DN617602

Overview
NameDN617602
Unique NameDN617602
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length497
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11119 contig Csv1_Contig11119:53..549. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617602 vs. ExPASy Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.019e-34
Identity = 83/151 (54.97%), Postives = 101/151 (66.89%), Query Frame = 3
Query:   57 TPSAADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAK----LPAAQSWVANNILPHHPQNIFRYIVLGNEILARSDKVLIASLLPAMRTLKSALDAANLSSVQVSTPHSLGILSTS 497
            TPS    IGVNYGA A+NLP P  VA FL T+TTIDRVKLFDANP F+ AFA T I + V++ N  +PALA     L AA+SW+  N+ P+ P      ++ GNEIL  +D  LI SLLPAMR L  AL A  L+ V+V+TPH LGIL+ S
Sbjct:   21 TPSL--HIGVNYGANADNLPSPTSVATFLATKTTIDRVKLFDANPTFISAFAGTPISLAVSLPNSALPALADKATGLDAARSWIRANLSPYVPATNVTLLLAGNEILLSTDTNLILSLLPAMRRLAQALKAEGLTGVRVTTPHYLGILAPS 169          
BLAST of DN617602 vs. ExPASy Swiss-Prot
Match: E137_ARATH (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 2.023e-26
Identity = 59/142 (41.55%), Postives = 95/142 (66.90%), Query Frame = 3
Query:   78 IGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLP-AAQSWVANNILPHHPQNIFRYIVLGNEILARSDKVLIASLLPAMRTLKSALDAANL-SSVQVSTPHSLGILSTS 497
            IGVNYG +A+NLPPP +    L++ T+I +V+L+ A+P  ++A A T + + +   NGD+P+LA  P AA  W+ +N+LP +P +    I +GNEIL  +D  L+  LLPAM+ ++ AL+A +L   ++VST +S+ +L +S
Sbjct:   26 IGVNYGQVADNLPPPSETVKLLQS-TSIQKVRLYGADPAIIKALAGTGVGIVIGAANGDVPSLASDPNAATQWINSNVLPFYPASKIMLITVGNEILMSNDPNLVNQLLPAMQNVQKALEAVSLGGKIKVSTVNSMTVLGSS 166          
BLAST of DN617602 vs. ExPASy Swiss-Prot
Match: E1311_ARATH (Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis thaliana GN=At1g32860 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.894e-24
Identity = 63/149 (42.28%), Postives = 88/149 (59.06%), Query Frame = 3
Query:   54 ITPSAADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLPAAQSWVANNILPHHPQNIFRYIVLGNEILARSDKVLIASLLPAMRTLKSALDAANLS-SVQVSTPHSLGILSTS 497
            I P+   SIGVNYG I +NLP P  V   +K+     +VKL+DANP+ L+AF++T I   + +GN  +  +     A +W+  N+ P  P      I +GNEILA +D  L  +LLPAM+ + SAL  A LS  + V+T HSL IL +S
Sbjct:   21 ILPTTTTSIGVNYGQIGDNLPSPTDVIPLIKS-IGATKVKLYDANPQILKAFSNTGIEFIIGLGNEYLSKMKDPSKALTWIKQNVTPFLPATNITCITIGNEILALNDSSLTTNLLPAMQGVHSALITAGLSDQISVTTAHSLSILKSS 168          
BLAST of DN617602 vs. ExPASy Swiss-Prot
Match: EA6_ARATH (Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana GN=A6 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 7.197e-24
Identity = 59/144 (40.97%), Postives = 89/144 (61.81%), Query Frame = 3
Query:   69 ADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLPA-AQSWVANNILPHHPQNIFRYIVLGNEILARSDKVLIASLLPAMRTLKSALDAANLSSVQVSTPHSLGILSTS 497
            A  IG+NYG   NNLP P Q  NF+K+      VKL+DA+PE L   + TN+ VT+TV N  I AL+     A  WV  NILP++PQ   R++++GNEIL+ +   +  +L+PAMR + ++L    + +++V TP ++  L +S
Sbjct:   39 ASKIGINYGRRGNNLPSPYQSINFIKS-IKAGHVKLYDADPESLTLLSQTNLYVTITVPNHQITALSSNQTIADEWVRTNILPYYPQTQIRFVLVGNEILSYNSGNVSVNLVPAMRKIVNSLRLHGIHNIKVGTPLAMDSLRSS 181          
