DN617361

Overview
NameDN617361
Unique NameDN617361
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length492
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617361 vs. ExPASy Swiss-Prot
Match: CALS7_ARATH (Callose synthase 7 OS=Arabidopsis thaliana GN=CALS7 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 5.723e-20
Identity = 37/57 (64.91%), Postives = 45/57 (78.95%), Query Frame = -2
Query:  201 HEYLMRLPVFAPIAIFSWLPFASEFQTRLLFNQAFSRGLQISMIVTRRKD*DSNKLK 371
            +EY+M L +F PIA+ SW PF SEFQTRLLFNQAFSRGLQISMI+  +KD ++   K
Sbjct: 1877 YEYIMGLVIFTPIAVLSWFPFVSEFQTRLLFNQAFSRGLQISMILAGKKDKETPSTK 1933          

HSP 2 Score: 37.7354 bits (86), Expect = 5.723e-20
Identity = 15/22 (68.18%), Postives = 17/22 (77.27%), Query Frame = -1
Query:  373 GQVCRPLFKAIGFWDSTKELGR 438
            GQ  R +FK +GFWDS KELGR
Sbjct: 1854 GQALRSVFKGLGFWDSVKELGR 1875          
BLAST of DN617361 vs. ExPASy Swiss-Prot
Match: CALS6_ARATH (Putative callose synthase 6 OS=Arabidopsis thaliana GN=CALS6 PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 2.397e-17
Identity = 35/50 (70.00%), Postives = 40/50 (80.00%), Query Frame = -2
Query:  222 HEYLMRLPVFAPIAIFSWLPFASEFQTRLLFNQAFSRGLQISMIVTRRKD 371
            +E +M L +FAPIA+ SW P  SEFQ RLLFNQAFSRGLQISMI+  RKD
Sbjct: 1865 YENIMGLVIFAPIAVLSWFPIVSEFQARLLFNQAFSRGLQISMILAGRKD 1914          

HSP 2 Score: 34.2686 bits (77), Expect = 2.397e-17
Identity = 15/22 (68.18%), Postives = 16/22 (72.73%), Query Frame = -1
Query:  373 GQVCRPLFKAIGFWDSTKELGR 438
            GQV R   KA+G WDS KELGR
Sbjct: 1842 GQVLRSPIKALGVWDSVKELGR 1863          
BLAST of DN617361 vs. ExPASy Swiss-Prot
Match: CALS2_ARATH (Callose synthase 2 OS=Arabidopsis thaliana GN=CALS2 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 4.764e-14
Identity = 33/57 (57.89%), Postives = 42/57 (73.68%), Query Frame = -2
Query:  201 HEYLMRLPVFAPIAIFSWLPFASEFQTRLLFNQAFSRGLQISMIVTRRKD*DSNKLK 371
            +E LM L +F P+A  +W PF SEFQTR+LFNQAFSRGLQIS I+  ++   S+K K
Sbjct: 1894 YEILMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQRKDRSSKNK 1950          

HSP 2 Score: 30.0314 bits (66), Expect = 4.764e-14
Identity = 10/21 (47.62%), Postives = 14/21 (66.67%), Query Frame = -1
Query:  373 QVCRPLFKAIGFWDSTKELGR 435
            Q C+PL + +GFW S + L R
Sbjct: 1872 QACKPLIQRLGFWSSVRTLAR 1892          
BLAST of DN617361 vs. ExPASy Swiss-Prot
Match: CALS5_ARATH (Callose synthase 5 OS=Arabidopsis thaliana GN=CALS5 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 4.765e-14
Identity = 29/49 (59.18%), Postives = 37/49 (75.51%), Query Frame = -2
Query:  225 HEYLMRLPVFAPIAIFSWLPFASEFQTRLLFNQAFSRGLQISMIVTRRK 371
            +EY+M + +F P+ + +W PF SEFQTRLLFNQAFSRGLQI  I+   K
Sbjct: 1872 YEYIMGVVIFMPVTVLAWFPFVSEFQTRLLFNQAFSRGLQIQRILAGGK 1920          

