DN617463

Overview
NameDN617463
Unique NameDN617463
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length566
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10157 contig Csv1_Contig10157:673..1238. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of DN617463 vs. ExPASy Swiss-Prot
Match: DCR_ARATH (BAHD acyltransferase DCR OS=Arabidopsis thaliana GN=DCR PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.325e-25
Identity = 56/152 (36.84%), Postives = 88/152 (57.89%), Query Frame = -3 
Query:  106 FRMAVNCRHRLEPRLSPYYFGNLIQSIPTVASVGELLSHDLGWGAERLHKNVVAHDNETVRRGVADWESNPRLFPLGNFDGASITMGSSPRFPMYDNDFGWGRPLAVRSGRANKFDGKISAFPGREGNGSVDLEVVLAPETMAGLENDLEFM 561
            F +  +CR R++P +   YFGNLIQ+I T  + G L +H   +GA  + K + AHD   +     +WE +P++F   +     + +GSSPRF +Y+ DFG+G+P  VRSG  N+F+G +  + G+ G  S+D+E+ L    M  L    EF+
Sbjct:  297 FTVFADCRRRVDPPMPEEYFGNLIQAIFTGTAAGLLAAHGPEFGASVIQKAIAAHDASVIDARNDEWEKSPKIFQFKDAGVNCVAVGSSPRFRVYEVDFGFGKPETVRSGSNNRFNGMMYLYQGKAGGISIDVEITLEASVMEKLVKSKEFL 448
[Close]
BLAST of DN617463 vs. ExPASy Swiss-Prot
Match: Y3028_ARATH (Uncharacterized acetyltransferase At3g50280 OS=Arabidopsis thaliana GN=At3g50280 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 7.000e-22
Identity = 57/154 (37.01%), Postives = 85/154 (55.19%), Query Frame = -3 
Query:  103 MAVNCRHRLEPRLSPYYFGNLIQSIPTVASVGELLSHDLGWGAERLHKNVVAHDNETVRRGVADWESNPRLFPLG---NFDGASITMGSSPRFPMYDNDFGWGRPLAVRSGRANKFDGKISAFPGREGNGSVDLEVVLAPETMAGLENDLEFME 555
            +AV+ R RL P L    FG++I +     +VGEL    LGW   +++  + +  NE  R    +W  N ++   G        S+ + SSPRF +YDNDFGWG+P+AVR+G +N   GK+  F G E  G +D+   L P+ +  L  D+EF+E
Sbjct:  288 VAVDLRQRLNPPLDKECFGHVIYNSVVTTTVGELHDQGLGWAFLQINNMLRSLTNEDYRIYAENWVRNMKIQKSGLGSKMTRDSVIVSSSPRFEVYDNDFGWGKPIAVRAGPSNSISGKLVFFRGIE-EGCIDVHAFLLPDVLVKLLADVEFLE 440
The following BLAST results are available for this feature:
BLAST of DN617463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
DCR_ARATH2.325e-2536.84BAHD acyltransferase DCR OS=Arabidopsis thaliana G... [more]
Y3028_ARATH7.000e-2237.01Uncharacterized acetyltransferase At3g50280 OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_01D21_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001D21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617463 ID=DN617463; Name=DN617463; organism=Citrus sinensis; type=EST; length=566bp
TTTTTTTTTTTTGAAAAATACCAAGCTTTTGATTAAAAATCGCTTAAAAT
TACACGCAAGCCTTGGTGGTAGGAATGACATTCAATCACATCACGACACG
TACTCCATGAACTCCAAGTCATTCTCAAGACCCGCCATAGTCTCGGGAGC
CAACACAACCTCAAGATCAACGCTCCCGTTTCCTTCCCTCCCAGGAAAGG
CTGAGATCTTCCCGTCAAACTTATTGGCCCTACCGCTCCTCACGGCCAAC
GGCCGGCCCCACCCAAAATCATTATCATACATTGGGAATCTCGGCGAGCT
GCCCATCGTGATTGATGCACCGTCAAAGTTCCCCAGCGGAAACAGCCTCG
GGTTACTTTCCCAGTCCGCTACACCGCGTCGCACCGTTTCATTATCGTGT
GCCACCACGTTCTTGTGAAGCCGCTCGGCTCCCCAGCCCAGATCGTGGGA
TAACAGTTCCCCCACTGAAGCAACGGTCGGGATGCTCTGTATCAAGTTGC
CAAAGTAGTACGGACTGAGCCGCGGCTCGAGCCTGTGGCGACAGTTCACA
GCCATGCGAAACGTCG
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