BLAST of DN617602 vs. ExPASy Swiss-Prot
Match: E1310_ARATH (Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis thaliana GN=At5g42100 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 7.197e-24
Identity = 61/147 (41.50%), Postives = 86/147 (58.50%), Query Frame = 3
Query:   60 PSAADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLPAAQSWVANNILPHHPQNIFRYIVLGNEILARSDKVLIASLLPAMRTLKSAL-DAANLSSVQVSTPHSLGILSTS 497
            P    SIG+NYG +ANNLPPP+ V   LK+     +VKL+DA+P+ LRAFA +   +TV +GN  +  ++    AQ WV  N+  + P      IV+GNE+L  +   L A+L PAM+++  AL D      + V+T HSL IL  S
Sbjct:   21 PLIVSSIGINYGQVANNLPPPKNVIPLLKS-VGATKVKLYDADPQALRAFAGSGFELTVALGNEYLAQMSDPIKAQGWVKENVQAYLPNTKIVAIVVGNEVLTSNQSALTAALFPAMQSIHGALVDCGLNKQIFVTTAHSLAILDVS 166          
BLAST of DN617602 vs. ExPASy Swiss-Prot
Match: E1314_ARATH (Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis thaliana GN=At2g27500/F10A12.18 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 2.315e-22
Identity = 61/142 (42.96%), Postives = 89/142 (62.68%), Query Frame = 3
Query:   78 IGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLPA-AQSWVANNILPHHPQNIFRYIVLGNEILARSDKVLIASLLPAMRTLKSALDAANL-SSVQVSTPHSLGILSTS 497
            +G+NYG IANNLP P +VA  L++   I RVKL+DA+P  L +F+++ +   + +GN  +  ++  P  AQ W+   + PH  +     IV+GNEI   +D VLI SLLPAM+++ +AL    L   V V++ HSL ILSTS
Sbjct:   29 VGINYGQIANNLPSPARVAVLLRS-LNITRVKLYDADPNVLFSFSNSQVDFMIGLGNEYLQNMSTDPTKAQDWLQQRLEPHISKTRITSIVVGNEIFKTNDHVLIQSLLPAMKSVYAALTNLGLEKQVTVTSAHSLDILSTS 169          
BLAST of DN617602 vs. ExPASy Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.189e-18
Identity = 54/145 (37.24%), Postives = 86/145 (59.31%), Query Frame = 3
Query:   69 ADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLPA-AQSWVANNILPHHPQNIFRYIVLGNEILARSDKVLIASLLPAMRTLKSALDAANL-SSVQVSTPHSLGILSTS 497
            A  IG+ YG  A+NLP P +V+  ++    I  V+++DAN + L+AFA+T I + + V N D+ A A+  +   +W++NNILP++P      I +G E+    D      +LPAMR + +AL  + L   +++S+ HSL ILS S
Sbjct:   24 ASKIGICYGRNADNLPSPNRVSELIQ-HLNIKFVRIYDANIDVLKAFANTGIELMIGVPNADLLAFAQFQSNVDTWLSNNILPYYPSTKITSISVGLEVTEAPDNA-TGLVLPAMRNIHTALKKSGLDKKIKISSSHSLAILSRS 166          
BLAST of DN617602 vs. ExPASy Swiss-Prot
Match: GUB_NICPL (Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2 SV=3)

HSP 1 Score: 88.9669 bits (219), Expect = 1.315e-17
Identity = 54/146 (36.99%), Postives = 84/146 (57.53%), Query Frame = 3
Query:   69 ADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLPA-AQSWVANNILPHHPQNIFRYIVLGNEIL-ARSDKVLIASLLPAMRTLKSALDAANL-SSVQVSTPHSLGILSTS 497
            A S+GV YG + NNLPP  QV    K++  I R++L+D N   L+A   +NI V + V N D+  +A  P+ A +WV  N+    P   FRYI +GNE+        L   LLPAMR +++A+ +A L ++++VS+   + ++  S
Sbjct:   30 AQSVGVCYGMLGNNLPPASQVVQLYKSK-NIRRMRLYDPNQAALQALRGSNIEVMLGVPNSDLQNIAANPSNANNWVQRNVRNFWPAVKFRYIAVGNEVSPVTGTSSLTRYLLPAMRNIRNAISSAGLQNNIKVSSSVDMTLIGNS 174          
BLAST of DN617602 vs. ExPASy Swiss-Prot
Match: E13D_TOBAC (Glucan endo-1,3-beta-glucosidase OS=Nicotiana tabacum GN=SP41B PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.315e-17
