DN617471

Overview
NameDN617471
Unique NameDN617471
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length803
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12590 contig Csv1_Contig12590:36..838. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617471 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 393.275 bits (1009), Expect = 8.441e-109
Identity = 180/232 (77.59%), Postives = 198/232 (85.34%), Query Frame = 1
Query:  109 RGTFGDYGGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKT-GWQAMSRNWGQNWQSNSYLNGPSLSFQVTASDGRTVTSNHVVPANWQFGQTFEGG 801
            +GT GD  GGWQ GHATFY              YGNLY QGYGTNTAALSTALFNNGL+CG+CYEMKC +DP+WCL  +I VTATNFCPPN  LSNDNGGWCNPPLQHFD+AEPAFLQIAQYRAGIVP+SFRR+PC KKGGIRFT+NGHSYFNLVL++NVGGAGDVH+VSIKGSKT  WQAMSRNWGQNWQSNSY+N  SLSFQVT SDGRT+ SN V P+NWQFGQT++GG
Sbjct:   21 QGTHGD-DGGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTAALSTALFNNGLTCGACYEMKCNDDPRWCLGSTITVTATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQSWQAMSRNWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNWQFGQTYQGG 251          
BLAST of DN617471 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1)

HSP 1 Score: 380.178 bits (975), Expect = 7.394e-105
Identity = 168/225 (74.67%), Postives = 193/225 (85.78%), Query Frame = 1
Query:  127 YGGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGPSLSFQVTASDGRTVTSNHVVPANWQFGQTFEGG 801
            YGGGW + HATFY              YGNLYSQGYGT+TAALSTALFNNGLSCGSC+E++CEND KWCLPGSI+VTATNFCPPN AL+N+NGGWCNPPL+HFD+A+P F +IAQYRAGIVP+S+RR+PC ++GGIRFT+NGHSYFNLVL+TNVGGAGDVHS +IKGS+T WQAMSRNWGQNWQSNSYLNG +LSF+VT SDGRTV S +  PA W +GQTF GG
Sbjct:   22 YGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNPPLEHFDLAQPVFQRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIKGSRTVWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGWSYGQTFAGG 246          
BLAST of DN617471 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 378.637 bits (971), Expect = 2.151e-104
Identity = 176/235 (74.89%), Postives = 190/235 (80.85%), Query Frame = 1
Query:  103 CF--RGTFGDYGGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGPSLSFQVTASDGRTVTSNHVVPANWQFGQTFEGG 801
            CF  R    DYG  WQS HATFY              YGNLYS GYGTNTAALST LFN+G +CGSCYE++C+ND +WCLPGS+ VTATN CPPN AL ND+GGWCNPP  HFDMAEPAFLQI  YRAGIVP+S+RR+PC KKGGIRFT+NGHSYFNLVLVTNV G GDV SVSIKGS TGWQ MSRNWGQNWQSNSYL+G SLSFQV  SDGRTVTSN+VVPA WQFGQTFEGG
Sbjct:   16 CFLARRAAADYGS-WQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTVLFNDGAACGSCYELRCDNDGQWCLPGSVTVTATNLCPPNYALPNDDGGWCNPPRPHFDMAEPAFLQIGVYRAGIVPVSYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGPGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSYLDGQSLSFQVAVSDGRTVTSNNVVPAGWQFGQTFEGG 249          
BLAST of DN617471 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 373.629 bits (958), Expect = 6.921e-103
Identity = 172/223 (77.13%), Postives = 187/223 (83.86%), Query Frame = 1
Query:  133 GGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGPSLSFQVTASDGRTVTSNHVVPANWQFGQTFEGG 801
            GGWQS HATFY              YGNLYSQGYGTNTAALSTALFN+G +CGSCYE++C+N    CLPGSI VTATNFCPPN  L +D+GGWCNPP  HFDMAEPAFL IAQYRAGIVP+SFRR+PC KKGG+RFTVNGHSYFNLVLVTNV GAGDV SVSIKGS+TGWQ MSRNWGQNWQSN++L+G SLSFQVTASDGRTVTSN+V    WQFGQTFEGG
