DN617515

Overview
NameDN617515
Unique NameDN617515
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length597
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617515 vs. ExPASy Swiss-Prot
Match: YIPL_SOLTU (Protein yippee-like OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 7.685e-62
Identity = 108/128 (84.38%), Postives = 118/128 (92.19%), Query Frame = -2
Query:  144 MGRLFVVNLEGKIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKYKEGKSVLERFKVSGPDGSNYWVSHEAHVGGSDADD 527
            MGRLFV+ LEGKIYSCKHC THLAL E++VSKSFHC+HGKAYLFSKVVNV+ GE E R+MMTGMHTVADIFCV CGSIVGWKYETAHEKSQKYKEGKSVLERFK++GPDGS+YW SH+ HV GSDADD
Sbjct:    1 MGRLFVLTLEGKIYSCKHCGTHLALSENIVSKSFHCKHGKAYLFSKVVNVTSGEIENRMMMTGMHTVADIFCVCCGSIVGWKYETAHEKSQKYKEGKSVLERFKITGPDGSHYWASHDTHVAGSDADD 128          
BLAST of DN617515 vs. ExPASy Swiss-Prot
Match: YIPL3_ARATH (Protein yippee-like At3g11230 OS=Arabidopsis thaliana GN=At3g11230 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 6.302e-56
Identity = 100/129 (77.52%), Postives = 112/129 (86.82%), Query Frame = -2
Query:  141 MGRLFVVNLEGKIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKYKEGKSVLERFKVSGPDGSNYWVSHEAHVGGSDADDA 527
            MGRLF+VNLEGK YSCKHC+T+LALC+DVVSKSF  RHGKAYLFSKVVNV  G+KE+R+MMTGMHTV DI+CV CGS VGWKYE A EK+QKYKEGKSVLER+KV GPDG+NYWV+ E   G SD DDA
Sbjct:    1 MGRLFLVNLEGKSYSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMMMTGMHTVVDIYCVKCGSYVGWKYEFAFEKNQKYKEGKSVLERYKVWGPDGNNYWVAQEVEAGDSDTDDA 129          
BLAST of DN617515 vs. ExPASy Swiss-Prot
Match: YIPL1_ARATH (Protein yippee-like At3g08990 OS=Arabidopsis thaliana GN=At3g08990 PE=2 SV=2)

HSP 1 Score: 190.66 bits (483), Expect = 4.836e-48
Identity = 84/128 (65.62%), Postives = 106/128 (82.81%), Query Frame = -2
Query:  144 MGRLFVVNLEGKIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKYKEGKSVLERFKVSGPDGSNYWVSHEAHVGGSDADD 527
            MGRLFV++LEG +YSCK+C+TH A+  D++SKSFHC+HG+AYLF  VVNV+VGEKE R+M+TG HTVADIFCV CGS+VGWKYE A++KSQKYKEGK +LERFKV GP G  Y ++    + GSD ++
Sbjct:    1 MGRLFVIDLEGLVYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVMITGWHTVADIFCVSCGSLVGWKYEIAYDKSQKYKEGKFILERFKVLGPYGGGYDMNQNEPMTGSDDEE 128          
BLAST of DN617515 vs. ExPASy Swiss-Prot
Match: YIPL4_ARATH (Protein yippee-like At3g55890 OS=Arabidopsis thaliana GN=At3g55890 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 5.005e-45
Identity = 86/129 (66.67%), Postives = 104/129 (80.62%), Query Frame = -2
Query:  141 MGRLFVVNLEGKIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKYKEGKSVLERFKVSGPDGSNYWVSHEAHVGGSDADDA 527
            MGR+F+V+LEG IY CK C+THL+  +D++SKSF C++G+AYLF+ VVNVSVGEKE+R+M+TG+H V DIFCVGCGS VGWKYE AHEKSQKYKEGKSVLE +K+SGP  SN  V        SD DDA
