DN617414

Overview
NameDN617414
Unique NameDN617414
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length604
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2703 contig Csv1_Contig2703:595..1198. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLG3_ARATH (Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2)

HSP 1 Score: 226.868 bits (577), Expect = 6.300e-59
Identity = 110/199 (55.28%), Postives = 138/199 (69.35%), Query Frame = 1
Query:    1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGL-TGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDD-EQSKIYSQEMLDFGVPSPMFVTLAVAAIVKL 591
            FC P R AF GD+P +L+D+++Q KRWAIGLLEVA SRY PIT+G+++MGL TG+ Y  Y+ W  WS+P+++Y FLPQLAL    S+FPK S+P              QD LDF+LEGGT+  WWNDQR+W IRG S HLFG +E+ LK L +S  GFNVTSK  DD EQSK Y +E+ +FG  S MF+ L   AIV L
Sbjct:  482 FCRPKRAAFCGDSPKSLIDVVSQQKRWAIGLLEVAISRYSPITYGVKSMGLVTGVGYCQYACWAFWSLPLIVYGFLPQLALLYQSSVFPKSSDPWFWLYIVLFLGAYGQDLLDFVLEGGTYGGWWNDQRMWSIRGFSSHLFGFIEFTLKTLNLSTHGFNVTSKANDDEEQSKRYEKEIFEFGPSSSMFLPLTTVAIVNL 680          
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLG2_ARATH (Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 4.083e-58
Identity = 105/199 (52.76%), Postives = 135/199 (67.84%), Query Frame = 1
Query:    1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLT-GLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDD-EQSKIYSQEMLDFGVPSPMFVTLAVAAIVKL 591
            FC+P + AFYGD+P  L D++ Q  RW++GLLEVAFSRY P+T+GI+ + L   L Y HY+FWP W IP+++Y  LPQ+AL  G+S+FPK S+P              QD  DFLLEGGT+RKWWNDQR+W++RGLS   FG  E+ LK L +S  G+NVTSK  DD EQ K Y QE+ DFG  S MF+ +   AI+ L
Sbjct:  453 FCSPTKAAFYGDSPKCLTDVIGQQIRWSVGLLEVAFSRYNPLTYGIKPLSLLMSLGYCHYAFWPFWCIPLVVYGILPQVALIHGVSVFPKASDPWFWLYIILFLGGYAQDLSDFLLEGGTYRKWWNDQRMWMVRGLSSFFFGFTEFTLKTLNLSTQGYNVTSKSNDDNEQMKRYEQEIFDFGPSSSMFLPITTVAIMNL 651          
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLG1_ARATH (Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 2.241e-56
Identity = 108/199 (54.27%), Postives = 135/199 (67.84%), Query Frame = 1
Query:    1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLT-GLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKV-VDDEQSKIYSQEMLDFGVPSPMFVTLAVAAIVKL 591
            FCNP + AFYGD+P  LVDL+ Q  RWA+GL E++FS+Y PIT+GI+++ L  GL Y +  F P WSIP+ +Y  LPQLAL SG+S+FPK S+P              QD  DFLLEGGT+RKWWNDQR+ +I+GLS   FG +E++LK L +S   FNVTSK   DDEQ K Y QE+ DFG  S MF+ L   AIV L
Sbjct:  463 FCNPKKAAFYGDSPKCLVDLVGQQIRWAVGLFEMSFSKYSPITYGIKSLDLLMGLGYCNSPFKPFWSIPLTVYGLLPQLALISGVSVFPKASDPWFWLYIILFFGAYAQDLSDFLLEGGTYRKWWNDQRMLMIKGLSSFFFGFIEFILKTLNLSTPKFNVTSKANDDDEQRKRYEQEIFDFGTSSSMFLPLTTVAIVNL 661          
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLE1_ARATH (Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 8.852e-37
Identity = 75/199 (37.69%), Postives = 114/199 (57.29%), Query Frame = 1
Query:    1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGL-TGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQSKIYSQEMLDFGVPSPMFVTLAVAAIVKLF 594
            + NP++ AF G APT L  +L Q +RW+ G  ++  S+Y P+ +G   + L   L Y  Y  W   S+P+++Y+ L  L L  GI +FPK+S                    +FL  GGTFR WWN+QR+WL R  S  LFG ++ + K LG+S   F +T+KV ++E ++ Y +E+++FGV SPMF+ L    ++ LF
