DN617453
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617453 vs. ExPASy Swiss-Prot
Match: RGA4_SOLBU (Putative disease resistance protein RGA4 OS=Solanum bulbocastanum GN=RGA4 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.979e-20 Identity = 70/169 (41.42%), Postives = 92/169 (54.44%), Query Frame = 2 Query: 2 LPSPLKQCFAYCALFPKDYLIVKEQLVLLWMAQGFLGLSIDNQCPEDVGHEYFMSLLSRSFFQDAEYDEWGNIIRCKIHDLMHDLAESVAGTECAKVKLDARNVNERTHHIS-----CVSGFDSSLEFPTALLRAKNLR-TFLSTVYSSSDRQLNESYCNKIVSSFKCL 490 LP L+QCFAYCA+FPKD ++KE L+ LWMA GFL LS N EDVG+E + L RSFFQ+ E GN KIHDL+HDLA S+ + + NV + H +S VS + SL LR NL + L + SS L+ Y + ++F+ L Sbjct: 400 LPLDLRQCFAYCAVFPKDTKMIKENLITLWMAHGFL-LSKGNLELEDVGNEVWNELYLRSFFQEIEAKS-GNTY-FKIHDLIHDLATSLFSASASCGNIREINVKDYKHTVSIGFAAVVSSYSPSLLKKFVSLRVLNLSYSKLEQLPSSIGDLLHLRYLDLSCNNFRSL 565
BLAST of DN617453 vs. ExPASy Swiss-Prot
Match: R13L1_ARATH (Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 3.891e-20 Identity = 62/172 (36.05%), Postives = 101/172 (58.72%), Query Frame = 2 Query: 2 LPSPLKQCFAYCALFPKDYLIVKEQLVLLWMAQGFLGLSIDNQCPEDVGHEYFMSLLSRSFFQDAEYDEWGNIIRCKIHDLMHDLAESVAGTECAKVKLDAR-NVNERTHHISCV-SGFDSSLEFPTALLRAKNLRTFLSTVYSSSDRQ--LNESYCNKIVSSFKCLRTLNL 505 LP+ LK+CFAYC++FPK + K+++VLLWMA+GFL + ++ E++G+EYF L SRS Q + R +HD +++LA+ +G +K + + V+ERT ++S + + +EF AL K LRTFL ++S R L++ K++ + LR L+L Sbjct: 422 LPAHLKRCFAYCSIFPKGHAFEKDKVVLLWMAEGFLQQTRSSKNLEELGNEYFSELESRSLLQKTK-------TRYIMHDFINELAQFASGEFSSKFEDGCKLQVSERTRYLSYLRDNYAEPMEF-EALREVKFLRTFLPLSLTNSSRSCCLDQMVSEKLLPTLTRLRVLSL 585
BLAST of DN617453 vs. ExPASy Swiss-Prot
Match: RGA2_SOLBU (Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 5.618e-19 Identity = 71/171 (41.52%), Postives = 90/171 (52.63%), Query Frame = 2 Query: 2 LPSPLKQCFAYCALFPKDYLIVKEQLVLLWMAQGFLGLSIDNQCPEDVGHEYFMSLLSRSFFQDAEYDEWGNIIRCKIHDLMHDLAESVAGTECAKVKLDARNVNERTHHISCVSGFDSSLEFPTALLRAKNLRTFLSTVYSSSDRQLNESYCNKIVSS---FKCLRTLNL 505 LP LKQCFAYCA+FPKD + KE+L+ LWMA GFL LS N EDVG E + L RSFFQ+ E + K+HDL+HDLA S+ + + N + TH +S GF + F T L F+S + L +S NK+ SS LR LNL Sbjct: 399 LPLDLKQCFAYCAVFPKDAKMEKEKLISLWMAHGFL-LSKGNMELEDVGDEVWKELYLRSFFQEIEVKDGKTYF--KMHDLIHDLATSLFSANTSSSNIREINKHSYTHMMSI--GFAEVVFFYT----LPPLEKFISLRVLN----LGDSTFNKLPSSIGDLVHLRYLNL 556
BLAST of DN617453 vs. ExPASy Swiss-Prot
