DN617611

Overview
NameDN617611
Unique NameDN617611
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length616
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5737 contig Csv1_Contig5737:1..616. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617611 vs. ExPASy Swiss-Prot
Match: ACOX1_ARATH (Peroxisomal acyl-coenzyme A oxidase 1 OS=Arabidopsis thaliana GN=ACX1 PE=1 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 7.354e-47
Identity = 87/104 (83.65%), Postives = 98/104 (94.23%), Query Frame = -3
Query:  303 LHLVHKHLGDFVSTGCITAKQASLANEQLRSLYSQVRPNAIALVDAYNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGYHEYIRPLLKQQLRNARL 614
            L+L+HKHLGDF+ST CIT KQASLAN+QLRSLY+QVRPNA+ALVDA+NYTDHYL SVLGRYDGNVYPKL+EEA KDPLNDSVVPDGY EY+RP+L+QQLR ARL
Sbjct:  561 LYLLHKHLGDFLSTNCITPKQASLANDQLRSLYTQVRPNAVALVDAFNYTDHYLNSVLGRYDGNVYPKLFEEALKDPLNDSVVPDGYQEYLRPVLQQQLRTARL 664          
BLAST of DN617611 vs. ExPASy Swiss-Prot
Match: ACO12_ARATH (Putative peroxisomal acyl-coenzyme A oxidase 1.2 OS=Arabidopsis thaliana GN=ACX1.2 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.616e-44
Identity = 83/104 (79.81%), Postives = 97/104 (93.27%), Query Frame = -3
Query:  303 LHLVHKHLGDFVSTGCITAKQASLANEQLRSLYSQVRPNAIALVDAYNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGYHEYIRPLLKQQLRNARL 614
            L+L+HKHLGDF+ST  +T +QASLAN+QLRSLYSQVRPNA+ALVDA++YTD YLGSVLGRYDGNVYPKL+EEA KDPLNDSVVPDGY EYIRPL+KQ+ R+A+L
Sbjct:  561 LYLLHKHLGDFLSTNSVTPEQASLANQQLRSLYSQVRPNAVALVDAFDYTDQYLGSVLGRYDGNVYPKLFEEALKDPLNDSVVPDGYREYIRPLIKQRFRSAKL 664          
BLAST of DN617611 vs. ExPASy Swiss-Prot
Match: ACOX1_CAVPO (Peroxisomal acyl-coenzyme A oxidase 1 OS=Cavia porcellus GN=ACOX1 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.001e-19
Identity = 45/94 (47.87%), Postives = 65/94 (69.15%), Query Frame = -3
Query:  333 LHLVHKHLGDFVSTGCITAKQASLANEQLRSLYSQVRPNAIALVDAYNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGYHEYIRPL 614
            L+ + +  GDF+    +T  Q +  N+++  L + +RPNA+ALVDA++Y D  LGSVLGRYDGNVY  L+E A K PLN + V + YH+Y++PL
Sbjct:  564 LYGISQKAGDFLQGNIMTGSQITQVNQRVLELLAVIRPNAVALVDAFDYKDITLGSVLGRYDGNVYENLFEWAKKSPLNKTEVHESYHKYLKPL 657          
BLAST of DN617611 vs. ExPASy Swiss-Prot
Match: ACOX1_RAT (Peroxisomal acyl-coenzyme A oxidase 1 OS=Rattus norvegicus GN=Acox1 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 8.473e-19
Identity = 44/86 (51.16%), Postives = 60/86 (69.77%), Query Frame = -3
Query:  333 GDFVSTGCITAKQASLANEQLRSLYSQVRPNAIALVDAYNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGYHEYIRPL 590
            GDF+    IT  Q S  N ++  L + +RPNA+ALVDA+++ D  LGSVLGRYDGNVY  L+E A K PLN + V + YH++++PL
Sbjct:  572 GDFLEGSIITGAQLSQVNARILELLTLIRPNAVALVDAFDFKDMTLGSVLGRYDGNVYENLFEWAKKSPLNKTEVHESYHKHLKPL 657          