Sbjct:  459 YLNPEKQAFLGVAPTNLHQMLVQQRRWSEGDFQIMLSKYSPVWYGKGKISLGLILGYCCYCLWAPSSLPVLIYSVLTSLCLFKGIPLFPKVSSSWFIPFGYVTVAATAYSLAEFLWCGGTFRGWWNEQRMWLYRRTSSFLFGFMDTIKKLLGVSESAFVITAKVAEEEAAERYKEEVMEFGVESPMFLVLGTLGMLNLF 657          
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLE1_ORYSJ (Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 5.937e-33
Identity = 69/196 (35.20%), Postives = 106/196 (54.08%), Query Frame = 1
Query:    1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLT-GLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQSKIYSQEMLDFGVPSPMFVTLAVAAIV 585
            F NP R AF G AP+TL   + QHKRW+ G L +  S+YC   FG   + L   + Y     W   S+P + Y  +P L L  G  +FP+I  P                  + LL G T + WWN QR+W+++ ++ +L+G ++ + K +G+S   F VT+KV   +++K Y QE+L+FG  SP +V +A  A++
Sbjct:  467 FINPKRAAFLGLAPSTLAQNILQHKRWSEGNLTIFLSKYCSFLFGHGKIKLQLQMGYCICGLWAANSLPTLYYVVIPSLGLVKGTPLFPQIMSPWATPFIYVFCVKTLYGLYEALLSGDTLKGWWNGQRMWMVKSITSYLYGFIDTIRKCVGMSKMSFEVTAKVSGHDEAKRYEQEILEFGSSSPEYVIIATVALL 662          
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLE6_ORYSJ (Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.323e-32
Identity = 67/196 (34.18%), Postives = 104/196 (53.06%), Query Frame = 1
Query:    1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLT-GLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQSKIYSQEMLDFGVPSPMFVTLAVAAIV 585
            +  P R AF G AP TL   + QHKRW+ G   +  S++    FG   + L   + Y  Y  W   S+P + Y  +P L L  G  +FP+I  P                  + LL G T + WWN QR+W+++ ++ +L+G ++ + K LG+S   F +T+KV D +++K Y QE+L+FG  SP FV +A  A++
Sbjct:  462 YMEPQRAAFVGVAPATLAQTILQHKRWSEGNFTIFLSKHNTFLFGHGKISLQLQMGYCIYGLWAANSLPTIYYVMIPALGLVKGTPLFPEIMSPWATPFIYVFCVKTLYSLYEALLSGDTLKGWWNGQRMWMVKRITSYLYGFIDTIRKLLGLSKMSFEITAKVSDGDEAKRYEQEILEFGSSSPEFVIIATVALL 657          
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLE2_ORYSJ (Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.335e-29
Identity = 69/198 (34.85%), Postives = 104/198 (52.53%), Query Frame = 1
Query:    1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGL-TGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQSKIYSQEMLDFGVPSPMFVTLAVAAIVKL 591
            + NP R  F G  PT+L  +L  +KRW  G L+++ SRY P   G   + L   + Y+   FW + S P + Y  +P L   +GIS+FP+ + P                  + L  G +  +WWN QR+WLIR ++ +L  T++   + LGIS  GFN+T KV D +  + Y + M++FG  S MFV L   A++ L
Sbjct:  474 YYNPKRKGFLGMTPTSLGQILVLYKRWTEGFLQISLSRYSPFLLGHGKIKLGLQMGYSVCGFWAVNSFPTLYYVTIPSLCFLNGISLFPEKTSPWFIPFAYVMVAAYSCSLAESLQCGDSAVEWWNAQRMWLIRRITSYLLATIDTFRRILGISESGFNLTVKVTDLQALERYKKGMMEFGSFSAMFVILTTVALLNL 671          
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.403e-28
Identity = 69/199 (34.67%), Postives = 102/199 (51.26%), Query Frame = 1
Query:    1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGI--RTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQ--SKIYSQEMLDFGVPSPMFVTLAVAAIV 585
            +C P RPAF G AP  L D LNQ  RWA+G +E+ FSR+CPI +G   R   L   AY + + +P+ SIP++LY  LP + L +G  I P+IS                   L+    G    +WW +++ W+I G+S HLF   + LLK L      F VTSK  D+E   +++Y  +     +P    + + +  +V
Sbjct:  789 YCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLLYCILPAICLLTGKFIIPEISNFASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQGLLKVLAGIDTSFTVTSKASDEEGDFAELYMFKWTTLLIPPTTILIINLVGVV 987          
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSI (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.403e-28