Sbjct:   22 GGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQTFEGG 244          
BLAST of DN617471 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 373.629 bits (958), Expect = 6.921e-103
Identity = 172/223 (77.13%), Postives = 187/223 (83.86%), Query Frame = 1
Query:  133 GGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGPSLSFQVTASDGRTVTSNHVVPANWQFGQTFEGG 801
            GGWQS HATFY              YGNLYSQGYGTNTAALSTALFN+G +CGSCYE++C+N    CLPGSI VTATNFCPPN  L +D+GGWCNPP  HFDMAEPAFL IAQYRAGIVP+SFRR+PC KKGG+RFTVNGHSYFNLVLVTNV GAGDV SVSIKGS+TGWQ MSRNWGQNWQSN++L+G SLSFQVTASDGRTVTSN+V    WQFGQTFEGG
Sbjct:   22 GGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQTFEGG 244          
BLAST of DN617471 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1)

HSP 1 Score: 372.859 bits (956), Expect = 1.181e-102
Identity = 164/226 (72.57%), Postives = 190/226 (84.07%), Query Frame = 1
Query:  121 GDYGGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGPSLSFQVTASDGRTVTSNHVVPANWQFGQTFEG 798
            G  GGGW + HATFY              YGNLYSQGYGTNTAALSTALFNNGLSCG+C+E++C+ND KWCLPGSI+VTATNFCPPN AL N+ GGWCNPP QHFD+++P F +IAQYRAGIVP+++RR+PC ++GGIRFT+NGHSYFNLVL+TNVGGAGDVHS  +KGS+TGWQAMSRNWGQNWQSNSYLNG SLSF+VT SDG+T+ SN+V  A W FGQTF G
Sbjct:   21 GYAGGGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRCQNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQYRAGIVPVAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAMVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGQTIVSNNVANAGWSFGQTFTG 246          
BLAST of DN617471 vs. ExPASy Swiss-Prot
Match: EXPA2_ARATH (Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 367.851 bits (943), Expect = 3.798e-101
Identity = 166/234 (70.94%), Postives = 193/234 (82.48%), Query Frame = 1
Query:  103 CFRGTFGDYGGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTG-WQAMSRNWGQNWQSNSYLNGPSLSFQVTASDGRTVTSNHVVPANWQFGQTFEGG 801
            C      D  GGW+ GHATFY              YGNL+SQGYG  TAALSTALFN+G  CG+C+E++CE+DP+WC+PGSIIV+ATNFCPPN AL+NDNGGWCNPPL+HFD+AEPAFLQIAQYRAGIVP++FRR+PC K GGIRFT+NG+ YF+LVL+TNVGGAGD+ +VS+KGSKT  WQ+MSRNWGQNWQSN+YL G SLSFQVT SDGRTV S  VVP +WQFGQTFEGG
Sbjct:   20 CLYSINSDDNGGWERGHATFYGGADASGTMGGACGYGNLHSQGYGLQTAALSTALFNSGQKCGACFELQCEDDPEWCIPGSIIVSATNFCPPNFALANDNGGWCNPPLKHFDLAEPAFLQIAQYRAGIVPVAFRRVPCEKGGGIRFTINGNPYFDLVLITNVGGAGDIRAVSLKGSKTDQWQSMSRNWGQNWQSNTYLRGQSLSFQVTDSDGRTVVSYDVVPHDWQFGQTFEGG 253          
BLAST of DN617471 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 365.155 bits (936), Expect = 2.462e-100
Identity = 160/224 (71.43%), Postives = 189/224 (84.38%), Query Frame = 1
Query:  127 YGGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGPSLSFQVTASDGRTVTSNHVVPANWQFGQTFEG 798
            Y  GW + HATFY              YGNLYSQGYGTNTAALSTALFNNGLSCG+C+E+KC++D  WCLPG+IIVTATNFCPPN AL N+ GGWCNPPL HFD+++P F +IAQY+AG+VP+S+RR+PC ++GGIRFT+NGHSYFNLVLVTNVGGAGDVHSV++KGS+T WQ MSRNWGQNWQSN+ LNG +LSF+VTASDGRTV SN++ PA+W FGQTF G
Sbjct:   26 YDAGWVNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCQSDGAWCLPGAIIVTATNFCPPNNALPNNAGGWCNPPLHHFDLSQPVFQRIAQYKAGVVPVSYRRVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVKGSRTRWQQMSRNWGQNWQSNNLLNGQALSFKVTASDGRTVVSNNIAPASWSFGQTFTG 249          
BLAST of DN617471 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1)

HSP 1 Score: 348.206 bits (892), Expect = 3.114e-95
