DN617507

Overview
NameDN617507
Unique NameDN617507
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length516
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10109 contig Csv1_Contig10109:1086..1601. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617507 vs. ExPASy Swiss-Prot
Match: FABI_BRANA (Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic OS=Brassica napus PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 2.123e-21
Identity = 50/63 (79.37%), Postives = 54/63 (85.71%), Query Frame = -2
Query:  327 DPMIEYSLANAPSQKELSADEVGNTAAFLASPLASAITGAVIYVDNGLNAMGVGVDSPIFKDL 515
            D MIEYS  NAP QK L+ADEVGN AAFL SPLASAITGA IYVDNGLN+MGV +DSP+FKDL
Sbjct:  321 DTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMGVALDSPVFKDL 383          
The following BLAST results are available for this feature:
BLAST of DN617507 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FABI_BRANA2.123e-2179.37Enoyl-[acyl-carrier-protein] reductase [NADH], chl... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_01E20_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001E20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617507 ID=DN617507; Name=DN617507; organism=Citrus sinensis; type=EST; length=516bp
TTTTGTTTTTTTTTTGGAGTTTAAATTCTCATCCTGGCTCAAAATTCAAA
TTACCTTTGGTATGTTTTATTAGATTGGGAAGCAATCTTACAACTGAATT
GAAGCACAATGAAACCTTGAGTTTAGACGTTCAAACTAAGCACTAACACT
GAAAACACAATTTAAAGTTGTTGACTTGACTAAAAGTTTATACTCAAGCT
CAATCCCTGAAAAGGTAATACAGAAATTCTCACAAGAAAAGGGGTGCCGC
TGACCTAGGTGTCCTATGGAGTGGGGTAGTGCTGATAATCGGGTACCCCC
TTCTAGTGCTTGTCTGTTGGAATGGCAAGGTCTTTAAATATTGGACTGTC
GACTCCGACTCCCATTGCATTCAGACCATTGTCAACATAGATTACAGCAC
CGGTGATGGCGGAGGCCAAAGGTGATGCTAAGAAGGCAGCAGTGTTCCCC
ACCTCATCTGCAGATAATTCTTTCTGCGATGGGGCATTGGCTAATGAATA
TTCAATCATTGGATCA
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