DN617500

Overview
NameDN617500
Unique NameDN617500
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length662
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 4.208e-62
Identity = 108/173 (62.43%), Postives = 144/173 (83.24%), Query Frame = -1
Query:  150 EKKKYWQQPGDIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFE--EGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEVIVYGCH 662
            EKKK+WQ+P +I+GFGQAFVVSE+QKLDWAD+F     P  LRKPHLFPKLP+ FRDTLE YS+E++++A  ++ +MA+AL++ P +++ LF+  + VQ MRMNYYPPCPQP  V+GLTPHSD+ GLT+L+Q+N+++GLQIKKDG WVP+K LP+AFI+NIGD LE+I  G +
Sbjct:  113 EKKKFWQRPDEIEGFGQAFVVSEDQKLDWADLFFHTVQPVELRKPHLFPKLPLPFRDTLEMYSSEVQSVAKILIAKMARALEIKPEELEKLFDDVDSVQSMRMNYYPPCPQPDQVIGLTPHSDSVGLTVLMQVNDVEGLQIKKDGKWVPVKPLPNAFIVNIGDVLEIITNGTY 285          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.848e-34
Identity = 75/175 (42.86%), Postives = 108/175 (61.71%), Query Frame = -1
Query:  150 EKKKYWQQPGDIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMD----PNDIKDLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEVIVYGCH 662
            EK  Y Q P  ++G+GQAFV SEEQKLDWADM  + T P   R    +P  P  FR+T+E YS EL+ +A+ +   MAK L ++       ++ +F    +++     P        +GL+PHSDA GLT+L+Q+NE++GL IKKD  WVPIK +  AF++NIGD +E++  G +
Sbjct:  111 EKNAYRQLPNGMEGYGQAFVTSEEQKLDWADMHFLITKPVQERNMRFWPTSPTSFRETMEKYSMELQKVAMCLTGMMAKNLGLESEILTKPLRTVFNREDELL-----PSMSSCGEGLGLSPHSDATGLTLLIQVNEVNGLHIKKDEKWVPIKPILGAFVVNIGDVIEIMSNGIY 280          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.563e-24
Identity = 61/174 (35.06%), Postives = 97/174 (55.75%), Query Frame = -1
Query:  156 EKKKYW--QQPGDIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDL---FEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEVIVYG 662
            EK+KY   Q  G IQG+G     +   +L+W D F     P   R   ++PK P  + +    Y+  LR LA K+   ++  L ++P+ ++      EE +  M++NYYP CPQP+L +G+  H+D   LT +L  N + GLQ+  +G WV  K +PD+ +++IGD LE++  G
Sbjct:  109 EKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNG 281          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 7.758e-24
Identity = 59/174 (33.91%), Postives = 97/174 (55.75%), Query Frame = -1
Query:  156 EKKKYW--QQPGDIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDL---FEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEVIVYG 662
            +K+KY   Q  G IQG+G     +   +L+W D F     P   R   ++P+ P  + +    Y+ +LR LA K+L  ++  L +D   ++      EE +  M++NYYP CPQP+L +G+  H+D   LT +L  N + GLQ+  +G WV  K +P++ +++IGD LE++  G
Sbjct:  113 QKEKYANDQASGKIQGYGSKLANNASGQLEWEDYFFHCVYPEDKRDLSIWPQTPADYIEATAEYAKQLRELATKVLKVLSLGLGLDEGRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYEGKWVTAKCVPNSIVMHIGDTLEILSNG 285          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.028e-23
Identity = 59/174 (33.91%), Postives = 97/174 (55.75%), Query Frame = -1
Query:  156 EKKKYW--QQPGDIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDL---FEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEVIVYG 662
            EK+KY   Q  G++QG+G     S   +L+W D F     P   R   ++PK P  +      Y+ ++R LA KIL  ++  L ++   ++      E+ +  M++NYYP CPQP+L +G+  H+D   LT +L  N + GLQ+  +G WV  K +P++ I++IGD +E++  G
Sbjct:  113 EKEKYANDQANGNVQGYGSKLANSACGQLEWEDYFFHCAFPEDKRDLSIWPKNPTDYTPATSEYAKQIRALATKILTVLSIGLGLEEGRLEKEVGGMEDLLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYEGQWVTAKCVPNSIIMHIGDTIEILSNG 285          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: FLS_PETHY (Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.567e-23
Identity = 57/173 (32.95%), Postives = 97/173 (56.07%), Query Frame = -1
Query:  156 EKKKYWQQPG--DIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLF--EEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEVIVYG 662
            EK+   + PG  DI+G+G +     E K  W D       P        +PK P  +R+  E Y   +R +  +I   ++  L ++ +++ +    +E V ++++NYYPPCP+P L +G+  H+D   +TIL+  NE+ GLQ+ KDG W  +K +P+A I++IGD +E++  G
Sbjct:  112 EKELIAKTPGSNDIEGYGTSLQKEVEGKKGWVDHLFHKIWPPSAVNYRYWPKNPPSYREANEEYGKRMREVVDRIFKSLSLGLGLEGHEMIEAAGGDEIVYLLKINYYPPCPRPDLALGVVAHTDMSYITILVP-NEVQGLQVFKDGHWYDVKYIPNALIVHIGDQVEILSNG 283          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: LDOX_VITVI (Leucoanthocyanidin dioxygenase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.911e-22
Identity = 60/174 (34.48%), Postives = 95/174 (54.60%), Query Frame = -1
Query:  156 EKKKYW--QQPGDIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDL---FEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEVIVYG 662