Identity = 55/152 (36.18%), Postives = 81/152 (53.29%), Query Frame = 3
Query:   45 CNAITPSAADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLPAAQSWVANNILPHHPQNIFRYIVLGNEILARSDKVLIASLLPAMRTLKSALDAANL-SSVQVSTPHSLGILSTS 497
            CN     A  +IGV YG IANNLP  Q V N  K    I +++++  +    +A   +NI + + V N D+ ALA    A  WV +NI  H P   F+YI +GNE+   ++      LL AM+ + +AL AA L   ++VST    G+L+ +
Sbjct:   25 CNIQITGAQSNIGVCYGEIANNLPSEQDVINLYKANG-IRKMRIYYPDTNIFKALNGSNIEIILEVPNQDLEALANSSIANGWVQDNIRSHFPYVKFKYISIGNEVSPTNNGQYSQFLLHAMKNVYNALAAAGLQDKIKVSTATYSGLLANT 175          
BLAST of DN617602 vs. ExPASy Swiss-Prot
Match: E13C_TOBAC (Glucan endo-1,3-beta-glucosidase OS=Nicotiana tabacum GN=SP41A PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.242e-17
Identity = 53/152 (34.87%), Postives = 82/152 (53.95%), Query Frame = 3
Query:   45 CNAITPSAADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLPAAQSWVANNILPHHPQNIFRYIVLGNEILARSDKVLIASLLPAMRTLKSALDAANL-SSVQVSTPHSLGILSTS 497
            CN     A  +IGV YG IANNLP  Q V N  K    I ++++++++    ++   +NI + + V N D+ ALA    A  WV +NI  H P   F+YI +GNE+   ++      LL AM  + +AL AA L   ++V+T    G+L+ +
Sbjct:   25 CNIQMTGAQSNIGVCYGKIANNLPSEQDVINLYKANG-IRKMRIYNSDTNIFKSLNGSNIEIILDVPNQDLEALANSSIANGWVQDNIRSHFPYVKFKYISIGNEVSPSNNGQYSQFLLHAMENVYNALAAAGLQDKIKVTTATYSGLLANT 175          
The following BLAST results are available for this feature:
BLAST of DN617602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
E13B_WHEAT2.019e-3454.97Glucan endo-1,3-beta-glucosidase OS=Triticum aesti... [more]
E137_ARATH2.023e-2641.55Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis ... [more]
E1311_ARATH1.894e-2442.28Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis... [more]
EA6_ARATH7.197e-2440.97Probable glucan endo-1,3-beta-glucosidase A6 OS=Ar... [more]
E1310_ARATH7.197e-2441.50Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis... [more]
E1314_ARATH2.315e-2242.96Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis... [more]
E1312_ARATH1.189e-1837.24Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... [more]
GUB_NICPL1.315e-1736.99Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2... [more]
E13D_TOBAC1.315e-1736.18Glucan endo-1,3-beta-glucosidase OS=Nicotiana taba... [more]
E13C_TOBAC2.242e-1734.87Glucan endo-1,3-beta-glucosidase OS=Nicotiana taba... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G23_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617602 ID=DN617602; Name=DN617602; organism=Citrus sinensis; type=EST; length=497bp
CTAAACTCTCTCAATTCCTCCTCTTCCTCTTCCTCTCCCTGTCTTGCAAC
GCCATCACCCCCTCCGCCGCTGACTCCATCGGCGTCAACTACGGCGCCAT
CGCCAACAACCTCCCGCCACCTCAGCAAGTAGCCAATTTCCTCAAAACCC
AAACCACCATAGACCGCGTCAAGCTCTTCGACGCCAACCCCGAATTCCTC
CGCGCCTTCGCCCACACAAACATCCCCGTCACCGTCACGGTCGGCAACGG
CGACATACCTGCCCTCGCAAAACTCCCCGCCGCCCAGTCCTGGGTCGCTA
ACAACATCCTGCCGCATCACCCCCAGAACATCTTCAGATACATCGTCCTC
GGCAACGAAATCTTGGCCAGGTCGGATAAAGTCCTCATCGCTTCTCTCCT
GCCCGCCATGAGAACTCTTAAATCAGCTCTCGATGCGGCCAATCTGAGCA
GCGTCCAGGTGTCGACACCTCATTCCCTGGGGATTTTATCAACCTCT
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