DN617413
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617413 vs. ExPASy Swiss-Prot
Match: CSLG3_ARATH (Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2) HSP 1 Score: 162.155 bits (409), Expect = 2.045e-39 Identity = 81/149 (54.36%), Postives = 102/149 (68.46%), Query Frame = -3 Query: 184 GQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDD-EQSKIYSQEMLDFGVPSPMFVTLAVAAIVNFFSFSFGFLQMICGSDDNEGLPLQMLLAGFIMLNCWPVYEAMVLRTDKGKMPTKVTIV 627 GQD LDF+LEGGT+ WWNDQR+W IRG S HLFG +E+ LK L +S GFNVTSK DD EQSK Y +E+ +FG S MF+ L AIVN +F +G + EGL L+++LA F ++NC P+YEAMVLR D GK+P +V V Sbjct: 589 GQDLLDFVLEGGTYGGWWNDQRMWSIRGFSSHLFGFIEFTLKTLNLSTHGFNVTSKANDDEEQSKRYEKEIFEFGPSSSMFLPLTTVAIVNLLAFVWGLYGLFAW---GEGLVLELMLASFAVVNCLPIYEAMVLRIDDGKLPKRVCFV 734
BLAST of DN617413 vs. ExPASy Swiss-Prot
Match: CSLG2_ARATH (Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 4.715e-36 Identity = 75/145 (51.72%), Postives = 97/145 (66.90%), Query Frame = -3 Query: 193 QDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDD-EQSKIYSQEMLDFGVPSPMFVTLAVAAIVNFFSFSFGFLQMICGSDDNEGLPLQMLLAGFIMLNCWPVYEAMVLRTDKGKMPTKV 624 QD DFLLEGGT+RKWWNDQR+W++RGLS FG E+ LK L +S G+NVTSK DD EQ K Y QE+ DFG S MF+ + AI+N +F G + EG L+++LA F ++NC P+YEAMVLR D GK+P ++ Sbjct: 561 QDLSDFLLEGGTYRKWWNDQRMWMVRGLSSFFFGFTEFTLKTLNLSTQGYNVTSKSNDDNEQMKRYEQEIFDFGPSSSMFLPITTVAIMNLLAFMRGLYGIFTW---GEGPVLELMLASFAVVNCLPIYEAMVLRIDDGKLPKRI 702
BLAST of DN617413 vs. ExPASy Swiss-Prot
Match: CSLG1_ARATH (Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.284e-33 Identity = 74/142 (52.11%), Postives = 96/142 (67.61%), Query Frame = -3 Query: 205 QDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKV-VDDEQSKIYSQEMLDFGVPSPMFVTLAVAAIVNFFSFSFGFLQMI-CGSDDNEGLPLQMLLAGFIMLNCWPVYEAMVLRTDKGKM 624 QD DFLLEGGT+RKWWNDQR+ +I+GLS FG +E++LK L +S FNVTSK DDEQ K Y QE+ DFG S MF+ L AIVN +F +G ++ CG + L L+++L F ++NC P+Y AMVLR D GK+ Sbjct: 571 QDLSDFLLEGGTYRKWWNDQRMLMIKGLSSFFFGFIEFILKTLNLSTPKFNVTSKANDDDEQRKRYEQEIFDFGTSSSMFLPLTTVAIVNLLAFVWGLYGILFCGGE----LYLELMLVSFAVVNCLPIYGAMVLRKDDGKL 708
BLAST of DN617413 vs. ExPASy Swiss-Prot
Match: CSLE1_ARATH (Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 3.866e-30 Identity = 59/143 (41.26%), Postives = 95/143 (66.43%), Query Frame = -3 Query: 187 DFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQSKIYSQEMLDFGVPSPMFVTLAVAAIVNFFSFSFGFLQMICG-SDDNEGLPLQMLLAGFIMLNCWPVYEAMVLRTDKGKMPTKVTI 612 +FL GGTFR WWN+QR+WL R S LFG ++ + K LG+S F +T+KV ++E ++ Y +E+++FGV SPMF+ L ++N F F+ +++ G D + + +Q ++ G +++ WP+Y+ M+LR DKGKMP VT+ Sbjct: 571 EFLWCGGTFRGWWNEQRMWLYRRTSSFLFGFMDTIKKLLGVSESAFVITAKVAEEEAAERYKEEVMEFGVESPMFLVLGTLGMLNLFCFAAAVARLVSGDGGDLKTMGMQFVITGVLVVINWPLYKGMLLRQDKGKMPMSVTV 713