Identity = 69/199 (34.67%), Postives = 102/199 (51.26%), Query Frame = 1
Query:    1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGI--RTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQ--SKIYSQEMLDFGVPSPMFVTLAVAAIV 585
            +C P RPAF G AP  L D LNQ  RWA+G +E+ FSR+CPI +G   R   L   AY + + +P+ SIP++LY  LP + L +G  I P+IS                   L+    G    +WW +++ W+I G+S HLF   + LLK L      F VTSK  D+E   +++Y  +     +P    + + +  +V
Sbjct:  789 YCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLLYCILPAICLLTGKFIIPEISNFASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQGLLKVLAGIDTSFTVTSKASDEEGDFAELYMFKWTTLLIPPTTILIINLVGVV 987          
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.185e-27
Identity = 67/199 (33.67%), Postives = 102/199 (51.26%), Query Frame = 1
Query:    1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGI--RTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQ--SKIYSQEMLDFGVPSPMFVTLAVAAIV 585
            +C P RPAF G AP  L D LNQ  RWA+G +E+ FSR+CPI +G   R   L   AY + + +P+ SIP+++Y  LP + L +G  I P+IS                   L+    G    +WW +++ W+I G+S HLF   + LLK L      F VTSK  D++   +++Y  +     +P    + + +  +V
Sbjct:  797 YCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLIYCVLPAICLLTGKFIIPEISNFASIWFISLFISIFATGILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYMFKWTTLLIPPTTILIINLVGVV 995          
The following BLAST results are available for this feature:
BLAST of DN617414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CSLG3_ARATH6.300e-5955.28Cellulose synthase-like protein G3 OS=Arabidopsis ... [more]
CSLG2_ARATH4.083e-5852.76Cellulose synthase-like protein G2 OS=Arabidopsis ... [more]
CSLG1_ARATH2.241e-5654.27Cellulose synthase-like protein G1 OS=Arabidopsis ... [more]
CSLE1_ARATH8.852e-3737.69Cellulose synthase-like protein E1 OS=Arabidopsis ... [more]
CSLE1_ORYSJ5.937e-3335.20Cellulose synthase-like protein E1 OS=Oryza sativa... [more]
CSLE6_ORYSJ1.323e-3234.18Cellulose synthase-like protein E6 OS=Oryza sativa... [more]
CSLE2_ORYSJ2.335e-2934.85Cellulose synthase-like protein E2 OS=Oryza sativa... [more]
CESA2_ORYSJ4.403e-2834.67Probable cellulose synthase A catalytic subunit 2 ... [more]
CESA2_ORYSI4.403e-2834.67Probable cellulose synthase A catalytic subunit 2 ... [more]
CESA8_ORYSJ2.185e-2733.67Probable cellulose synthase A catalytic subunit 8 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01C20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001C20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617414 ID=DN617414; Name=DN617414; organism=Citrus sinensis; type=EST; length=604bp
TTTTGCAATCCTGATAGGCCAGCATTTTATGGTGACGCCCCAACAACTCT
CGTTGATTTGCTAAATCAACACAAGCGATGGGCCATTGGCCTCCTTGAGG
TGGCCTTTTCCAGATACTGTCCCATAACCTTCGGGATCCGAACCATGGGC
TTAACGGGCCTAGCTTATGCTCATTATTCATTCTGGCCTATTTGGTCTAT
TCCAATAATGCTATATGCATTCCTCCCCCAGCTAGCTCTCGCCAGTGGAA
TCAGCATCTTCCCAAAGATTTCGGAACCAGGGTTTCTCCTGTACTTATTT
CTTTTCCTTGGAGCTTATGGACAAGATTGTCTAGATTTCCTATTGGAAGG
AGGTACATTTCGAAAATGGTGGAATGATCAGAGAATATGGCTAATAAGGG
GGCTTTCTTGTCACCTTTTTGGAACACTTGAGTACTTACTCAAGTTCTTG
GGAATTTCTGCATTTGGATTCAATGTGACCAGCAAAGTCGTTGATGATGA
ACAAAGCAAAATATATAGCCAAGAGATGCTTGATTTTGGAGTGCCATCGC
CTATGTTTGTGACACTGGCAGTGGCAGCAATAGTTAAACTTTTTCTCATT
TTCT
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