DN617504

Overview
NameDN617504
Unique NameDN617504
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length556
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DN617504 vs. ExPASy Swiss-Prot
Match: YAKC_SCHPO (Aldo-keto reductase yakc [NADP+] OS=Schizosaccharomyces pombe GN=yakc PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 4.925e-17
Identity = 48/101 (47.52%), Postives = 64/101 (63.37%), Query Frame = -3 
Query:  252 ENLGKNKKIYTRVENLAKRHKCTPAQLSLAWLLGQGDDIVPIPGTTKIKNLDENIGSLMMKLTKEDMKEILNFVPIEEVAGDR-TYGGMLKVTWKFTNTPP 551
            EN  KN ++ T++E +A  +  TP QLSLAWLL QGDDI+PIPGT ++K L+EN G+L +KL+   +KEI       EV G R   G   K+   F +TPP
Sbjct:  240 ENFYKNLELVTKIEKIATANNITPGQLSLAWLLAQGDDILPIPGTKRVKYLEENFGALKVKLSDATVKEIREACDNAEVIGARYPPGAGSKI---FMDTPP 337
[Close]
BLAST of DN617504 vs. ExPASy Swiss-Prot
Match: A115_TOBAC (Auxin-induced protein PCNT115 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.652e-12
Identity = 31/55 (56.36%), Postives = 43/55 (78.18%), Query Frame = -3 
Query:  387 ENLGKNKKIYTRVENLAKRHKCTPAQLSLAWLLGQGDDIVPIPGTTKIKNLDENI 551
            ENL  NK +Y R+  +A R  CTP+QL+LAW+  QG+D+ PIPGTTKI+NL++N+
Sbjct:  247 ENLENNKNLYERICEMAVRKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNM 301
The following BLAST results are available for this feature:
BLAST of DN617504 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
YAKC_SCHPO4.925e-1747.52Aldo-keto reductase yakc [NADP+] OS=Schizosaccharo... [more]
A115_TOBAC3.652e-1256.36Auxin-induced protein PCNT115 OS=Nicotiana tabacum... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_01E18_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001E18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617504 ID=DN617504; Name=DN617504; organism=Citrus sinensis; type=EST; length=556bp
TTTTTTTTTTTTTTTTTACTGAAACTTTCTTGAATTCAGGTTGTAACATA
CCAAGAAGATCATTCCTAGTCTTTCTTCGAAGTTTACAGTTATTCATTAA
AAAAAAAGTCTATCACAAAAGCATATAGTTGATAGCTCATAAATTTCGGC
AATAATTAACTTGTAGGCATAAAATATTGCATCCAAACACAAAGTGAGAA
TGTAAGATTGCCTGTATTCCAACTATTTGAAGTTCAGGCCTTGCAGTCTT
TAGGAGGTGTGTTTGTGAACTTCCAGGTCACTTTCAGCATGCCACCATAG
GTTCTGTCTCCAGCTACCTCTTCTATGGGTACAAAATTCAAAATTTCTTT
CATATCCTCCTTTGTAAGTTTCATCATTAAGGAACCAATATTTTCATCCA
AGTTCTTAATCTTAGTCGTCCCAGGAATTGGTACAATATCATCCCCTTGT
CCGAGCAGCCATGCCAGTGATAGCTGCGCAGGAGTGCATTTGTGCCTTTT
AGCAAGGTTCTCTACGCGAGTATAAATCTTCTTGTTCTTTCCCAAGTTCT
CTCCCG
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