DN617409

Overview
NameDN617409
Unique NameDN617409
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8101 contig Csv1_Contig8101:17..683. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617409 vs. ExPASy Swiss-Prot
Match: IN21B_ORYSJ (Protein IN2-1 homolog B OS=Oryza sativa subsp. japonica GN=GSTZ5 PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 6.375e-74
Identity = 132/202 (65.35%), Postives = 159/202 (78.71%), Query Frame = 1
Query:   64 ATTAQENLPPPLDSKAELPPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPANKVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKIADELFSHIDTFTNDVYTSF--KGDPAKQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKL 663
            A++ +E LPP L S +E PPLFDGT RLY++Y CP+AQRAWI RNYKGLQDKIK+V ++L DRPAWYKEKVYP NKVP+LEHN +V GESLDL+KY+D+NFEGP+LLPDD EK++ A+EL ++ D F    Y+S   KGD   +A  A D +E AL KF+DGPFFLGQFS VDIAY+PF+ERFQIF S    YDIT GRP L
Sbjct:    9 ASSEKEVLPPSLTSSSEPPPLFDGTTRLYVAYHCPYAQRAWIARNYKGLQDKIKIVAIDLADRPAWYKEKVYPENKVPSLEHNNQVKGESLDLVKYIDTNFEGPALLPDDSEKQQFAEELLAYTDAFNKASYSSIVAKGDVCDEAVAALDKIEAALSKFNDGPFFLGQFSLVDIAYVPFIERFQIFFSGIKNYDITKGRPNL 210          
BLAST of DN617409 vs. ExPASy Swiss-Prot
Match: IN21B_ORYSI (Protein IN2-1 homolog B OS=Oryza sativa subsp. indica GN=GSTZ5 PE=1 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 6.375e-74
Identity = 132/202 (65.35%), Postives = 159/202 (78.71%), Query Frame = 1
Query:   64 ATTAQENLPPPLDSKAELPPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPANKVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKIADELFSHIDTFTNDVYTSF--KGDPAKQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKL 663
            A++ +E LPP L S +E PPLFDGT RLY++Y CP+AQRAWI RNYKGLQDKIK+V ++L DRPAWYKEKVYP NKVP+LEHN +V GESLDL+KY+D+NFEGP+LLPDD EK++ A+EL ++ D F    Y+S   KGD   +A  A D +E AL KF+DGPFFLGQFS VDIAY+PF+ERFQIF S    YDIT GRP L
Sbjct:    9 ASSEKEVLPPSLTSSSEPPPLFDGTTRLYVAYHCPYAQRAWIARNYKGLQDKIKIVAIDLADRPAWYKEKVYPENKVPSLEHNNQVKGESLDLVKYIDTNFEGPALLPDDSEKQQFAEELLAYTDAFNKASYSSIVAKGDVCDEAVAALDKIEAALSKFNDGPFFLGQFSLVDIAYVPFIERFQIFFSGIKNYDITKGRPNL 210          
BLAST of DN617409 vs. ExPASy Swiss-Prot
Match: IN21A_ORYSJ (Protein IN2-1 homolog A OS=Oryza sativa subsp. japonica GN=Os03g0283200 PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 1.986e-67
Identity = 124/201 (61.69%), Postives = 153/201 (76.12%), Query Frame = 1
Query:   67 TTAQENLPPPLDSKAELPPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPANKVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKIADELFSHIDTFTNDVYTSF--KGDPAKQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKL 663
            ++ +E LP  L S +E P LFDGT RLYI Y CPFAQRAWI RN+KGLQDKI+LV ++LQD+PAWYKEKVY    VP+LEHNGK++GESLDLIKY+DS+FEGP+LLP+DPEKR+ ADEL ++ + FT  +Y+    K D + +   A D +E AL KF DGPFFLGQFS VDIAY+  +ER QI+ S   KY+IT GRP L
Sbjct:    9 SSGKEALPAALGSASEPPRLFDGTTRLYICYFCPFAQRAWIIRNFKGLQDKIELVGIDLQDKPAWYKEKVYEQGTVPSLEHNGKIMGESLDLIKYIDSHFEGPALLPEDPEKRQFADELIAYANAFTKALYSPLISKADLSAETVAALDKIEAALSKFGDGPFFLGQFSLVDIAYVTIIERIQIYYSHIRKYEITNGRPNL 209          
BLAST of DN617409 vs. ExPASy Swiss-Prot
Match: IN21_MAIZE (Protein IN2-1 OS=Zea mays GN=IN2-1 PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 5.063e-63
Identity = 115/202 (56.93%), Postives = 148/202 (73.27%), Query Frame = 1
