DN617469
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617469 vs. ExPASy Swiss-Prot
Match: PRS4B_ARATH (26S proteasome regulatory subunit 4 homolog B OS=Arabidopsis thaliana GN=RPT2B PE=2 SV=1) HSP 1 Score: 257.684 bits (657), Expect = 2.427e-68 Identity = 133/158 (84.18%), Postives = 137/158 (86.71%), Query Frame = 2 Query: 50 MGQGTPGGLNRQXXXXXXXXXXXXXXXXXFEPAAPPARVGRKQRKQKGPEAAARLPTVTPLSKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDRDQLEPGCAILM 523 MGQG GGLNRQ FEPAAPPARVGRKQRKQKGPEAAARLPTVTP +KCKLRLLKLERIKDYLLMEEEFV NQERLKPQEEKAEEDRSKVDDLRG+PMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVD+DQLEPGC+ILM Sbjct: 1 MGQGPSGGLNRQGDRKPDGGEKKEKK---FEPAAPPARVGRKQRKQKGPEAAARLPTVTPSTKCKLRLLKLERIKDYLLMEEEFVANQERLKPQEEKAEEDRSKVDDLRGTPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILM 155
BLAST of DN617469 vs. ExPASy Swiss-Prot
Match: PRS4A_ARATH (26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis thaliana GN=RPT2A PE=2 SV=1) HSP 1 Score: 257.684 bits (657), Expect = 2.427e-68 Identity = 133/158 (84.18%), Postives = 137/158 (86.71%), Query Frame = 2 Query: 50 MGQGTPGGLNRQXXXXXXXXXXXXXXXXXFEPAAPPARVGRKQRKQKGPEAAARLPTVTPLSKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDRDQLEPGCAILM 523 MGQG GGLNRQ FEPAAPPARVGRKQRKQKGPEAAARLPTVTP +KCKLRLLKLERIKDYLLMEEEFV NQERLKPQEEKAEEDRSKVDDLRG+PMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVD+DQLEPGC+ILM Sbjct: 1 MGQGPSGGLNRQGDRKPDGGDKKEKK---FEPAAPPARVGRKQRKQKGPEAAARLPTVTPSTKCKLRLLKLERIKDYLLMEEEFVANQERLKPQEEKAEEDRSKVDDLRGTPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILM 155
BLAST of DN617469 vs. ExPASy Swiss-Prot
Match: PRS4_ORYSJ (26S protease regulatory subunit 4 homolog OS=Oryza sativa subsp. japonica GN=TBP2 PE=2 SV=2) HSP 1 Score: 236.113 bits (601), Expect = 7.562e-62 Identity = 119/160 (74.38%), Postives = 132/160 (82.50%), Query Frame = 2 Query: 50 MGQGTPGGLNRQXXXXXXXXXXXXXXXXX--FEPAAPPARVGRKQRKQKGPEAAARLPTVTPLSKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDRDQLEPGCAILM 523 MGQGTPGG+ +Q FEP A P+RVGRKQRKQKGPEAAARLP V PLSKC+LRLLKLER+KDYLLMEEEFV QERL+P E+K EEDRSKVDDLRG+PMSVG+LEE+IDE+HAIVSSSVGPEYYVGILSFVD+DQLEPGC+ILM Sbjct: 1 MGQGTPGGMGKQGGAPGDRKPGGDGDKKDRKFEPPAAPSRVGRKQRKQKGPEAAARLPNVAPLSKCRLRLLKLERVKDYLLMEEEFVAAQERLRPTEDKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILM 160
BLAST of DN617469 vs. ExPASy Swiss-Prot
Match: PRS4_DROME (26S protease regulatory subunit 4 OS=Drosophila melanogaster GN=Pros26.4 PE=1 SV=2) HSP 1 Score: 198.364 bits (503), Expect = 1.747e-50 Identity = 93/129 (72.09%), Postives = 117/129 (90.70%), Query Frame = 2 Query: 137 FEPAAPPARVGRKQRKQKGPEAAARLPTVTPLSKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDRDQLEPGCAILM 523 +EP P RVG+K+R+ KGP+AA +LP VTP ++C+L+LLKLERIKDYL+ME+EF+ NQERLKPQ+EK EE+RSKVDDLRG+PMSVGNLEE+ID+NHAIVS+SVG E+YV ILSFVD+DQLEPGC++L+ Sbjct: 24 YEPPIP-TRVGKKKRRAKGPDAAMKLPQVTPHTRCRLKLLKLERIKDYLMMEDEFIRNQERLKPQDEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLL 151
BLAST of DN617469 vs. ExPASy Swiss-Prot
Match: PRS4_RAT (26S protease regulatory subunit 4 OS=Rattus norvegicus GN=Psmc1 PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 9.588e-49 Identity = 91/129 (70.54%), Postives = 115/129 (89.15%), Query Frame = 2 Query: 137 FEPAAPPARVGRKQRKQKGPEAAARLPTVTPLSKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDRDQLEPGCAILM 523 +EP P RVG+K++K KGP+AA++LP VTP ++C+L+LLKLERIKDYLLMEEEF+ NQE++KP EEK EE+RSKVDDLRG+PMSVG LEE+ID+NHAIVS+SVG E+YV ILSFVD+D LEPGC++L+ Sbjct: 25 YEPPVP-TRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLL 152
