DN617569

Overview
NameDN617569
Unique NameDN617569
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length644
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617569 vs. ExPASy Swiss-Prot
Match: CYB5_TOBAC (Cytochrome b5 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.900e-44
Identity = 84/107 (78.50%), Postives = 94/107 (87.85%), Query Frame = -2
Query:  323 GKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDIDSSTVXXXXXXXXXKQPHYNQDKTPEFIIKLLQFLVPLLILGLAVGIRFYTKSA 643
            GKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSA+AM+DE+YVGDIDS+T+          QPHYNQDKT EF++KLLQFLVPL+ILG+A GIRFYTK +
Sbjct:   28 GKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSARAMLDEYYVGDIDSATIPTKTKYTPPNQPHYNQDKTSEFVVKLLQFLVPLIILGVAFGIRFYTKQS 134          
BLAST of DN617569 vs. ExPASy Swiss-Prot
Match: CYB5_ORYSJ (Cytochrome b5 OS=Oryza sativa subsp. japonica GN=Os05g0108800 PE=2 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 3.545e-42
Identity = 82/106 (77.36%), Postives = 94/106 (88.68%), Query Frame = -2
Query:  326 GKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDIDSSTVXXXXXXXXXKQPHYNQDKTPEFIIKLLQFLVPLLILGLAVGIRFYTKS 643
            GKVY+V+KFL+DHPGGD+VLLS+TGKDATDDFEDVGHS++A+AMMDE+YVGDID+ST+         KQPHYNQDKTPEFIIK+LQFLVPL ILGLAV IR YTKS
Sbjct:   29 GKVYNVSKFLEDHPGGDDVLLSSTGKDATDDFEDVGHSTTARAMMDEYYVGDIDTSTIPARTKYVPPKQPHYNQDKTPEFIIKILQFLVPLAILGLAVAIRIYTKS 134          
BLAST of DN617569 vs. ExPASy Swiss-Prot
Match: CYB5S_TOBAC (Cytochrome b5, seed isoform OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.630e-42
Identity = 81/107 (75.70%), Postives = 93/107 (86.92%), Query Frame = -2
Query:  323 GKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDIDSSTVXXXXXXXXXKQPHYNQDKTPEFIIKLLQFLVPLLILGLAVGIRFYTKSA 643
            GKVY+VTKFL+DHPGG EVLLSATGKDATDDFED+GHSSSA+AM+DE+YVGDIDSST+         KQPHYNQDKT EFI+KLLQFLVPL+ILG+A G+ FYTK +
Sbjct:   28 GKVYNVTKFLEDHPGGGEVLLSATGKDATDDFEDIGHSSSARAMLDEYYVGDIDSSTIPTKVKYTPPKQPHYNQDKTTEFIVKLLQFLVPLIILGVAFGVHFYTKQS 134          
BLAST of DN617569 vs. ExPASy Swiss-Prot
Match: CYB5_BOROF (Cytochrome b5 OS=Borago officinalis PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 3.919e-41
Identity = 82/107 (76.64%), Postives = 93/107 (86.92%), Query Frame = -2
Query:  323 GKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDIDSSTVXXXXXXXXXKQPHYNQDKTPEFIIKLLQFLVPLLILGLAVGIRFYTKSA 643
            GKVYDVTKFL+DHPGGD+VLLSATGKDATDDFED+GHSSSAKAM+DE+YVGDIDSS++         KQP YN DKT EF+IKLLQFLVPL+IL  A+GIRFYTKS+
Sbjct:   25 GKVYDVTKFLEDHPGGDDVLLSATGKDATDDFEDIGHSSSAKAMLDEYYVGDIDSSSIPSQVKYTPPKQPLYNPDKTREFVIKLLQFLVPLVILAGAIGIRFYTKSS 131          
