DN617575

Overview
NameDN617575
Unique NameDN617575
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length580
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12382 contig Csv1_Contig12382:945..1524. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617575 vs. ExPASy Swiss-Prot
Match: EF1G_PRUAV (Elongation factor 1-gamma OS=Prunus avium PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 1.460e-62
Identity = 108/123 (87.80%), Postives = 116/123 (94.31%), Query Frame = -2
Query:  211 DMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 579
            DMYDPEGYSLWFC+YKYNDENTVSFVTLNKV GFLQRMDLARKYAFGKML+IG+EPP+KVKGLWLFRG EIP FVM+ECYDMELY+W K D+SDE QKERVNQ+IED EPFEGEALLDAKCFK
Sbjct:  300 DMYDPEGYSLWFCEYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPPFVMEECYDMELYNWTKVDLSDENQKERVNQVIEDQEPFEGEALLDAKCFK 422          
BLAST of DN617575 vs. ExPASy Swiss-Prot
Match: EF1G1_ORYSJ (Elongation factor 1-gamma 1 OS=Oryza sativa subsp. japonica GN=Os02g0220600 PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 2.490e-62
Identity = 109/123 (88.62%), Postives = 115/123 (93.50%), Query Frame = -2
Query:  211 DMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 579
            DMYDPEGYSLWFCDYKYNDENTVSFVT+NKV GFLQRMDL RKYAFGKML+IG+EPP+KVKGLWLFRGPEIPKFVMDE YDMELY+W K DISDE QKERV+ MIED EPFEGEALLDAKCFK
Sbjct:  296 DMYDPEGYSLWFCDYKYNDENTVSFVTMNKVGGFLQRMDLCRKYAFGKMLVIGSEPPFKVKGLWLFRGPEIPKFVMDEVYDMELYEWTKVDISDEAQKERVSAMIEDLEPFEGEALLDAKCFK 418          
BLAST of DN617575 vs. ExPASy Swiss-Prot
Match: EF1G2_ORYSJ (Elongation factor 1-gamma 2 OS=Oryza sativa subsp. japonica GN=Os02g0220500 PE=2 SV=2)

HSP 1 Score: 236.884 bits (603), Expect = 5.546e-62
Identity = 108/123 (87.80%), Postives = 115/123 (93.50%), Query Frame = -2
Query:  211 DMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 579
            DMYDPEGYSLWFCDYKYNDENTVSFVT+NKV GFLQRMDL RKYAFGKML+IG+EPP+KVKGLWLFRGPEIPKFVMDE YDMELY+W K DISDE QKERV+ MIED EPFEGE+LLDAKCFK
Sbjct:  296 DMYDPEGYSLWFCDYKYNDENTVSFVTMNKVGGFLQRMDLCRKYAFGKMLVIGSEPPFKVKGLWLFRGPEIPKFVMDEVYDMELYEWTKVDISDEAQKERVSAMIEDLEPFEGESLLDAKCFK 418          
BLAST of DN617575 vs. ExPASy Swiss-Prot
Match: EF1G2_ARATH (Probable elongation factor 1-gamma 2 OS=Arabidopsis thaliana GN=At1g57720 PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 3.595e-61
Identity = 108/123 (87.80%), Postives = 114/123 (92.68%), Query Frame = -2
Query:  211 DMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 579
            DMYDPEGYSLWFCDYKYNDEN VSFVTLNKV GFLQRMDLARKY+FGKMLI G+E P+KVKGLWLFRGPEIPKF+MDE YDMELY+W K DISDE QKERV+QMIED EPFEGEALLDAKCFK
Sbjct:  291 DMYDPEGYSLWFCDYKYNDENMVSFVTLNKVGGFLQRMDLARKYSFGKMLICGSEGPFKVKGLWLFRGPEIPKFIMDEVYDMELYEWTKVDISDEAQKERVSQMIEDAEPFEGEALLDAKCFK 413          
BLAST of DN617575 vs. ExPASy Swiss-Prot
