DN617495

Overview
NameDN617495
Unique NameDN617495
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13481 contig Csv1_Contig13481:649..1493. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of DN617495 vs. ExPASy Swiss-Prot
Match: B2_DAUCA (B2 protein OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 1.982e-79
Identity = 138/149 (92.62%), Postives = 146/149 (97.99%), Query Frame = -3 
Query:  298 DKRFKTLPPSEALPRHETIGGYIFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIFEAASFGGTNIDPTAWEDKKCPGESRFPAQVRVVTRKICEPLEEDSFRPILHHYDGPKFRLELNVPEAISLLDIFEE 744
            +KRFKTLPP+E+LPR+ET+GGYIFVCNNDTM ENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHG+FEAASFGGTNIDPTAWEDKK  GESRFPAQVRV+TRKICEPLEEDSFRPILHHYDGPKFRLELN+PEAISLLDIFEE
Sbjct:   56 EKRFKTLPPAESLPRNETVGGYIFVCNNDTMQENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGVFEAASFGGTNIDPTAWEDKKNQGESRFPAQVRVMTRKICEPLEEDSFRPILHHYDGPKFRLELNIPEAISLLDIFEE 204
The following BLAST results are available for this feature:
BLAST of DN617495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
B2_DAUCA1.982e-7992.62B2 protein OS=Daucus carota PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_01E13_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001E13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617495 ID=DN617495; Name=DN617495; organism=Citrus sinensis; type=EST; length=845bp
TTTATAATTTGCTCTTATTTATGTATAAGCTAAAACAAAAGAACAAAAAG
GACAACACACAACAACAGCCTCCTCACAAAATGTTTACATCAAGGACACT
GTGCATATTCAGCTCTCATACTTCCCCTCACATACTCTCTCTAAACTATC
AATATAATGAAGGCCACAAACTCTTAAATTCTTTCCCTATTTGTATCATC
AAACCACTTTTATGCTGTGTAACTTCACTAACTGGTACTTGTATCTGTAA
GCTTTTGTTTCATATGGTTGTATTGCAGCAATTGCTCAAGAGTCTTGTTC
TTCAAATATGTCCAAGAGAGAAATTGCCTCAGGCACATTTAGTTCAAGGC
GGAACTTGGGGCCATCATAGTGATGGAGAATTGGCCTGAAGGAATCCTCT
TCAAGCGGTTCACAGATTTTCCGTGTAACAACCCGGACCTGAGCTGGGAA
TCGTGATTCGCCAGGGCATTTCTTGTCTTCCCAGGCTGTAGGATCAATAT
TTGTGCCTCCAAAGCTAGCAGCCTCAAAAATTCCATGCAGCTGGTGGGTG
GAATAGTTATAAAGGAAAAGGGGCAAGCCAGGGGTTATAGCTCTCACCGA
ATCCCTGTAACGTGGTGGCAATCCAAAGAGCTGTCTTTTGAGATTCTCAG
CCATGGTATCATTGTTACAGACAAAAATATAGCCACCAATGGTTTCGTGT
CTCGGCAAAGCCTCCGAGGGTGGGAGAGTCTTGAACCTCTTATCAGCAGC
AGTCTTAGTGTCCTTATTATCGGAATTATTGTCACCATCTTTGTTATTGT
TCTTCTTTGTGCTGTTCTTCTTGCCACTCTTGCTTCAAGTCCATG
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