BLAST of DN617569 vs. ExPASy Swiss-Prot
Match: CYB5_CUSRE (Cytochrome b5 OS=Cuscuta reflexa PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.489e-40
Identity = 82/107 (76.64%), Postives = 91/107 (85.05%), Query Frame = -2
Query:  323 GKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDIDSSTVXXXXXXXXXKQPHYNQDKTPEFIIKLLQFLVPLLILGLAVGIRFYTKSA 643
            GKVYDVTKFLDDHPGG +VLLS+T KDATDDFED+GHSSSA+AMMDE  VGDIDSST+         KQP YNQDKTP+FIIKLLQFLVPL+ILG+AVGIRFY K +
Sbjct:   27 GKVYDVTKFLDDHPGGADVLLSSTAKDATDDFEDIGHSSSARAMMDEMCVGDIDSSTIPTKTSYTPPKQPLYNQDKTPQFIIKLLQFLVPLIILGVAVGIRFYKKQS 133          
BLAST of DN617569 vs. ExPASy Swiss-Prot
Match: CYB52_ARATH (Probable cytochrome b5 isoform 2 OS=Arabidopsis thaliana GN=At2g32720 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.945e-40
Identity = 80/106 (75.47%), Postives = 91/106 (85.85%), Query Frame = -2
Query:  326 GKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDIDSSTVXXXXXXXXXKQPHYNQDKTPEFIIKLLQFLVPLLILGLAVGIRFYTKS 643
            GKVY+VTKFL+DHPGGD+VLLS+TGKDATDDFEDVGHS SA+ MM+++YVG+ID +T+         KQPHYNQDKT EFIIKLLQFLVPL ILGLAVGIR YTKS
Sbjct:   28 GKVYNVTKFLEDHPGGDDVLLSSTGKDATDDFEDVGHSESAREMMEQYYVGEIDPTTIPKKVKYTPPKQPHYNQDKTSEFIIKLLQFLVPLAILGLAVGIRIYTKS 133          
BLAST of DN617569 vs. ExPASy Swiss-Prot
Match: CYB51_ARATH (Cytochrome b5 isoform 1 OS=Arabidopsis thaliana GN=At5g53560 PE=2 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 5.297e-38
Identity = 74/105 (70.48%), Postives = 90/105 (85.71%), Query Frame = -2
Query:  329 GKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDIDSSTVXXXXXXXXXKQPHYNQDKTPEFIIKLLQFLVPLLILGLAVGIRFYTK 643
            GKVYDVT F+DDHPGGDEVLLS+TGKDAT+DFEDVGHS +A+ MMD++++G+IDSS+V         +QP YNQDKTPEFIIK+LQFLVP+LILGLA+ +R YTK
Sbjct:   28 GKVYDVTPFMDDHPGGDEVLLSSTGKDATNDFEDVGHSDTARDMMDKYFIGEIDSSSVPATRTYVAPQQPAYNQDKTPEFIIKILQFLVPILILGLALVVRHYTK 132          
BLAST of DN617569 vs. ExPASy Swiss-Prot
Match: CYB5_BRAOB (Cytochrome b5 OS=Brassica oleracea var. botrytis GN=CYB5 PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 6.918e-38
Identity = 74/105 (70.48%), Postives = 89/105 (84.76%), Query Frame = -2
Query:  329 GKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDIDSSTVXXXXXXXXXKQPHYNQDKTPEFIIKLLQFLVPLLILGLAVGIRFYTK 643
            GKVYDVT F+DDHPGGDEVLLS+TGKDAT+DFEDVGHS +A+ MM+++Y+G+IDSSTV          QP YNQDKTPEF+IK+LQFLVP+LILGLA+ +R YTK
Sbjct:   28 GKVYDVTPFMDDHPGGDEVLLSSTGKDATNDFEDVGHSDTARDMMEKYYIGEIDSSTVPATRTYVAPVQPAYNQDKTPEFMIKILQFLVPILILGLALVVRQYTK 132          
BLAST of DN617569 vs. ExPASy Swiss-Prot
Match: CYB5B_PONAB (Cytochrome b5 type B OS=Pongo abelii GN=CYB5B PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 6.301e-15