BLAST of DN617611 vs. ExPASy Swiss-Prot
Match: ACOX1_PHACI (Peroxisomal acyl-coenzyme A oxidase 1 OS=Phascolarctos cinereus GN=ACOX1 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.888e-18
Identity = 41/94 (43.62%), Postives = 66/94 (70.21%), Query Frame = -3
Query:  333 LHLVHKHLGDFVSTGCITAKQASLANEQLRSLYSQVRPNAIALVDAYNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGYHEYIRPL 614
            L+ + ++ GDF+  G +T  Q +  N++++ L + +RP + ALVDA+++ D  LGSVLGRYDGN+Y  ++E A K PLN S V + YH++++PL
Sbjct:  564 LYGISQNSGDFLQGGILTESQLTQVNQRVKELLTLIRPESAALVDAFDFQDVSLGSVLGRYDGNIYENMFEWAKKSPLNKSEVHESYHKHLKPL 657          
BLAST of DN617611 vs. ExPASy Swiss-Prot
Match: ACOX1_MOUSE (Peroxisomal acyl-coenzyme A oxidase 1 OS=Mus musculus GN=Acox1 PE=1 SV=4)

HSP 1 Score: 90.1225 bits (222), Expect = 9.368e-18
Identity = 43/86 (50.00%), Postives = 59/86 (68.60%), Query Frame = -3
Query:  333 GDFVSTGCITAKQASLANEQLRSLYSQVRPNAIALVDAYNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGYHEYIRPL 590
            GDF+    IT  Q S  N ++  L +  RPNA+ALVDA+++ D  LGSVLGRYDGNVY  L+E A K PLN + V + Y+++++PL
Sbjct:  572 GDFLEGNIITGAQMSQVNSRILELLTVTRPNAVALVDAFDFKDVTLGSVLGRYDGNVYENLFEWAKKSPLNKTEVHESYYKHLKPL 657          
BLAST of DN617611 vs. ExPASy Swiss-Prot
Match: ACOX1_BOVIN (Peroxisomal acyl-coenzyme A oxidase 1 OS=Bos taurus GN=ACOX1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.953e-15
Identity = 39/87 (44.83%), Postives = 59/87 (67.82%), Query Frame = -3
Query:  354 LHLVHKHLGDFVSTGCITAKQASLANEQLRSLYSQVRPNAIALVDAYNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGY 614
            L+ + ++ GDF+    +T  Q +  N +++ L + +RP+A+ALVDA+++ D  LGSVLGRYDGNVY  L+E A K PLN + V + Y
Sbjct:  564 LYGISQNAGDFLQGSIMTESQITQVNGRIKELLTAIRPDAVALVDAFDFQDVTLGSVLGRYDGNVYENLFEWAKKSPLNKTEVHESY 650          
BLAST of DN617611 vs. ExPASy Swiss-Prot
Match: ACOX1_PONAB (Peroxisomal acyl-coenzyme A oxidase 1 OS=Pongo abelii GN=ACOX1 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 4.811e-14
Identity = 37/87 (42.53%), Postives = 58/87 (66.67%), Query Frame = -3
Query:  354 LHLVHKHLGDFVSTGCITAKQASLANEQLRSLYSQVRPNAIALVDAYNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGY 614
            L+ + ++ GDF+    +T  Q +  N++++ L + +R +A+ALVDA+++ D  LGSVLGRYDGNVY  L+E A   PLN + V + Y
Sbjct:  564 LYGISQNAGDFLQGSIMTEPQITQVNQRVKELLTLIRSDAVALVDAFDFQDVTLGSVLGRYDGNVYENLFEWAKNSPLNKAEVHESY 650          
BLAST of DN617611 vs. ExPASy Swiss-Prot
Match: ACOX1_HUMAN (Peroxisomal acyl-coenzyme A oxidase 1 OS=Homo sapiens GN=ACOX1 PE=1 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 4.811e-14
Identity = 37/87 (42.53%), Postives = 58/87 (66.67%), Query Frame = -3
Query:  354 LHLVHKHLGDFVSTGCITAKQASLANEQLRSLYSQVRPNAIALVDAYNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGY 614