Sbjct:    1 MGRVFMVDLEGNIYICKLCKTHLSTDQDIMSKSFQCKNGRAYLFNNVVNVSVGEKEDRMMITGLHNVVDIFCVGCGSNVGWKYEFAHEKSQKYKEGKSVLELYKISGPHDSNDLV--------SDGDDA 121          
BLAST of DN617515 vs. ExPASy Swiss-Prot
Match: YIPL7_ARATH (Protein yippee-like At5g53940 OS=Arabidopsis thaliana GN=At5g53940 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.276e-40
Identity = 78/129 (60.47%), Postives = 98/129 (75.97%), Query Frame = -2
Query:  141 MGRLFVVNLEGKIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKYKEGKSVLERFKVSGPDGSNYWVSHEAHVGGSDADDA 527
            MGR+F V LEG+ Y C+ CRTHLAL +D+VS+SFHCR GKAYLF++ VN+S+G  EERLM++GMHTVADIFC  CG  VGWKYE+AHEK+QKYKEGK VLER ++      +  V  + H   SD +D+
Sbjct:    1 MGRIFTVELEGRSYRCRFCRTHLALPDDLVSRSFHCRRGKAYLFNRSVNISMGPLEERLMLSGMHTVADIFCCCCGQNVGWKYESAHEKAQKYKEGKFVLERGRIVDEIDLSTEVYIDTHGSTSDTEDS 129          
BLAST of DN617515 vs. ExPASy Swiss-Prot
Match: YPEL4_RAT (Protein yippee-like 4 OS=Rattus norvegicus GN=Ypel4 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.112e-27
Identity = 53/90 (58.89%), Postives = 69/90 (76.67%), Query Frame = -2
Query:  225 KIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKYKEGKSVLE 494
            + YSC HCR HLA  ++++SKSF   HG+AYLF+ VVNV  G  E+RL++TG+H+VADIFC  C + +GWKYE A E SQKYKEGK ++E
Sbjct:   27 RTYSCVHCRAHLAKHDELISKSFQGSHGRAYLFNSVVNVGCGPAEQRLLLTGLHSVADIFCESCKTTLGWKYEQAFETSQKYKEGKYIIE 116          
BLAST of DN617515 vs. ExPASy Swiss-Prot
Match: YPEL4_MOUSE (Protein yippee-like 4 OS=Mus musculus GN=Ypel4 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.112e-27
Identity = 53/90 (58.89%), Postives = 69/90 (76.67%), Query Frame = -2
Query:  225 KIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKYKEGKSVLE 494
            + YSC HCR HLA  ++++SKSF   HG+AYLF+ VVNV  G  E+RL++TG+H+VADIFC  C + +GWKYE A E SQKYKEGK ++E
Sbjct:   27 RTYSCVHCRAHLAKHDELISKSFQGSHGRAYLFNSVVNVGCGPAEQRLLLTGLHSVADIFCESCKTTLGWKYEQAFETSQKYKEGKYIIE 116          
BLAST of DN617515 vs. ExPASy Swiss-Prot
Match: YPEL4_HUMAN (Protein yippee-like 4 OS=Homo sapiens GN=YPEL4 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.112e-27
Identity = 53/90 (58.89%), Postives = 69/90 (76.67%), Query Frame = -2
Query:  225 KIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKYKEGKSVLE 494
            + YSC HCR HLA  ++++SKSF   HG+AYLF+ VVNV  G  E+RL++TG+H+VADIFC  C + +GWKYE A E SQKYKEGK ++E
Sbjct:   27 RTYSCVHCRAHLAKHDELISKSFQGSHGRAYLFNSVVNVGCGPAEQRLLLTGLHSVADIFCESCKTTLGWKYEQAFETSQKYKEGKYIIE 116          
BLAST of DN617515 vs. ExPASy Swiss-Prot
Match: YPEL4_CERAE (Protein yippee-like 4 OS=Cercopithecus aethiops GN=YPEL4 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.112e-27
Identity = 53/90 (58.89%), Postives = 69/90 (76.67%), Query Frame = -2