Match: EF1G1_ARATH (Probable elongation factor 1-gamma 1 OS=Arabidopsis thaliana GN=At1g09640 PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 3.595e-61
Identity = 108/123 (87.80%), Postives = 114/123 (92.68%), Query Frame = -2
Query:  211 DMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 579
            DMYDPEGYSLWFCDYKYNDEN VSFVTLNKV GFLQRMDLARKY+FGKMLI G+E P+KVKGLWLFRGPEIPKF+MDE YDMELY+W K DISDE QKERV+QMIED EPFEGEALLDAKCFK
Sbjct:  292 DMYDPEGYSLWFCDYKYNDENMVSFVTLNKVGGFLQRMDLARKYSFGKMLICGSEGPFKVKGLWLFRGPEIPKFIMDEVYDMELYEWTKVDISDEAQKERVSQMIEDAEPFEGEALLDAKCFK 414          
BLAST of DN617575 vs. ExPASy Swiss-Prot
Match: EF1G3_ORYSJ (Elongation factor 1-gamma 3 OS=Oryza sativa subsp. japonica GN=Os06g0571400 PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 2.330e-60
Identity = 105/123 (85.37%), Postives = 112/123 (91.06%), Query Frame = -2
Query:  211 DMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 579
            DMYDPEGYSLWFCDYKYNDENTVSFVT+NKV GFLQRMDL RKYAFGKML+IG+ PP+KVKGLWLFRG +IPKFVMDE YDMELY+W K D+SDE QKERVN MIED EPFEGE LLDAKCFK
Sbjct:  294 DMYDPEGYSLWFCDYKYNDENTVSFVTMNKVGGFLQRMDLCRKYAFGKMLVIGSTPPFKVKGLWLFRGQDIPKFVMDEVYDMELYEWTKVDLSDEAQKERVNAMIEDQEPFEGEDLLDAKCFK 416          
BLAST of DN617575 vs. ExPASy Swiss-Prot
Match: EF1G_TRYCR (Elongation factor 1-gamma OS=Trypanosoma cruzi PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.079e-20
Identity = 48/122 (39.34%), Postives = 77/122 (63.11%), Query Frame = -2
Query:  211 YDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIPKFVMDECYDMELYDWKK-ADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 573
            YD  GY+ ++C YKYN++N + F+T N + G+ QRM+  RKYAFG  LIIG E  + +  LW+FRG  +P  ++++  D EL+DW++ AD++   Q+ER+   +    P     +L+ + FK
Sbjct:  293 YDAAGYTTFWCRYKYNEDNKMQFMTANLIRGWFQRMEHVRKYAFGVALIIGEERRHDIVALWVFRGRGMPA-IVEDVEDTELFDWEEVADVA--AQRERITDYLSWEGPTIPRPVLEGRVFK 411          
BLAST of DN617575 vs. ExPASy Swiss-Prot
Match: EF1G_DROME (Elongation factor 1-gamma OS=Drosophila melanogaster GN=Ef1gamma PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 1.430e-17
Identity = 41/104 (39.42%), Postives = 62/104 (59.62%), Query Frame = -2
Query:  271 DMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIP-KFVMDECYDMELYDWKKADISDEEQKERVNQ 579
            D +D E YS+WF +YKYN+E +  F++ N ++G  QR+D  RK AF  + + G +    + G+W++RG ++      D   D E+YDWKK D   EE K+ V Q
Sbjct:  307 DKFDAENYSIWFGEYKYNEELSKVFMSCNLITGMFQRLDKMRKAAFASVCLFGEDGNSTISGIWVWRGQDLAFTLSPDWQIDYEVYDWKKLDAKSEETKKLVTQ 410          
BLAST of DN617575 vs. ExPASy Swiss-Prot
Match: EF1G_CARAU (Elongation factor 1-gamma OS=Carassius auratus GN=eef1g PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.430e-17
Identity = 42/116 (36.21%), Postives = 72/116 (62.07%), Query Frame = -2