Match: RGA1_SOLBU (Putative disease resistance protein RGA1 OS=Solanum bulbocastanum GN=RGA1 PE=2 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 3.642e-18 Identity = 58/139 (41.73%), Postives = 74/139 (53.24%), Query Frame = 2 Query: 2 LPSPLKQCFAYCALFPKDYLIVKEQLVLLWMAQGFLGLSIDNQCPEDVGHEYFMSLLSRSFFQDAEYDEWGNIIRCKIHDLMHDLAESVAGTECAKVKLDARNVNERTHHIS-----CVSGFDSSLEFPTALLRAKNLR 403 LP L+QCF YCA+FPKD + KE L+ WMA GFL LS N EDVG+E + L RSFFQ+ E + K+HDL+HDLA S+ + + N N + +S VS + SL LR NLR Sbjct: 398 LPLDLRQCFVYCAVFPKDTKMAKENLIAFWMAHGFL-LSKGNLELEDVGNEVWNELYLRSFFQEIEVESGKTYF--KMHDLIHDLATSLFSANTSSSNIREINANYDGYMMSIGFAEVVSSYSPSLLQKFVSLRVLNLR 533
BLAST of DN617453 vs. ExPASy Swiss-Prot
Match: DRL21_ARATH (Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana GN=At3g14460 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.756e-18 Identity = 61/172 (35.47%), Postives = 99/172 (57.56%), Query Frame = 2 Query: 2 LPSPLKQCFAYCALFPKDYLIVKEQLVLLWMAQGFLGLSIDNQCPEDVGHEYFMSLLSRSFFQDAEYDEWGNIIRCKIHDLMHDLAESVAGTECAKVKLD-ARNVNERTHHIS-CVSGFDSSLEFPTALLRAKNLRTFL--STVYSSSDRQLNESYCNKIVSSFKCLRTLNL 505 LP LK+CFA C++FPK ++ +E+LVLLWMA L ++ ED+G++Y L+++SFFQ + + +HDLM+DLA++V+G C +++ D + T H S S D+S+ F ++ A+ LRT L ++ S QL E N ++++ LR L+L Sbjct: 414 LPPQLKRCFALCSIFPKGHVFDREELVLLWMAIDLLYQPRSSRRLEDIGNDYLGDLVAQSFFQRLDI----TMTSFVMHDLMNDLAKAVSGDFCFRLEDDNIPEIPSTTRHFSFSRSQCDASVAF-RSICGAEFLRTILPFNSPTSLESLQLTEKVLNPLLNALSGLRILSL 580
BLAST of DN617453 vs. ExPASy Swiss-Prot
Match: RGA3_SOLBU (Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 1.384e-17 Identity = 63/168 (37.50%), Postives = 82/168 (48.81%), Query Frame = 2 Query: 2 LPSPLKQCFAYCALFPKDYLIVKEQLVLLWMAQGFLGLSIDNQCPEDVGHEYFMSLLSRSFFQDAEYDEWGNIIRCKIHDLMHDLAESVAGTECAKVKLDARNVNERTHHISCVSGFDSSLEFPTALLRAKNLRTFLSTVYSSSDRQLNESYCNKIVSSFKCLRTLNL 505 LP L+QCFAYCA+FPKD I KE L+ LWMA FL LS N EDVG+E + L RSFFQ+ E K+HDL+HDLA S+ + + NV + D + F N + +S +S ++ SY + F LR LNL Sbjct: 398 LPLDLRQCFAYCAVFPKDTKIEKEYLIALWMAHSFL-LSKGNMELEDVGNEVWNELYLRSFFQEIEVKSGKTYF--KMHDLIHDLATSMFSASASSRSIRQINVKD-----------DEDMMFIVT-----NYKDMMSIGFS----EVVSSYSPSLFKRFVSLRVLNL 542 The following BLAST results are available for this feature:
BLAST of DN617453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617453 ID=DN617453; Name=DN617453; organism=Citrus sinensis; type=EST; length=507bpback to top |