DN617556

Overview
NameDN617556
Unique NameDN617556
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length535
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN617556_ssr133 microsatellite DN617556_ssr133:133..144. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig5733 contig Csv1_Contig5733:1..543. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DN617556 vs. ExPASy Swiss-Prot
Match: PP2A_HEVBR (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Hevea brasiliensis GN=PP2A PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 3.212e-63
Identity = 114/117 (97.44%), Postives = 115/117 (98.29%), Query Frame = 3 
Query:  183 MPSHGDLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES 533
            MPSHGDLDRQIEHLMECKPLPEA  +TLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES
Sbjct:    1 MPSHGDLDRQIEHLMECKPLPEARGQTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES 117
[Close]
BLAST of DN617556 vs. ExPASy Swiss-Prot
Match: PP2A2_ARATH (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Arabidopsis thaliana GN=PP2A2 PE=1 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 5.669e-60
Identity = 109/117 (93.16%), Postives = 115/117 (98.29%), Query Frame = 3 
Query:  183 MPSHGDLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES 533
            MPS+GDLDRQIE LMECKPL EA+V+TLCDQARAILVEE+NVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETV+LLVALKVRYRDR+TILRGNHES
Sbjct:    1 MPSNGDLDRQIEQLMECKPLSEADVRTLCDQARAILVEEYNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYRDRLTILRGNHES 117
[Close]
BLAST of DN617556 vs. ExPASy Swiss-Prot
Match: PP2A_HELAN (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 4.799e-59
Identity = 108/117 (92.31%), Postives = 113/117 (96.58%), Query Frame = 3 
Query:  183 MPSHGDLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES 533
            MPS  DLDRQIEHLM+CKPLPE EV+TLCDQAR ILVEEWNVQPVKCPVTVCGDIHGQF+DL+ELFRIGG+APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES
Sbjct:    1 MPSQSDLDRQIEHLMDCKPLPE-EVRTLCDQARTILVEEWNVQPVKCPVTVCGDIHGQFHDLLELFRIGGSAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES 116
[Close]
BLAST of DN617556 vs. ExPASy Swiss-Prot
Match: PP2A1_ARATH (Serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Arabidopsis thaliana GN=PP2A1 PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 1.824e-58
Identity = 107/117 (91.45%), Postives = 113/117 (96.58%), Query Frame = 3 
Query:  183 MPSHGDLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES 533
            MP +GDLDRQIE LMECKPL EA+VK LCDQA+AILVEE+NVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETV+LLVALKVRYRDR+TILRGNHES
Sbjct:    1 MPLNGDLDRQIEQLMECKPLGEADVKILCDQAKAILVEEYNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYRDRLTILRGNHES 117
[Close]
BLAST of DN617556 vs. ExPASy Swiss-Prot
Match: PP2A1_ORYSJ (Serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Oryza sativa subsp. japonica GN=PP2A1 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 1.707e-56
Identity = 103/117 (88.03%), Postives = 110/117 (94.02%), Query Frame = 3 
Query:  183 MPSHGDLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES 533
            MPSH DLDRQI  L ECK L EAEV+ LC+QA+AIL+EEWNVQPV+CPVTVCGDIHGQFYDLIELFRIGG++PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES
Sbjct:    1 MPSHADLDRQISQLRECKFLGEAEVRALCEQAKAILMEEWNVQPVRCPVTVCGDIHGQFYDLIELFRIGGDSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES 117
[Close]
BLAST of DN617556 vs. ExPASy Swiss-Prot
Match: PP2A1_ORYSI (Serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Oryza sativa subsp. indica GN=PP2A1 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 1.707e-56
Identity = 103/117 (88.03%), Postives = 110/117 (94.02%), Query Frame = 3 
Query:  183 MPSHGDLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES 533
            MPSH DLDRQI  L ECK L EAEV+ LC+QA+AIL+EEWNVQPV+CPVTVCGDIHGQFYDLIELFRIGG++PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES
Sbjct:    1 MPSHADLDRQISQLRECKFLGEAEVRALCEQAKAILMEEWNVQPVRCPVTVCGDIHGQFYDLIELFRIGGDSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES 117
[Close]
BLAST of DN617556 vs. ExPASy Swiss-Prot
Match: PP2A3_ORYSJ (Serine/threonine-protein phosphatase PP2A-3 catalytic subunit OS=Oryza sativa subsp. japonica GN=PP2A3 PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 2.465e-55