Query:  225 KIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKYKEGKSVLE 494
            + YSC HCR HLA  ++++SKSF   HG+AYLF+ VVNV  G  E+RL++TG+H+VADIFC  C + +GWKYE A E SQKYKEGK ++E
Sbjct:   27 RTYSCVHCRAHLAKHDELISKSFQGSHGRAYLFNSVVNVGCGPAEQRLLLTGLHSVADIFCESCKTTLGWKYEQAFETSQKYKEGKYIIE 116          
BLAST of DN617515 vs. ExPASy Swiss-Prot
Match: YIPL6_ARATH (Protein yippee-like At4g27745 OS=Arabidopsis thaliana GN=At4g27745 PE=3 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 8.027e-27
Identity = 52/98 (53.06%), Postives = 73/98 (74.49%), Query Frame = -2
Query:  201 KIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKYKEGKSVLERFKVSGPD 494
            ++YSC +CR H+ L +D++SK+F  R G+A+LFS  +N+ VG KE+R ++TG+HTVADI CV C   +GWKYE A+E SQKYKEGK + E+ K+   D
Sbjct:    8 RLYSCCNCRNHVGLHDDIISKAFQGRTGRAFLFSHAMNIVVGPKEDRNLLTGLHTVADISCVDCNEPLGWKYERAYETSQKYKEGKFIFEKAKIVKED 105          
The following BLAST results are available for this feature:
BLAST of DN617515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
YIPL_SOLTU7.685e-6284.38Protein yippee-like OS=Solanum tuberosum PE=2 SV=1[more]
YIPL3_ARATH6.302e-5677.52Protein yippee-like At3g11230 OS=Arabidopsis thali... [more]
YIPL1_ARATH4.836e-4865.63Protein yippee-like At3g08990 OS=Arabidopsis thali... [more]
YIPL4_ARATH5.005e-4566.67Protein yippee-like At3g55890 OS=Arabidopsis thali... [more]
YIPL7_ARATH1.276e-4060.47Protein yippee-like At5g53940 OS=Arabidopsis thali... [more]
YPEL4_RAT2.112e-2758.89Protein yippee-like 4 OS=Rattus norvegicus GN=Ypel... [more]
YPEL4_MOUSE2.112e-2758.89Protein yippee-like 4 OS=Mus musculus GN=Ypel4 PE=... [more]
YPEL4_HUMAN2.112e-2758.89Protein yippee-like 4 OS=Homo sapiens GN=YPEL4 PE=... [more]
YPEL4_CERAE2.112e-2758.89Protein yippee-like 4 OS=Cercopithecus aethiops GN... [more]
YIPL6_ARATH8.027e-2753.06Protein yippee-like At4g27745 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01E24_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001E24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617515 ID=DN617515; Name=DN617515; organism=Citrus sinensis; type=EST; length=597bp
TTTCAATTAGGTTATTGACAGTGCATTGCATTTGCCGAGCTGCAGCTGAA
TTGAAGAATAACCGAGTTTGAGCATTCACAAGTTGAATGGGAAATTTGAT
GGTTAAAGAATATACAGGTGGAATTGATGGGTAGTAGTCAAGCATCATCT
GCGTCACTTCCGCCAACATGAGCTTCGTGACTTACCCAATAATTGCTTCC
GTCAGGGCCGGAAACCTTAAACCGTTCAAGGACGGATTTCCCTTCCTTGT
ACTTTTGGCTCTTTTCATGGGCAGTCTCGTATTTCCAACCGACAATTGAT
CCACACCCAACACAGAAAATGTCAGCCACTGTATGCATCCCAGTCATCAT
CAATCTCTCCTCTTTCTCTCCAACAGAAACATTCACAACCTTACTGAAGA
GATAAGCTTTCCCATGCCTGCAATGGAAAGACTTAGAGACGACGTCTTCA
CATAAAGCAAGATGGGTCCTGCAGTGCTTGCAGCTATAGATCTTCCCTTC
AAGATTCACCACAAATAGCCTCCCCATAATTCTTCACACTACTCTACCAA
CAGATCTTTGCAGGAAAAAAATACACACAAAATCAAAAATCAAACAA
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