HSP 2 Score: 30.4166 bits (67), Expect = 4.765e-14
Identity = 12/24 (50.00%), Postives = 14/24 (58.33%), Query Frame = -1
Query:  373 KFGQVCRPLFKAIGFWDSTKELGR 444
            +  QV RPL K +G W S K L R
Sbjct: 1847 QISQVARPLMKTVGMWGSVKALAR 1870          
BLAST of DN617361 vs. ExPASy Swiss-Prot
Match: CALS1_ARATH (Callose synthase 1 OS=Arabidopsis thaliana GN=CALS1 PE=1 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 5.006e-13
Identity = 32/57 (56.14%), Postives = 42/57 (73.68%), Query Frame = -2
Query:  201 HEYLMRLPVFAPIAIFSWLPFASEFQTRLLFNQAFSRGLQISMIVTRRKD*DSNKLK 371
            +E +M L +F P+A  +W PF SEFQTR+LFNQAFSRGLQIS I+  ++   S+K K
Sbjct: 1893 YEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQRKDRSSKNK 1949          

HSP 2 Score: 27.7202 bits (60), Expect = 5.006e-13
Identity = 9/21 (42.86%), Postives = 13/21 (61.90%), Query Frame = -1
Query:  373 QVCRPLFKAIGFWDSTKELGR 435
            Q C+PL + +G W S + L R
Sbjct: 1871 QACKPLIQQLGIWSSVRTLAR 1891          
BLAST of DN617361 vs. ExPASy Swiss-Prot
Match: CALS3_ARATH (Callose synthase 3 OS=Arabidopsis thaliana GN=CALS3 PE=2 SV=2)

HSP 1 Score: 65.4698 bits (158), Expect = 2.398e-12
Identity = 32/51 (62.75%), Postives = 39/51 (76.47%), Query Frame = -2
Query:  222 HEYLMRLPVFAPIAIFSWLPFASEFQTRLLFNQAFSRGLQISMIV-TRRKD 371
            +E +M L +F P+A  +W PF SEFQTR+LFNQAFSRGLQIS I+   RKD
Sbjct: 1907 YEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHRKD 1957          

HSP 2 Score: 26.1794 bits (56), Expect = 2.398e-12
Identity = 9/21 (42.86%), Postives = 12/21 (57.14%), Query Frame = -1
Query:  373 QVCRPLFKAIGFWDSTKELGR 435
            Q C+P+    GFW S + L R
Sbjct: 1885 QACKPVVHRAGFWGSVRTLAR 1905          
The following BLAST results are available for this feature:
BLAST of DN617361 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
CALS7_ARATH5.723e-2064.91Callose synthase 7 OS=Arabidopsis thaliana GN=CALS... [more]
CALS6_ARATH2.397e-1770.00Putative callose synthase 6 OS=Arabidopsis thalian... [more]
CALS2_ARATH4.764e-1457.89Callose synthase 2 OS=Arabidopsis thaliana GN=CALS... [more]
CALS5_ARATH4.765e-1459.18Callose synthase 5 OS=Arabidopsis thaliana GN=CALS... [more]
CALS1_ARATH5.006e-1356.14Callose synthase 1 OS=Arabidopsis thaliana GN=CALS... [more]
CALS3_ARATH2.398e-1262.75Callose synthase 3 OS=Arabidopsis thaliana GN=CALS... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_01B17_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001B17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617361 ID=DN617361; Name=DN617361; organism=Citrus sinensis; type=EST; length=492bp
TAATATTTTTAATATTTTTATCAAAATTATTATTAAAAATCATATTTACT
ACATACTATTTATTTTTATTTTATAATTACAGTTTTTTTCACAATAATTG
TAGTTACAACACCTCAATACCAAACAACACCTTAATTACTTCAACTTGAT
GACTACAAAACAACATTAAATAAAGGGATTAAAATGTGTGATACTATGAA
CTTCAATTTGTTGCTGTCTCAGTCTTTTCTCCTGGTGACAATCATAGAAA
TCTGGAGACCTCTGCTGAATGCTTGATTGAAGAGCAGGCGTGTTTGGAAC
TCAGATGCGAATGGAAGCCACGAGAAAATGGCTATGGGCGCGAAGACTGG
CAATCTCATTAGGTACTCGTGGTCTGCCTAGCTCCTTTGTTGAATCCCAA
AATCCTATTGCCTTAAACAATGGCCTGCAAACTTGCCCAAACTTGTAAGG
ACAAACCAAAATGAAATATGATTTAGCAAGCACTGTTCATCA
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