            EK+KY   Q  G I G+G     +   +L+W D F     P   R   ++PK P  +      YS +LR+LA KIL  ++  L ++   ++      EE +   ++NYYP CPQP+L +G+  H+D   LT +L  N + GLQ+  +G WV  K +P++ I++IGD +E++  G
Sbjct:  115 EKEKYANDQASGKIAGYGSKLANNASGQLEWEDYFFHLIFPEDKRDMTIWPKTPSDYVPATCEYSVKLRSLATKILSVLSLGLGLEEGRLEKEVGGMEELLLQKKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYEGKWVTAKCVPNSIIMHIGDTIEILSNG 287          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: FLS_CITUN (Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.239e-21
Identity = 54/174 (31.03%), Postives = 94/174 (54.02%), Query Frame = -1
Query:  156 EKKKYWQQPGD---IQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLF--EEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEVIVYG 662
            E+K+ + +P D   +QG+G       E K  W D       P        +PK P  +R   E Y+  +R +  K+   ++  L ++   +K+    ++   ++++NYYPPCP+P L +G+  H+D   LT+L+  NE+ GLQ+ KD  W+  K +P+A +I+IGD +E++  G
Sbjct:   98 EEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPKNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGVEGGVLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVP-NEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNG 270          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: ACCO1_DORSP (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Doritaenopsis sp. GN=ACO1 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.239e-21
Identity = 54/152 (35.53%), Postives = 88/152 (57.89%), Query Frame = -1
Query:  156 EEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFEEGVQIM-----RMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDGLWVPIKALPDAFIINIGDALEVIVYG 596
            E + LDW   F +  LPT        P L    R T++ ++ EL NLA ++L  + + L ++   +K +F  G   +     +++ YPPCP+P+L+ GL  H+DAGG+ +L Q +++ GLQ+ KDG W+ +  +  + ++NIGD LEVI  G
Sbjct:   82 EPENLDWESTFFLRHLPT--SNISQIPDLDDDCRSTMKEFALELENLAERLLDLLCEDLGLEKGYLKKVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWIDVPPVRHSIVVNIGDQLEVITNG 231          
BLAST of DN617500 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.618e-21
Identity = 55/163 (33.74%), Postives = 91/163 (55.83%), Query Frame = -1
Query:  180 EKKKYWQQPGDIQGFGQAFVVSEEQKLDWADMFAMYTLPTYLRKPHLFPKLPVHFRDTLESYSAELRNLALKILYQMAKALKMDPNDIKDLFEEGVQIMRMNYYPPCPQPKLVMGLTPHSDAGGLTILLQINEMDGLQIKKDG--LWVPIKALPDAFIINIGD 662
            EK +Y    G   GF  + V+  +  +DW +    ++ P   R    +PK P  +R T E YS +L  L  K+L  +++A+ ++  D+     +  Q + +NYYP CPQP L +G+  H+D G +TILLQ + + GLQ  +DG   W+ ++ +  AF++N+GD
Sbjct:  100 EKLEYDTTGGKRGGFTISTVLQGDDAMDWREFVTYFSYPINARDYSRWPKKPEGWRSTTEVYSEKLMVLGAKLLEVLSEAMGLEKGDLTKACVDMEQKVLINYYPTCPQPDLTLGVRRHTDPGTITILLQ-DMVGGLQATRDGGKTWITVQPVEGAFVVNLGD 261          
The following BLAST results are available for this feature:
BLAST of DN617500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
SRG1_ARATH4.208e-6262.43Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]
NCS1_COPJA4.848e-3442.86S-norcoclaurine synthase 1 OS=Coptis japonica GN=N... [more]
LDOX_ARATH1.563e-2435.06Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]
LDOX_MALDO7.758e-2433.91Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
LDOX_PETHY5.028e-2333.91Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
FLS_PETHY6.567e-2332.95Flavonol synthase/flavanone 3-hydroxylase OS=Petun... [more]
LDOX_VITVI1.911e-2234.48Leucoanthocyanidin dioxygenase OS=Vitis vinifera P... [more]
FLS_CITUN1.239e-2131.03Flavonol synthase/flavanone 3-hydroxylase OS=Citru... [more]
ACCO1_DORSP1.239e-2135.531-aminocyclopropane-1-carboxylate oxidase 1 OS=Dor... [more]
FNSI_PETCR1.618e-2133.74Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01E16_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001E16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617500 ID=DN617500; Name=DN617500; organism=Citrus sinensis; type=EST; length=662bp
TAAGGATTCAATAATTAAAATAAGTTTCAACAAACACCCTCTTGAAGAAA
TCATTAAAAGAGTTTGCATATTCGAAAAATCGAATCAAATTTGAAACCTT
AACTTTGATACCATATTGGATAAACCTCTTGGCCAAAAACTTATAGCAAG
TGACAGCCATAAACTATTACCTCCAAAGCATCACCAATGTTGATAATAAA
AGCATCAGGGAGGGCTTTAATAGGAACCCATAATCCATCTTTCTTTATTT
GAAGGCCATCCATCTCATTGATTTGGAGGAGGATGGTTAGACCTCCGGCA
TCAGAATGAGGAGTAAGGCCCATAACAAGCTTCGGCTGGGGACACGGAGG
ATAGTAATTCATCCTCATTATTTGCACTCCTTCTTCAAACAAATCTTTGA
TATCGTTGGGATCCATTTTTAGAGCTTTTGCCATTTGGTAAAGAATTTTC
AAGGCAAGATTTCTAAGTTCTGCTGAGTAAGATTCCAAGGTATCTCTGAA
ATGGACAGGCAACTTGGGAAATAGATGGGGCTTCCTCAAATAAGTTGGAA
GAGTGTACATAGCAAACATATCTGCCCAATCAAGCTTCTGCTCCTCAGAC
ACAACAAAAGCCTGCCCAAATCCCTGAATATCGCCTGGTTGCTGCCAATA
CTTCTTTTTCTC
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