DN617497
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617497 vs. ExPASy Swiss-Prot
Match: STH_ARATH (Salt tolerance-like protein OS=Arabidopsis thaliana GN=STH PE=1 SV=2) HSP 1 Score: 250.366 bits (638), Expect = 6.064e-66 Identity = 123/175 (70.29%), Postives = 141/175 (80.57%), Query Frame = 3 Query: 129 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFLATGIRVALSS-SCSKDAERNISEPPNQQASQTSVKMPTQQSSSISSPWAVDDFLQFSDFESSGK-KEQLEFGELEWI 647 MKIQCDVCEKAPAT+ICCADEAALCAKCDVEVHAANKLASKHQRL L LS K PPCDIC EKAAFIFCVEDRAL C+DCDE H+P + SANHQRFLATGIRVALSS SC+++ E+N +P NQQ+ K PTQQ ++ S WA D+F +SD + S K KEQL+ GEL+W+ Sbjct: 1 MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDICLEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSSTSCNQEVEKNHFDPSNQQSLS---KPPTQQPAAPSPLWATDEFFSYSDLDCSNKEKEQLDLGELDWL 172
BLAST of DN617497 vs. ExPASy Swiss-Prot
Match: STO_ARATH (Salt tolerance protein OS=Arabidopsis thaliana GN=STO PE=1 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 4.346e-64 Identity = 125/181 (69.06%), Postives = 141/181 (77.90%), Query Frame = 3 Query: 129 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFLATGIRVALSSS-CSKDAERNISEPPN--QQASQTSVKMPTQQ----SSSISSPWAVDDFLQFSDFESSGKKEQLEF--GELEW 644 MKIQCDVCEKAPATVICCADEAALC +CD+E+HAANKLASKHQRL L LS K P CDICQEKAAFIFCVEDRAL C+DCDE IH S SANHQRFLATGI+VAL+S+ CSK+ E+N EP N Q+A+Q K +QQ SS+ PWAVDDF FSD ES+ KK QL+ GEL+W Sbjct: 1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDICQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTSTICSKEIEKNQPEPSNNQQKANQIPAKSTSQQQQQPSSATPLPWAVDDFFHFSDIESTDKKGQLDLGAGELDW 181
BLAST of DN617497 vs. ExPASy Swiss-Prot
Match: STHY_ARATH (Probable salt tolerance-like protein At1g78600 OS=Arabidopsis thaliana GN=At1g78600 PE=1 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 3.588e-34 Identity = 79/201 (39.30%), Postives = 106/201 (52.74%), Query Frame = 3 Query: 129 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFLATGIRVALSS--------SCSKDAERNISEPPNQQA-------------------------------SQTSVKMPTQQSSSISS---PWAVDDFLQFSDFESS 605 MKIQC+VCE A ATV+CCADEAALC CD ++HAANKLA KHQR+ L ++ +P CDICQE + F FC++DRAL C+ CD IH+ + HQRFL TGI+V L S S + ++ + P Q+ QTS K+P S S + W +++ +DF+ S Sbjct: 1 MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDICQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTKSSPTNDDKTMETKPFVQSIPEPQKMAFDHHHHQQQQEQQEGVIPGTKVNDQTSTKLPLVSSGSTTGSIPQWQIEEIFGLTDFDQS 201
BLAST of DN617497 vs. ExPASy Swiss-Prot
Match: STHX_ARATH (Probable salt tolerance-like protein At1g75540 OS=Arabidopsis thaliana GN=At1g75540 PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.849e-31 Identity = 69/150 (46.00%), Postives = 92/150 (61.33%), Query Frame = 3 Query: 129 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQR--LLLQCLSNKLPP-CDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFLATGIRVALSSSCSKDAERNISEPPNQQ---ASQTSVKMPTQQSSSISSP 560 MKI+CDVC+K A+V C ADEA+LC CD +VH ANKLASKH R LL SN P CDICQ+K A +FC +DRA+ CKDCD IH+ + H RFL TG++++ +SS K ++ S + Q +S+ P +S+P Sbjct: 1 MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLCDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKSSSSSSSNQDFSVPGSSISNPPPLKKPLSAP 150
BLAST of DN617497 vs. ExPASy Swiss-Prot
