DN617467

Overview
NameDN617467
Unique NameDN617467
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length508
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617467 vs. ExPASy Swiss-Prot
Match: PI3K_ARATH (Phosphatidylinositol 3-kinase VPS34 OS=Arabidopsis thaliana GN=At1g60490 PE=2 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 2.426e-38
Identity = 75/107 (70.09%), Postives = 88/107 (82.24%), Query Frame = 3
Query:  186 MSGNEFRFFLSCDINLPVKFRVDRLEGTLPSIKSPNSVNDRSGINSTTEERRPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALT 506
            M  NEFRFFLSCDIN PV FR+++L+G LP  KS +S     G+ S  EE++PELY+ECALYIDGAPFGLPMRTRL++ GP YCWNE ITLS+KYRDLTAHSQLA+T
Sbjct:    1 MGANEFRFFLSCDINSPVTFRIEKLDGNLPVKKSSDS-----GVVSIAEEKKPELYIECALYIDGAPFGLPMRTRLKTTGPPYCWNELITLSSKYRDLTAHSQLAIT 102          
BLAST of DN617467 vs. ExPASy Swiss-Prot
Match: PI3K2_SOYBN (Phosphatidylinositol 3-kinase, nodule isoform OS=Glycine max PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 3.168e-38
Identity = 77/107 (71.96%), Postives = 87/107 (81.31%), Query Frame = 3
Query:  186 MSGNEFRFFLSCDINLPVKFRVDRLEGTLPSIKSPNSVNDRSGINSTTEERRPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALT 506
            M+GNEFRFFLSCDI++PV FRV+RLEG LP  KSP+  N     N+ T+ R  EL+VECALYIDGAPFGLPMRTRLES+GP YCWNE ITL+TKYRDLTA SQL  T
Sbjct:    1 MTGNEFRFFLSCDISVPVTFRVERLEGNLPLPKSPDLEN-----NAPTDNRTTELFVECALYIDGAPFGLPMRTRLESLGPSYCWNELITLTTKYRDLTAQSQLTFT 102          
BLAST of DN617467 vs. ExPASy Swiss-Prot
Match: PI3K1_SOYBN (Phosphatidylinositol 3-kinase, root isoform OS=Glycine max PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 2.965e-36
Identity = 75/107 (70.09%), Postives = 83/107 (77.57%), Query Frame = 3
Query:  186 MSGNEFRFFLSCDINLPVKFRVDRLEGTLPSIKSPNSVNDRSGINSTTEERRPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALT 506
            M+GNEFRFFLSCDI++PV FRV+RLEG LP    PN  +     N+ TE R  EL+VECALYIDGAPFGLP RTRLES GP YCWNE ITL+TKYRDLTA SQL  T
Sbjct:    1 MTGNEFRFFLSCDISVPVTFRVERLEGNLPL---PNPKSPDLETNAPTENRTKELFVECALYIDGAPFGLPTRTRLESSGPSYCWNELITLTTKYRDLTAQSQLTFT 104          
The following BLAST results are available for this feature:
BLAST of DN617467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
PI3K_ARATH2.426e-3870.09Phosphatidylinositol 3-kinase VPS34 OS=Arabidopsis... [more]
PI3K2_SOYBN3.168e-3871.96Phosphatidylinositol 3-kinase, nodule isoform OS=G... [more]
PI3K1_SOYBN2.965e-3670.09Phosphatidylinositol 3-kinase, root isoform OS=Gly... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_01D23_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001D23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617467 ID=DN617467; Name=DN617467; organism=Citrus sinensis; type=EST; length=508bp
CAATTTTTTATTGTTTTTGGAAAATAATGCAATACCGGTTCATCTTCATC
GTCTGAGTTTGTGTGTTTTCCACGCCAACTCGCCTGAAACTTTAGCGCGA
TTATCAACACTCTTAACATTTAACAATCCATTAGAGAAACCCTAGATTAT
GATAATTCGCAGCTCGTGAAAGCCAAAAAGAAGCGATGAGCGGAAACGAG
TTCAGATTCTTCTTGTCTTGCGACATCAATCTTCCTGTAAAATTTCGCGT
CGACAGATTGGAAGGAACTTTGCCTTCCATAAAGTCCCCCAATTCAGTCA
ATGATCGTTCTGGAATTAATTCCACCACAGAGGAGAGAAGACCGGAGCTA
TATGTTGAGTGTGCATTGTACATTGATGGTGCGCCATTTGGCCTTCCAAT
GAGAACGAGGTTGGAATCTATGGGACCAATGTATTGCTGGAATGAGCCTA
TTACATTGAGTACTAAATATCGGGACTTAACTGCACATTCACAACTTGCT
TTAACTGT
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