BLAST of DN617469 vs. ExPASy Swiss-Prot
Match: PRS4_MOUSE (26S protease regulatory subunit 4 OS=Mus musculus GN=Psmc1 PE=1 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 9.588e-49 Identity = 91/129 (70.54%), Postives = 115/129 (89.15%), Query Frame = 2 Query: 137 FEPAAPPARVGRKQRKQKGPEAAARLPTVTPLSKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDRDQLEPGCAILM 523 +EP P RVG+K++K KGP+AA++LP VTP ++C+L+LLKLERIKDYLLMEEEF+ NQE++KP EEK EE+RSKVDDLRG+PMSVG LEE+ID+NHAIVS+SVG E+YV ILSFVD+D LEPGC++L+ Sbjct: 25 YEPPVP-TRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLL 152
BLAST of DN617469 vs. ExPASy Swiss-Prot
Match: PRS4_HUMAN (26S protease regulatory subunit 4 OS=Homo sapiens GN=PSMC1 PE=1 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 9.588e-49 Identity = 91/129 (70.54%), Postives = 115/129 (89.15%), Query Frame = 2 Query: 137 FEPAAPPARVGRKQRKQKGPEAAARLPTVTPLSKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDRDQLEPGCAILM 523 +EP P RVG+K++K KGP+AA++LP VTP ++C+L+LLKLERIKDYLLMEEEF+ NQE++KP EEK EE+RSKVDDLRG+PMSVG LEE+ID+NHAIVS+SVG E+YV ILSFVD+D LEPGC++L+ Sbjct: 25 YEPPVP-TRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLL 152
BLAST of DN617469 vs. ExPASy Swiss-Prot
Match: PRS4_CHICK (26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 6.215e-48 Identity = 90/129 (69.77%), Postives = 114/129 (88.37%), Query Frame = 2 Query: 137 FEPAAPPARVGRKQRKQKGPEAAARLPTVTPLSKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDRDQLEPGCAILM 523 +EP P RVG+K++K KGP+AA++ P VTP ++C+L+LLKLERIKDYLLMEEEF+ NQE++KP EEK EE+RSKVDDLRG+PMSVG LEE+ID+NHAIVS+SVG E+YV ILSFVD+D LEPGC++L+ Sbjct: 25 YEPPVP-TRVGKKKKKTKGPDAASKPPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLL 152
BLAST of DN617469 vs. ExPASy Swiss-Prot
Match: PRS4_CAEEL (Probable 26S protease regulatory subunit 4 OS=Caenorhabditis elegans GN=rpt-2 PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 3.410e-46 Identity = 81/123 (65.85%), Postives = 113/123 (91.87%), Query Frame = 2 Query: 155 PARVGRKQRKQKGPEAAARLPTVTPLSKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDRDQLEPGCAILM 523 P+R+G+K++ KGP+AA++LP VTP ++C+L+LLK ERIKDYLLME+EF+ NQERLKPQEE+ EE+R+KVD+LRG+PM+VG+LEE+ID+ HAIVS++VG E+YV I+SFVD++QLEPGC++L+ Sbjct: 33 PSRIGKKKKGSKGPDAASKLPAVTPHARCRLKLLKSERIKDYLLMEQEFIQNQERLKPQEERQEEERAKVDELRGTPMAVGSLEEIIDDQHAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLL 155
BLAST of DN617469 vs. ExPASy Swiss-Prot
Match: PRS4_SCHPO (26S protease regulatory subunit 4 homolog OS=Schizosaccharomyces pombe GN=mts2 PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 9.286e-44 Identity = 79/129 (61.24%), Postives = 111/129 (86.05%), Query Frame = 2 Query: 137 FEPAAPPARVGRKQRKQKGPEAAARLPTVTPLSKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDRDQLEPGCAILM 523 +EP P RK++ Q GP+A+A+LPTV P ++C+LRLLK++RI D+LLMEEE+V NQERLKPQ+E+ +E+R++VD++RG+PMSVG LEE+ID++HAIVS++ GPEYYV I+SFVD+D LEPGC++L+ Sbjct: 31 YEPPVPTRTGRRKKKAQSGPDASAKLPTVIPTTRCRLRLLKMQRIHDHLLMEEEYVQNQERLKPQDERTQEERNRVDEIRGTPMSVGTLEEIIDDDHAIVSTA-GPEYYVSIMSFVDKDMLEPGCSVLL 158 The following BLAST results are available for this feature:
BLAST of DN617469 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617469 ID=DN617469; Name=DN617469; organism=Citrus sinensis; type=EST; length=524bpback to top |