BLAST of DN617413 vs. ExPASy Swiss-Prot
Match: CSLE6_ORYSJ (Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.520e-26 Identity = 57/140 (40.71%), Postives = 92/140 (65.71%), Query Frame = -3 Query: 187 LLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQSKIYSQEMLDFGVPSPMFVTLAVAAIVNFFSFSFGFLQMICGSDDNEGLPLQMLLAGFIMLNCWPVYEAMVLRTDKGKMPTKVTI 606 LL G T + WWN QR+W+++ ++ +L+G ++ + K LG+S F +T+KV D +++K Y QE+L+FG SP FV +A A++NF G +++ G N LP Q++L G I++ P+YEAM +R DKG++P VT+ Sbjct: 576 LLSGDTLKGWWNGQRMWMVKRITSYLYGFIDTIRKLLGLSKMSFEITAKVSDGDEAKRYEQEILEFGSSSPEFVIIATVALLNFVCLVAGLSKIMAGV-WNVFLP-QVILCGLIVITNIPIYEAMFVRKDKGRIPLPVTL 713
BLAST of DN617413 vs. ExPASy Swiss-Prot
Match: CSLE1_ORYSJ (Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 2.195e-25 Identity = 57/143 (39.86%), Postives = 91/143 (63.64%), Query Frame = -3 Query: 187 LLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQSKIYSQEMLDFGVPSPMFVTLAVAAIVNFFSFSFGFLQMICGSDD---NEGLPLQMLLAGFIMLNCWPVYEAMVLRTDKGKMPTKVTI 606 LL G T + WWN QR+W+++ ++ +L+G ++ + K +G+S F VT+KV +++K Y QE+L+FG SP +V +A A++NF G Q++ G + N LP Q +L G I++ P+YEAM LR D G++PT VT+ Sbjct: 581 LLSGDTLKGWWNGQRMWMVKSITSYLYGFIDTIRKCVGMSKMSFEVTAKVSGHDEAKRYEQEILEFGSSSPEYVIIATVALLNFVCLVGGLSQIMAGVWNMPWNVFLP-QAILCGMIVIINMPIYEAMFLRKDNGRIPTAVTL 722
BLAST of DN617413 vs. ExPASy Swiss-Prot
Match: CSLE2_ORYSJ (Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.080e-20 Identity = 55/140 (39.29%), Postives = 79/140 (56.43%), Query Frame = -3 Query: 184 GGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQSKIYSQEMLDFGVPSPMFVTLAVAAIVNFFSFSFGFLQMIC--GSDDNEGLPLQMLLAGFIMLNCWPVYEAMVLRTDKGKMPTKVTIV 597 G + +WWN QR+WLIR ++ +L T++ + LGIS GFN+T KV D + + Y + M++FG S MFV L A++N G +++ G E L LQ +L I+ PVYEA+ LR DKG +P V V Sbjct: 591 GDSAVEWWNAQRMWLIRRITSYLLATIDTFRRILGISESGFNLTVKVTDLQALERYKKGMMEFGSFSAMFVILTTVALLNLACMVLGISRVLLQEGPGGLETLFLQAVLCVLIVAINSPVYEALFLRRDKGSLPASVARV 730 The following BLAST results are available for this feature:
BLAST of DN617413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617413 ID=DN617413; Name=DN617413; organism=Citrus sinensis; type=EST; length=629bpback to top |