Identity = 34/56 (60.71%), Postives = 46/56 (82.14%), Query Frame = -2
Query:  476 GKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDIDSS 643
            G+VYDVT+FL++HPGG+EVLL   G DA++ FEDVGHSS A+ M+ ++Y+GDI  S
Sbjct:   43 GRVYDVTRFLNEHPGGEEVLLEQAGVDASESFEDVGHSSDAREMLKQYYIGDIHPS 98          
BLAST of DN617569 vs. ExPASy Swiss-Prot
Match: CYB5B_HUMAN (Cytochrome b5 type B OS=Homo sapiens GN=CYB5B PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 6.301e-15
Identity = 34/56 (60.71%), Postives = 46/56 (82.14%), Query Frame = -2
Query:  476 GKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDIDSS 643
            G+VYDVT+FL++HPGG+EVLL   G DA++ FEDVGHSS A+ M+ ++Y+GDI  S
Sbjct:   43 GRVYDVTRFLNEHPGGEEVLLEQAGVDASESFEDVGHSSDAREMLKQYYIGDIHPS 98          
The following BLAST results are available for this feature:
BLAST of DN617569 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
CYB5_TOBAC2.900e-4478.50Cytochrome b5 OS=Nicotiana tabacum PE=2 SV=1[more]
CYB5_ORYSJ3.545e-4277.36Cytochrome b5 OS=Oryza sativa subsp. japonica GN=O... [more]
CYB5S_TOBAC4.630e-4275.70Cytochrome b5, seed isoform OS=Nicotiana tabacum P... [more]
CYB5_BOROF3.919e-4176.64Cytochrome b5 OS=Borago officinalis PE=2 SV=1[more]
CYB5_CUSRE1.489e-4076.64Cytochrome b5 OS=Cuscuta reflexa PE=2 SV=1[more]
CYB52_ARATH1.945e-4075.47Probable cytochrome b5 isoform 2 OS=Arabidopsis th... [more]
CYB51_ARATH5.297e-3870.48Cytochrome b5 isoform 1 OS=Arabidopsis thaliana GN... [more]
CYB5_BRAOB6.918e-3870.48Cytochrome b5 OS=Brassica oleracea var. botrytis G... [more]
CYB5B_PONAB6.301e-1560.71Cytochrome b5 type B OS=Pongo abelii GN=CYB5B PE=2... [more]
CYB5B_HUMAN6.301e-1560.71Cytochrome b5 type B OS=Homo sapiens GN=CYB5B PE=1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G06_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617569 ID=DN617569; Name=DN617569; organism=Citrus sinensis; type=EST; length=644bp
TTTTTTTTTTTTACGAGAAAGGAAGCCCAAAGGCCATTTGGACAATTGGT
GCTTTCCCCCCTTTATTTTAGATGAAGATGCATAAGAATAAAAATGAAAG
CAAAGCCAAAACGAGGAACTGCAAATAGATCATTGCATTCCAAGTCATGC
GGGCAGTGAATGGTCACTTATCAAACACAAGCACATGACATCAAAAAAGA
TAAAGAACCCTACATTTTCTGGTGATAATAGTTCCAAACAACTAGTAAAA
ACAAGGTGCAATGCAACGGATATAGATTTATTGTAAATGTTTCTCCAATT
TTTATCTTGCAAGGTATCATTAAGCGGATTTGGTATAGAAGCGGATGCCA
ACAGCCAATCCTAAGATTAGCAGAGGAACTAGGAACTGGAGGAGCTTTAT
AATAAACTCGGGTGTCTTGTCTTGGTTGTAGTGAGGCTGCTTGGGAGGGG
TGTACTTGGTCTTGGTGGGAACGGTTGATGAATCAATGTCACCCACATAG
AATTCATCCATCATCGCTTTTGCACTGCTACTGTGACCAACATCCTCAAA
GTCGTCAGTCGCATCCTTTCCTGTGGCAGACAACAATACCTCGTCTCCAC
CAGGATGGTCATCCAAGAATTTTGTCACATCATATACCTTGCCC
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