            L+ + ++ GDF+    +T  Q +  N++++ L + +R +A+ALVDA+++ D  LGSVLGRYDGNVY  L+E A   PLN + V + Y
Sbjct:  564 LYGISQNAGDFLQGSIMTEPQITQVNQRVKELLTLIRSDAVALVDAFDFQDVTLGSVLGRYDGNVYENLFEWAKNSPLNKAEVHESY 650          
BLAST of DN617611 vs. ExPASy Swiss-Prot
Match: ACOX2_RAT (Peroxisomal acyl-coenzyme A oxidase 2 OS=Rattus norvegicus GN=Acox2 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.284e-14
Identity = 41/95 (43.16%), Postives = 57/95 (60.00%), Query Frame = -3
Query:  330 LHLVHKHLGDFVSTGCITAKQASLANEQLRSLYSQVRPNAIALVDAYNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVVPDGYHEYIRPLL 614
            LH V  + GDF+  G ++  Q  +A E    L   +R +AI L DA++++DH L S LG YDG+VY +L+E A K P N    P  Y +YIRPL+
Sbjct:  581 LHGVLTNSGDFLHDGFLSGAQVDMAREAFLDLLPLIRKDAILLTDAFDFSDHCLNSALGCYDGHVYERLFEWAQKYPANTQENP-AYKKYIRPLM 674          
The following BLAST results are available for this feature:
BLAST of DN617611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
ACOX1_ARATH7.354e-4783.65Peroxisomal acyl-coenzyme A oxidase 1 OS=Arabidops... [more]
ACO12_ARATH2.616e-4479.81Putative peroxisomal acyl-coenzyme A oxidase 1.2 O... [more]
ACOX1_CAVPO1.001e-1947.87Peroxisomal acyl-coenzyme A oxidase 1 OS=Cavia por... [more]
ACOX1_RAT8.473e-1951.16Peroxisomal acyl-coenzyme A oxidase 1 OS=Rattus no... [more]
ACOX1_PHACI1.888e-1843.62Peroxisomal acyl-coenzyme A oxidase 1 OS=Phascolar... [more]
ACOX1_MOUSE9.368e-1850.00Peroxisomal acyl-coenzyme A oxidase 1 OS=Mus muscu... [more]
ACOX1_BOVIN1.953e-1544.83Peroxisomal acyl-coenzyme A oxidase 1 OS=Bos tauru... [more]
ACOX1_PONAB4.811e-1442.53Peroxisomal acyl-coenzyme A oxidase 1 OS=Pongo abe... [more]
ACOX1_HUMAN4.811e-1442.53Peroxisomal acyl-coenzyme A oxidase 1 OS=Homo sapi... [more]
ACOX2_RAT6.284e-1443.16Peroxisomal acyl-coenzyme A oxidase 2 OS=Rattus no... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01H04_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617611 ID=DN617611; Name=DN617611; organism=Citrus sinensis; type=EST; length=616bp
CTTCATCAATCGAAGAATAAAAATATTAGCGAAAAATAGTGCACATAAAT
AAGCAAATCGTATTACAACCATTTTATCCATCTACAAATGAAGAATCTTC
TTCCATAACGTGAAGTCTAACAAATAAACCCCGAATTCGTCAACGATCTG
ATGGATCAACTTGATAGTATCCACAGACCCATATTATTCTATTGTGGGTG
GTCAATATGTTAATTTTATTGGCAAAAATTATTGATAGGATAAAAAGTGT
ATACGATTTGAATTACTTGGGTATACACCACACCCTTTCATCATATTCTT
TAGAGTCTTGCATTTCGAAGCTGTTGTTTCAGAAGAGGCCTGATGTATTC
ATGGTAGCCATCAGGCACAACTGAGTCATTTAGAGGATCCTTCCATGCTT
CCTCGTAGAGTTTCGGGTACACATTTCCATCATACCGTCCAAGGACCGAG
CCAAGATAGTGATCGGTGTAATTATATGCATCGACGAGTGCAATAGCATT
AGGTCGGACCTGGGAATATAAAGATCTTAGCTGTTCATTAGCTAGGGAAG
CTTGCTTGGCAGTAATGCAGCCAGTGGAAACGAAATCACCTAGATGTTTG
TGAACAAGATGCAAAG
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