Query:   64 ATTAQENLPPPLDSKAELPPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPANKVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKIADELFSHIDTFTNDVYTSFKGDPA--KQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKL 663
            +++ +E+LPP L S ++ PP+FDGT RLYI Y CPFAQRAW+TRN KGLQDK++LV ++LQD+PAWYK+KVY    VP+LEH+ +V GESLDLI+Y+DSNF+GP+LLP+D  KR+ ADELF+  + FT  +Y+      A   +   A D LE  L KFDDGPFFLGQFS  D+AY+  +ER QI+ S    YDI  GRP L
Sbjct:    8 SSSVKESLPPALGSTSQPPPVFDGTTRLYICYFCPFAQRAWVTRNLKGLQDKMELVAIDLQDKPAWYKDKVYAQGTVPSLEHDSEVRGESLDLIRYIDSNFDGPALLPEDAAKRQFADELFASANAFTKALYSPLLSHAAVSDEVVAALDKLEADLSKFDDGPFFLGQFSLADVAYVTILERVQIYYSHLRNYDIAQGRPNL 209          
BLAST of DN617409 vs. ExPASy Swiss-Prot
Match: GSTO1_PIG (Glutathione S-transferase omega-1 OS=Sus scrofa GN=GSTO1 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 4.068e-12
Identity = 52/171 (30.41%), Postives = 86/171 (50.29%), Query Frame = 1
Query:  121 PLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPANKVPALEHN-GKVIGESLDLIKYVDSNFEGPSLLPDDPEKR---KIADELFSHID----TFTNDVYTSFKGDPAKQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQ 609
            P+ +G  R+Y    CPFAQR  +  N KG++ ++  + +NL+++P W+ +K  P+  VP LE++ G++I ES    +Y+D  + G  LLPDDP ++   K+  EL S +      F      +      ++    F  LE+ L K     F     S +D    P+ ER +
Sbjct:   18 PVPEGLIRVYSMRFCPFAQRTLLVLNAKGIRHQV--ININLKNKPEWFFQK-NPSGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMVFELSSKVPPLLIRFIRRENEADCSGLKEELRKEFSKLEEVLTKKKTTYFGGSSLSMIDYLIWPWFERLE 185          
BLAST of DN617409 vs. ExPASy Swiss-Prot
Match: GSTO1_HUMAN (Glutathione S-transferase omega-1 OS=Homo sapiens GN=GSTO1 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 5.313e-12
Identity = 52/171 (30.41%), Postives = 89/171 (52.05%), Query Frame = 1
Query:  121 PLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPANKVPALEHN-GKVIGESLDLIKYVDSNFEGPSLLPDDPEKR---KIADELFSHIDTFTND-VYTSFKGDPA---KQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQ 609
            P+ +G+ R+Y    CPFA+R  +    KG++ ++  + +NL+++P W+ +K  P   VP LE++ G++I ES    +Y+D  + G  LLPDDP ++   K+  ELFS + +     + +  K D A   ++    F  LE+ L       F     S +D    P+ ER +
Sbjct:   18 PVPEGSIRIYSMRFCPFAERTRLVLKAKGIRHEV--ININLKNKPEWFFKK-NPFGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELFSKVPSLVGSFIRSQNKEDYAGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYLIWPWFERLE 185          
BLAST of DN617409 vs. ExPASy Swiss-Prot
Match: GSTO1_RAT (Glutathione S-transferase omega-1 OS=Rattus norvegicus GN=Gsto1 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 6.939e-12
Identity = 55/175 (31.43%), Postives = 89/175 (50.86%), Query Frame = 1
Query:  121 PLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPANKVPALEH-NGKVIGESLDLIKYVDSNFEGPSLLPDDPEKR---KIADELFSHIDTFTNDVYTSFKGDPAKQAGPAF-DYLEKALDKFDDG------PFFLG-QFSQVDIAYIPFVERFQ 609
            P+ +G  R+Y    CPFAQR  +    KG++ +I  + +NL+++P W+ EK  P   VP LE+  G +I ES+   +Y+D  +    L PDDP ++   K+  ELFS + +    + TSF     K+  P   + L+K   K ++        FF G   S +D    P+ +R +
Sbjct:   18 PVPEGQIRVYSMRFCPFAQRTLMVLKAKGIRHEI--ININLKNKPEWFFEK-NPFGLVPVLENTQGHLITESVITCEYLDEAYPEKKLFPDDPYEKACQKMTFELFSKVPS----LVTSFIRAKRKEDHPGIKEELKKEFSKLEEAMANKRTAFFGGNSLSMIDYLIWPWFQRLE 185          
BLAST of DN617409 vs. ExPASy Swiss-Prot