Identity = 101/115 (87.83%), Postives = 107/115 (93.04%), Query Frame = 3 
Query:  189 SHGDLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES 533
            SHGDLDRQI  L ECK L E EV+ LC+QA+AIL+EEWNVQPV+CPVTVCGDIHGQFYDLIELFRIGG APDTNYLFMGDYVDRGYYSVETV+LLVALKVRYRDRITILRGNHES
Sbjct:    4 SHGDLDRQIAQLRECKHLAEGEVRALCEQAKAILMEEWNVQPVRCPVTVCGDIHGQFYDLIELFRIGGEAPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYRDRITILRGNHES 118
[Close]
BLAST of DN617556 vs. ExPASy Swiss-Prot
Match: PP2A3_ORYSI (Serine/threonine-protein phosphatase PP2A-3 catalytic subunit OS=Oryza sativa subsp. indica GN=PP2A3 PE=2 SV=2)

HSP 1 Score: 214.542 bits (545), Expect = 2.465e-55
Identity = 101/115 (87.83%), Postives = 107/115 (93.04%), Query Frame = 3 
Query:  189 SHGDLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES 533
            SHGDLDRQI  L ECK L E EV+ LC+QA+AIL+EEWNVQPV+CPVTVCGDIHGQFYDLIELFRIGG APDTNYLFMGDYVDRGYYSVETV+LLVALKVRYRDRITILRGNHES
Sbjct:    4 SHGDLDRQIAQLRECKHLAEGEVRALCEQAKAILMEEWNVQPVRCPVTVCGDIHGQFYDLIELFRIGGEAPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYRDRITILRGNHES 118
[Close]
BLAST of DN617556 vs. ExPASy Swiss-Prot
Match: PP2A5_ARATH (Serine/threonine-protein phosphatase PP2A-5 catalytic subunit OS=Arabidopsis thaliana GN=PP2A5 PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 2.725e-54
Identity = 99/116 (85.34%), Postives = 108/116 (93.10%), Query Frame = 3 
Query:  186 PSHGDLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES 533
            P+ GD+DRQIE LMECK L E EVK LC+ A+ ILVEE+NVQPVKCPVTVCGDIHGQFYDLIELFRIGG++PDTNYLFMGDYVDRGYYSVETV+LLVALKVRYRDR+TILRGNHES
Sbjct:    3 PATGDIDRQIEQLMECKALSETEVKMLCEHAKTILVEEYNVQPVKCPVTVCGDIHGQFYDLIELFRIGGSSPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYRDRLTILRGNHES 118
[Close]
BLAST of DN617556 vs. ExPASy Swiss-Prot
Match: PP2A2_ORYSJ (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Oryza sativa subsp. japonica GN=PP2A2 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 6.946e-50
Identity = 93/114 (81.58%), Postives = 101/114 (88.60%), Query Frame = 3 
Query:  192 HGDLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES 533
            HG LD QIE LM+CKPLPE EV+ LC++A+ IL+EE NVQPVK PVT+CGDIHGQF+DL ELFRIGG  PDTNYLFMGDYVDRGYYSVETVTLLVALKVRY  RITILRGNHES
Sbjct:    5 HGGLDDQIERLMQCKPLPEPEVRALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHES 118
The following BLAST results are available for this feature:
BLAST of DN617556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
PP2A_HEVBR3.212e-6397.44Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A2_ARATH5.669e-6093.16Serine/threonine-protein phosphatase PP2A-2 cataly... [more]
PP2A_HELAN4.799e-5992.31Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A1_ARATH1.824e-5891.45Serine/threonine-protein phosphatase PP2A-1 cataly... [more]
PP2A1_ORYSJ1.707e-5688.03Serine/threonine-protein phosphatase PP2A-1 cataly... [more]
PP2A1_ORYSI1.707e-5688.03Serine/threonine-protein phosphatase PP2A-1 cataly... [more]
PP2A3_ORYSJ2.465e-5587.83Serine/threonine-protein phosphatase PP2A-3 cataly... [more]
PP2A3_ORYSI2.465e-5587.83Serine/threonine-protein phosphatase PP2A-3 cataly... [more]
PP2A5_ARATH2.725e-5485.34Serine/threonine-protein phosphatase PP2A-5 cataly... [more]
PP2A2_ORYSJ6.946e-5081.58Serine/threonine-protein phosphatase PP2A-2 cataly... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01F24_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001F24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617556 ID=DN617556; Name=DN617556; organism=Citrus sinensis; type=EST; length=535bp
AAGAAAAATAATTACCAAGTAATGAGTCAATGATAGAGAGAACAAATTCA
TTCCGATCATCTAAGGGCTTCGTTTTCGTAATCCGCAACCCTATTTCTAA
ACAGTCTATCGATTTTCTAACTATCTAGGATTTCGATCGATCGATCTGTG
GATCTGCTGCGATCTAAACTTAGAGTGAAACGATGCCGTCGCACGGGGAT
CTGGACAGGCAGATCGAGCACTTGATGGAGTGCAAGCCGTTACCGGAGGC
GGAGGTGAAGACACTGTGCGATCAAGCAAGAGCGATTTTGGTGGAGGAGT
GGAACGTGCAGCCGGTCAAGTGTCCGGTCACCGTTTGCGGCGATATTCAC
GGTCAATTTTATGATCTAATCGAGCTCTTTCGCATAGGTGGAAATGCTCC
TGACACTAATTATCTCTTTATGGGTGATTACGTAGATCGGGGTTACTATT
CAGTGGAAACTGTCACACTATTGGTGGCACTGAAAGTTCGATACAGAGAT
AGAATTACAATCCTAAGAGGGAATCATGAGAGTCG
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