HC  I V  F E +++      ++ +L+ LC +YALH V  + GDF+  G ++  Q  +A E    L   +R +AI L DA++++DH L S LG YDG+VY
Sbjct:  439 ENTVLYLQVARFLMKSYLQ---AQASPGATPQKPLPQSVMYIATQRPARCSAQTAADFRCPDVYTTAWAYVSTRLIRDAAHRTQTLMKSGVDQHDAWNQTTVIHLQAAKAHCYFITVKNFKEAVEKLDKEPEIQRVLQRLCDLYALHGVLTNSGDFLHDGFLSGAQVDMAREAFLDLLPLIRKDAILLTDAFDFSDHCLNSALGCYDGHVY 646          
The following BLAST results are available for this feature:
BLAST of DN617612 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
ACOX1_ARATH2.377e-8274.13Peroxisomal acyl-coenzyme A oxidase 1 OS=Arabidops... [more]
ACO12_ARATH6.699e-7770.15Putative peroxisomal acyl-coenzyme A oxidase 1.2 O... [more]
ACOX1_BOVIN2.416e-2633.65Peroxisomal acyl-coenzyme A oxidase 1 OS=Bos tauru... [more]
ACOX1_HUMAN3.156e-2633.65Peroxisomal acyl-coenzyme A oxidase 1 OS=Homo sapi... [more]
ACOX1_PONAB4.121e-2633.65Peroxisomal acyl-coenzyme A oxidase 1 OS=Pongo abe... [more]
ACOX1_PHACI1.199e-2533.65Peroxisomal acyl-coenzyme A oxidase 1 OS=Phascolar... [more]
ACOX1_RAT2.671e-2535.10Peroxisomal acyl-coenzyme A oxidase 1 OS=Rattus no... [more]
ACOX1_CAVPO1.326e-2433.65Peroxisomal acyl-coenzyme A oxidase 1 OS=Cavia por... [more]
ACOX1_MOUSE2.954e-2434.13Peroxisomal acyl-coenzyme A oxidase 1 OS=Mus muscu... [more]
ACOX2_RAT5.764e-2032.23Peroxisomal acyl-coenzyme A oxidase 2 OS=Rattus no... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01H04_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617612 ID=DN617612; Name=DN617612; organism=Citrus sinensis; type=EST; length=604bp
AGACAATATTGTGCTGCTCTTACAGGTTGCAAGGTTTCTCATGAAGACCG
TATCTCAGCTGGGATACGGAAATATGCCTGTTGGGACAACAACTTATATG
GGACGGGCAGAACAATTGATGCAATGTCATTGTGGCGTCCAAAAAGCTGA
GGATTGGTTAAATCCTTCTGCCATACTGGAGGCCTTTGAAGCAAGGGCTA
TTAGGATGTCTGTGGCCTGTGCTCAAAACCTGAGCAAGTTTACAAATCAA
GAAGAGGGTTTTGCGGAACTGGCAGCTGATTTAGTTGAGGCAGCTGTTGC
TCATTGCCAGCTAATTGTTGTTTCCAAGTTTATTGAGAAATTGCAGCAGG
ACATACCAGGAAAGGGGGTGAAACCAATTTTGGAGATCTTATGCCACATC
TATGCTTTGCATCTTGTTCACAAACATCTAGGTGATTTCGTCTCCACTGG
CTGCATTACTGCCAAGCAAGCTTCCCTAGCTAATGAACAGCTAAGATCTT
TATATTCCCAGGTCCGACCTAATGCTATTGCACTCGTCGATGCATATAAT
TACACCGATCACTATCTTGGCTCGGTCCTTGGACGGTATGATGGAAATGT
GTAC
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