Query:  238 DMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIPKFVMDECY--DMELYDWKKADISDEEQKERVNQMIEDHEPFEGE 579
            D +D EG+S+W+ +Y++ +E T+SF++ N ++G  QR+D  RK AF  +++ G      + G+W+FRG E+  F + E +  D E Y W+K D+  EE K     M++++  +EGE
Sbjct:  317 DHFDREGFSIWYAEYRFPEELTMSFMSCNLITGMFQRLDKLRKNAFASVILFGANNDSCISGIWVFRGQEL-AFTLSEDWQIDYESYTWRKLDVDSEECK----TMVKEYFAWEGE 427          
BLAST of DN617575 vs. ExPASy Swiss-Prot
Match: EF1G_DANRE (Elongation factor 1-gamma OS=Danio rerio GN=eef1g PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 9.270e-17
Identity = 39/115 (33.91%), Postives = 71/115 (61.74%), Query Frame = -2
Query:  238 DMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPYKVKGLWLFRGPEIPKFVMDEC-YDMELYDWKKADISDEEQKERVNQMIEDHEPFEGE 579
            D +D EG+S+W+ +Y++ +E T++F++ N ++G  QR+D  RK AF  +++ G      + G+W+FRG ++   + D+   D E Y W+K D+  EE K     M++++  +EGE
Sbjct:  317 DHFDREGFSIWYAEYRFPEELTMAFMSCNLITGMFQRLDKLRKNAFASVILFGANNDSCISGIWVFRGQDLAFPLSDDWQIDYESYTWRKLDVDSEECK----TMVKEYFAWEGE 427          
The following BLAST results are available for this feature:
BLAST of DN617575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
EF1G_PRUAV1.460e-6287.80Elongation factor 1-gamma OS=Prunus avium PE=2 SV=... [more]
EF1G1_ORYSJ2.490e-6288.62Elongation factor 1-gamma 1 OS=Oryza sativa subsp.... [more]
EF1G2_ORYSJ5.546e-6287.80Elongation factor 1-gamma 2 OS=Oryza sativa subsp.... [more]
EF1G2_ARATH3.595e-6187.80Probable elongation factor 1-gamma 2 OS=Arabidopsi... [more]
EF1G1_ARATH3.595e-6187.80Probable elongation factor 1-gamma 1 OS=Arabidopsi... [more]
EF1G3_ORYSJ2.330e-6085.37Elongation factor 1-gamma 3 OS=Oryza sativa subsp.... [more]
EF1G_TRYCR3.079e-2039.34Elongation factor 1-gamma OS=Trypanosoma cruzi PE=... [more]
EF1G_DROME1.430e-1739.42Elongation factor 1-gamma OS=Drosophila melanogast... [more]
EF1G_CARAU1.430e-1736.21Elongation factor 1-gamma OS=Carassius auratus GN=... [more]
EF1G_DANRE9.270e-1733.91Elongation factor 1-gamma OS=Danio rerio GN=eef1g ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G10_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617575 ID=DN617575; Name=DN617575; organism=Citrus sinensis; type=EST; length=580bp
AAAATTTAAGTATATACATTCAAGAACCATTGAAACTTGTATTAAAAAGA
TGTCCAAATCATCCTCAAAATTGCGACAAAATTATAAGTTAATACTATAA
CACAAAATACTAGACTTCGATCTTTCTGAATTCGAAACACAAACAAACTC
TACCAATAACCAAAGACAAACATGAACATCTTAAAACTAGAAAAAAGATT
AAGCTCATCACTTGAAGCACTTAGCATCCAAAAGAGCTTCACCCTCAAAA
GGCTCGTGATCCTCGATCATCTGGTTCACACGTTCCTTTTGCTCTTCGTC
TGAGATGTCAGCCTTCTTCCAGTCATACAATTCCATGTCATAGCACTCAT
CCATGACGAATTTAGGAATTTCTGGGCCACGGAAGAGCCACAACCCCTTG
ACTTTGTATGGAGGCTCGTTGCCGATAATTAGCATCTTTCCAAACGCATA
CTTGCGAGCCAGATCCATCCTCTGAAGAAACCCACTAACCTTGTTCAAGG
TCACGAATGACACAGTATTCTCGTCATTGTATTTGTAATCACAGAACCAA
AGTGAGTAACCCTCAGGATCATACATGTCC
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