DN617518

Overview
NameDN617518
Unique NameDN617518
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length675
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5731 contig Csv1_Contig5731:1..675. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617518 vs. ExPASy Swiss-Prot
Match: COGT2_ARATH (Cytokinin-O-glucosyltransferase 2 OS=Arabidopsis thaliana GN=UGT85A1 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.066e-16
Identity = 55/211 (26.07%), Postives = 101/211 (47.87%), Query Frame = 3
Query:   66 HKKPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIRYATVSDGLP-LNFDRSLNHDQFMECLLHVFSAHVDELVG--NLIQLNPEMNCLVTDTFFVWSSMIAKKYNLVNISFWTEPALVITLYYHMDLLRSHG-------HFASTDNREDT-IDYIPGVRGIERKDLMSYLSATD 665
            H   KPH + + YP QGH+ P + +A  L + GF +TFVNT   H++  +++ +   D +           R+ +++DGLP  + D + +     E  +    A   EL+   N     P ++C+V+D    ++  +A++  +  + FWT        Y H  L    G        + + +  EDT ID+IP ++ ++ KD+ S++  T+
Sbjct:    7 HNSQKPHVVCVPYPAQGHINPMMRVAKLLHARGFYVTFVNTVYNHNRFLRSRGSNALDGL--------PSFRFESIADGLPETDMDATQDITALCESTMKNCLAPFRELLQRINAGDNVPPVSCIVSDGCMSFTLDVAEELGVPEVLFWTTSGCAFLAYLHFYLFIEKGLCPLKDESYLTKEYLEDTVIDFIPTMKNVKLKDIPSFIRTTN 209          
BLAST of DN617518 vs. ExPASy Swiss-Prot
Match: IABG2_ARATH (Indole-3-acetate beta-glucosyltransferase 2 OS=Arabidopsis thaliana GN=UGT75B2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.507e-11
Identity = 52/205 (25.37%), Postives = 96/205 (46.83%), Query Frame = 3
Query:   78 KPHAIAICYPLQGHVIPFVNLALKLA-SSGFTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIRYATVSDGLPLNFDRSL--NHDQFMECLLHVFSAHVDELVGNLIQLNPE----MNCLVTDTFFVWSSMIAKKYNLVNISFWTEPALVITLYYHMDLLRSHGHFASTDNREDTIDYIPGVRGIERKDLMSYLSATDTS 671
            +PH + + +P QGHV P +  A +L  ++G  +TF    S+ H+      N  E+            + + T SDG    FD  +  N D     L+H F  + D+ + + I+ N      ++CL+      W   +A++++L ++  W +PA    +YY+           ST N  +++   P +  +E +DL S+LS ++T+
Sbjct:    3 QPHFLLVTFPAQGHVNPSLRFARRLIKTTGARVTFATCLSVIHRSMIPNHNNVEN------------LSFLTFSDG----FDDGVISNTDDVQNRLVH-FERNGDKALSDFIEANQNGDSPVSCLIYTILPNWVPKVARRFHLPSVHLWIQPAFAFDIYYNY----------STGN--NSVFEFPNLPSLEIRDLPSFLSPSNTN 178          
The following BLAST results are available for this feature:
BLAST of DN617518 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
COGT2_ARATH8.066e-1626.07Cytokinin-O-glucosyltransferase 2 OS=Arabidopsis t... [more]
IABG2_ARATH3.507e-1125.37Indole-3-acetate beta-glucosyltransferase 2 OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_01F01_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617518 ID=DN617518; Name=DN617518; organism=Citrus sinensis; type=EST; length=675bp
GCACTACAAAATAGCCCACCAAAATTTGTCATTCCCATCATAAAAAGCTA
GAGATGGAGAACAATCACAAAAAACCTAAGCCTCATGCAATTGCGATCTG
CTACCCTCTCCAAGGTCACGTTATTCCTTTTGTGAATCTAGCCCTGAAGC
TCGCCTCCAGTGGCTTTACTATCACCTTTGTCAACACTCATTCAATCCAT
CACCAAATAACCAAGGCTCAATCCAACGGTGACGAGGACGACATCTTTGC
CGGCGCACGTAAAGCCGGTCTAGATATACGTTACGCAACGGTCAGTGATG
GGCTTCCTTTAAATTTTGACCGATCACTCAACCATGACCAGTTCATGGAA
TGTCTTTTACATGTGTTCTCTGCACATGTTGATGAACTTGTTGGAAATTT
AATCCAATTGAACCCCGAAATGAATTGCTTAGTTACCGACACTTTTTTTG
TTTGGTCCTCAATGATTGCCAAGAAATATAACCTTGTTAATATCTCGTTT
TGGACTGAACCAGCTCTGGTTATAACTCTTTATTATCACATGGATCTCCT
AAGAAGTCATGGCCACTTTGCTTCTACTGATAATCGTGAGGACACCATTG
ACTATATACCGGGAGTTCGGGGCATAGAACGAAAGGACTTGATGTCATAT
CTTTCAGCTACAGACACATCAACTG
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