Identity = 155/225 (68.89%), Postives = 184/225 (81.78%), Query Frame = 1
Query:  130 GGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGS--IIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGPSLSFQVTASDGRTVTSNHVVPANWQFGQTFEG 798
            GG WQ+ HATFY              YGNLYSQGYGTNTAALSTALFNNG+SCG+C+E+KC NDP+WC  GS  I++TATNFCPPNLA  +DNGGWCNPP +HFD+A P FL+IAQYRAGIVP+S+RR+PC K+GGIRFT+NGH YFNLVL+TNV GAGD+   S+KGS+TGW ++SRNWGQNWQSN+ L G +LSF+VT SD RT TS ++VP+NWQFGQTF G
Sbjct:   28 GGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNWQFGQTFVG 252          
BLAST of DN617471 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 342.428 bits (877), Expect = 1.709e-93
Identity = 154/225 (68.44%), Postives = 180/225 (80.00%), Query Frame = 1
Query:  130 GGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPG--SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGPSLSFQVTASDGRTVTSNHVVPANWQFGQTFEG 798
            GG WQ+ HATFY              YGNLYSQGYGTNTAALST+LFN+G SCG+C+E+KC NDPKWC PG  S+ VTATNFCPPNLA  +DNGGWCNPP  HFD+A P FL+IA+YRAGIVPIS+RR+ C K GGIRFT+NGH YFNLVL+TNV GAGD+   S+KGSKTGW +++RNWGQNWQSN+ L G SLSF+VT+SD RT TS ++ P+NWQFGQTF G
Sbjct:   31 GGSWQTAHATFYGGNDASGTMGGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNWQFGQTFVG 255          
The following BLAST results are available for this feature:
BLAST of DN617471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
EXPA8_ARATH8.441e-10977.59Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 ... [more]
EXP10_ARATH7.394e-10574.67Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=... [more]
EXPA2_ORYSJ2.151e-10474.89Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA4_ORYSJ6.921e-10377.13Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA4_ORYSI6.921e-10377.13Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4... [more]
EXPA1_ARATH1.181e-10272.57Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 ... [more]
EXPA2_ARATH3.798e-10170.94Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 ... [more]
EXP15_ARATH2.462e-10071.43Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=... [more]
EXPA4_ARATH3.114e-9568.89Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 ... [more]
EXP16_ARATH1.709e-9368.44Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01E01_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617471 ID=DN617471; Name=DN617471; organism=Citrus sinensis; type=EST; length=803bp
CTTAACAAAAAAACACATAAACATAAGCAGCCAGCAGTAGCAGCCATGGC
CAATATTGCAGCATCATCTAGCGTTGCTCTCCTTTTGTTTGTGCTCAATT
TTTGCTTTCGTGGCACATTTGGAGACTATGGTGGTGGGTGGCAAAGTGGC
CATGCAACTTTCTATGGCGGGGGTGATGCTTCCGGCACAATGGGTGGTGC
TTGTGGGTATGGCAATTTGTACAGCCAAGGCTATGGGACTAACACTGCAG
CACTTAGTACCGCTCTATTCAACAATGGCCTAAGCTGTGGTTCATGCTAT
GAAATGAAATGTGAAAATGACCCCAAGTGGTGCCTCCCCGGCTCCATCAT
TGTCACCGCCACCAACTTCTGCCCACCTAACCTTGCCCTGTCTAACGACA
ACGGCGGTTGGTGCAATCCTCCCCTCCAGCACTTTGACATGGCTGAGCCC
GCTTTCTTGCAAATTGCCCAATACCGCGCCGGCATCGTCCCAATTTCCTT
CAGAAGGATCCCGTGTGCGAAGAAAGGAGGAATAAGGTTTACCGTCAATG
GACACTCATACTTCAACCTGGTTTTGGTCACAAATGTCGGAGGAGCAGGA
GATGTACATTCAGTATCAATCAAGGGTTCAAAGACTGGATGGCAAGCAAT
GTCAAGGAACTGGGGCCAAAATTGGCAGAGCAATTCTTATCTTAACGGCC
CAAGTCTTTCTTTCCAAGTGACAGCCAGTGACGGCAGGACTGTGACTAGC
AACCATGTTGTGCCTGCAAATTGGCAATTTGGGCAAACCTTTGAGGGTGG
TCA
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