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.258e-19 Identity = 57/173 (32.95%), Postives = 85/173 (49.13%), Query Frame = 3 Query: 141 CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQR--FLATGIRVALSSSCSKDAERNISEPPNQ-----------QASQTSVKMPTQ-QSSSISSPWAV-DDFLQFSDFESSGKK 614 CD C A TV C AD A LC+ CD +VHAAN+LAS+H+R+ + C C+ A FC D A C CD IHS L+ HQR L S++ + E +++P N+ +A S +P ++S ++ +++ D+FL D+ SS K+ Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRV---------CQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPILPISEYSYSSTATNHSCETTVTDPENRLVLGQEEEDEDEAEAASWLLPNSGKNSGNNNGFSIGDEFLNLVDYSSSDKQ 175
BLAST of DN617497 vs. ExPASy Swiss-Prot
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.160e-16 Identity = 43/113 (38.05%), Postives = 59/113 (52.21%), Query Frame = 3 Query: 141 CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFLATGIRVALSSSCSKDAERN 479 CD C+ AT+ C AD A LC CD ++H ANKLAS+H+R+ L C++C++ A + C D A C CD IHS LS H+R T A+ + S + N Sbjct: 8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWL---------CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPAKSASSSVN 111
BLAST of DN617497 vs. ExPASy Swiss-Prot
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.374e-16 Identity = 53/169 (31.36%), Postives = 75/169 (44.38%), Query Frame = 3 Query: 141 CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFLATGIRVALSSSCSKDAERNISEPPNQQASQTSVKMPTQQSSSISSPWAVDDFLQFSDFESSGKKEQLEFGELEWI 647 CD C+ A A + C D A LC CD +VHAANKLAS+H R+ + C++C++ A + C D A C CD IHS L+ H+R T ++SS S T+V +DD FSD + +G +E+ E W+ Sbjct: 6 CDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWM---------CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSDGS--------------VKHTAVNF-------------LDD-CYFSDIDGNGSREEEEEEAASWL 137
BLAST of DN617497 vs. ExPASy Swiss-Prot
Match: COL2_ARATH (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.730e-15 Identity = 44/110 (40.00%), Postives = 54/110 (49.09%), Query Frame = 3 Query: 141 CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFLATGIRVALSSSCSKDA 470 CD C A TV C AD A LC CD VHAAN++AS+H+R+ + C C+ A C D A C CD IHS L+ HQR I ++SCS A Sbjct: 16 CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRV---------CQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQR---VPILPLSANSCSSMA 113
BLAST of DN617497 vs. ExPASy Swiss-Prot
Match: CONS_ARATH (Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.418e-14 Identity = 36/92 (39.13%), Postives = 48/92 (52.17%), Query Frame = 3 Query: 141 CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQR 416 CD C TV C AD A LC CD +VH+AN++AS+H+R+ + C+ C+ A C D A C CD +HS L+ HQR Sbjct: 20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRV---------CESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQR 102
BLAST of DN617497 vs. ExPASy Swiss-Prot
Match: COL13_ARATH (Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana GN=COL13 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.956e-13 Identity = 35/85 (41.18%), Postives = 48/85 (56.47%), Query Frame = 3 Query: 141 CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDICQEKAAFIFCVEDRALFCKDCDEPIHSPGS 395 CD C+ + A V C AD A LC CD +VH AN+L +KH R LL CD C E + +FC +R++ C++CD H+ S Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLL---------CDSCNESPSSLFCETERSVLCQNCDWQHHTASS 88 The following BLAST results are available for this feature:
BLAST of DN617497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617497 ID=DN617497; Name=DN617497; organism=Citrus sinensis; type=EST; length=648bpback to top |