Match: GSTO1_CAEEL (Glutathione transferase omega-1 OS=Caenorhabditis elegans GN=gsto-1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.063e-12
Identity = 42/106 (39.62%), Postives = 63/106 (59.43%), Query Frame = 1
Query:  118 PPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPANKVPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDP----EKRKIADEL 423
            PPL  G+ R+Y    CP+A+RA +    KG++ ++  V LN+ D+  WY  K Y   K PA+EHNGKV+ ES  + +Y+D  F    +LP DP    +++ +AD L
Sbjct:   18 PPLSKGSFRVYNMRFCPWAERAMLYVAAKGIEAEV--VNLNVTDKLEWYWTKHYQG-KAPAVEHNGKVVIESGFIPEYLDDAFPETRILPTDPYEKVQQKLLADRL 120          
BLAST of DN617409 vs. ExPASy Swiss-Prot
Match: GSTO1_MOUSE (Glutathione S-transferase omega-1 OS=Mus musculus GN=Gsto1 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.444e-11
Identity = 54/174 (31.03%), Postives = 87/174 (50.00%), Query Frame = 1
Query:  121 PLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPANKVPALEHN-GKVIGESLDLIKYVDSNFEGPSLLPDDPEKR---KIADELFSHIDTFTNDVYTSFKGDPAKQAGPAF-DYLEKALDKFDDG----PFFLG--QFSQVDIAYIPFVERFQ 609
            P+ +G  R+Y    CPFAQR  +    KG++ ++  + +NL+++P W+ EK  P   VP LE++ G ++ ES+   +Y+D  +    L PDDP K+   K+  E FS +      +  SF     K+  P   + LE    K ++G      FLG    S VD    P+ +R +
Sbjct:   18 PVPEGQIRVYSMRFCPFAQRTLMVLKAKGIRHEV--ININLKNKPEWFFEK-NPLGLVPVLENSQGHLVTESVITCEYLDEAYPEKKLFPDDPYKKARQKMTLESFSKVP----PLIASFVRSKRKEDSPNLREALENEFKKLEEGMDNYKSFLGGDSPSMVDYLTWPWFQRLE 184          
The following BLAST results are available for this feature:
BLAST of DN617409 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
IN21B_ORYSJ6.375e-7465.35Protein IN2-1 homolog B OS=Oryza sativa subsp. jap... [more]
IN21B_ORYSI6.375e-7465.35Protein IN2-1 homolog B OS=Oryza sativa subsp. ind... [more]
IN21A_ORYSJ1.986e-6761.69Protein IN2-1 homolog A OS=Oryza sativa subsp. jap... [more]
IN21_MAIZE5.063e-6356.93Protein IN2-1 OS=Zea mays GN=IN2-1 PE=2 SV=1[more]
GSTO1_PIG4.068e-1230.41Glutathione S-transferase omega-1 OS=Sus scrofa GN... [more]
GSTO1_HUMAN5.313e-1230.41Glutathione S-transferase omega-1 OS=Homo sapiens ... [more]
GSTO1_RAT6.939e-1231.43Glutathione S-transferase omega-1 OS=Rattus norveg... [more]
GSTO1_CAEEL9.063e-1239.62Glutathione transferase omega-1 OS=Caenorhabditis ... [more]
GSTO1_MOUSE3.444e-1131.03Glutathione S-transferase omega-1 OS=Mus musculus ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_01C17_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001C17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617409 ID=DN617409; Name=DN617409; organism=Citrus sinensis; type=EST; length=667bp
CTTTCTTCTTCAAAGCAAAAGAAAAGCATTCAGGAAACCTCTAGAGTCTT
ACCTTCCTCAATGGCCACCACAGCGCAAGAGAATCTTCCTCCACCGTTGG
ATTCGAAGGCCGAGCTACCACCTCTGTTCGATGGAACTCCCAGGTTGTAC
ATTTCTTACTCGTGCCCATTTGCTCAGCGTGCGTGGATCACCAGGAACTA
CAAGGGATTACAAGACAAGATTAAGTTAGTTCCACTGAACCTCCAAGATA
GGCCCGCTTGGTACAAGGAGAAGGTTTATCCTGCTAACAAGGTTCCAGCA
CTGGAGCACAATGGCAAAGTTATTGGAGAATCTCTTGATTTGATTAAATA
TGTTGACAGCAATTTTGAAGGGCCTTCACTTTTACCTGATGATCCTGAGA
AACGAAAGATTGCTGATGAACTGTTTTCCCACATCGATACCTTCACCAAC
GATGTGTATACTTCATTCAAAGGAGACCCAGCAAAACAAGCTGGTCCTGC
TTTTGATTACTTAGAGAAGGCCCTTGATAAATTTGATGATGGCCCGTTCT
TCCTTGGACAGTTCAGTCAGGTGGACATAGCCTATATTCCATTTGTTGAG
AGATTCCAGATCTTCTTATCAGAAGAATTTAAGTATGACATCACTGCAGG
CAGGCCTAAACTGGCAG
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