DN617342

Overview
NameDN617342
Unique NameDN617342
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length487
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6287 contig Csv1_Contig6287:87..573. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: ASPRX_ORYSJ (Aspartic proteinase OS=Oryza sativa subsp. japonica GN=RAP PE=2 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 7.267e-34
Identity = 70/149 (46.98%), Postives = 96/149 (64.43%), Query Frame = 1
Query:   40 EQKLLRSVFCLWVLASCLLLPASSNXXXXXXXXXXXXXXHSLNAARITRKERYMGGAGVSGVHHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            ++ LL    CLW L+  LLL ASS+                L AA++ ++   +          + G SD D +PL ++++ QY+G IG+GSPPQNF+VIFDTGSSNLWVPS+KCYFSI+CY HSRY S+KS++Y   G++C+I YGSG
Sbjct:    3 KRHLLLVTTCLWALSCALLLHASSDGFLRVNLNKKRLDKEDLTAAKLAQQGNRL---------LKTGSSDSDPVPLVDYLNTQYYGVIGLGSPPQNFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYNSKKSSSYKADGETCKITYGSG 142          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: CYPR1_CYNCA (Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO1 PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 1.515e-31
Identity = 60/89 (67.42%), Postives = 72/89 (80.90%), Query Frame = 1
Query:  220 GVHHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            GV     DSD +++ LKN+MDAQYFGEIGIG+PPQ F+VIFDTGSSNLWVPSSKCYFS++C FHS+Y+S  S TY + GKS  I YG+G
Sbjct:   28 GVRGNFRDSDGELIALKNYMDAQYFGEIGIGTPPQKFTVIFDTGSSNLWVPSSKCYFSVACLFHSKYRSTDSTTYKKNGKSAAIQYGTG 116          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: ASPR1_ORYSJ (Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 9.822e-31
Identity = 64/108 (59.26%), Postives = 84/108 (77.78%), Query Frame = 1
Query:  169 AARITRKE--RYMGGAGVSGVHHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            AAR++ +E  R +G  G + +    G  + DI+ LKN+M+AQYFGEIG+G+PPQ F+VIFDTGSSNLWVPS+KCYFSI+C+FHSRYKS +S+TY + GK   I YG+G
Sbjct:   45 AARLSGEEGARRLGLRGANSLGG--GGGEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACFFHSRYKSGQSSTYQKNGKPAAIQYGTG 150          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: ASPR_HORVU (Phytepsin OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 8.315e-30
Identity = 57/91 (62.64%), Postives = 73/91 (80.22%), Query Frame = 1
Query:  214 VSGVHHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            +SG +    + + DI+ LKN+M+AQYFGEIG+G+PPQ F+VIFDTGSSNLWVPS+KCYFSI+CY HSRYK+  S+TY + GK   I YG+G
Sbjct:   59 LSGANPLRSEEEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYKAGASSTYKKNGKPAAIQYGTG 149          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: ASPR_CUCPE (Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 6.167e-25
Identity = 63/144 (43.75%), Postives = 92/144 (63.89%), Query Frame = 1
Query:   67 CLWVLASCLLLPASSNXXXXXXXXXXXXXX-HSLNAARITRKERYMGGAGVSGVHHR--LGDS-DEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            CL++L S  ++ ++SN                +  AAR+  K+  +  A     + +  LG+S D DI+ LKN++DAQY+GEI IG+PPQ F+VIFDTGSSNLWV   +C FS++C+FH+RYKS +S++Y + G S  I YG+G
Sbjct:   12 CLFLLVSFNIVSSASNDGLLRVGLKKIKLDPENRLAARVESKDAEILKAAFRKYNPKGNLGESSDTDIVALKNYLDAQYYGEIAIGTPPQKFTVIFDTGSSNLWV-LCECLFSVACHFHARYKSSRSSSYKKNGTSASIRYGTG 154          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: CATD_HUMAN (Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.286e-22
Identity = 48/75 (64.00%), Postives = 60/75 (80.00%), Query Frame = 1
Query:  265 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            LKN+MDAQY+GEIGIG+PPQ F+V+FDTGSSNLWVPS  C    I+C+ H +Y S KS+TY + G S +I+YGSG
Sbjct:   71 LKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSG 145          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: CATD_CANFA (Cathepsin D OS=Canis familiaris GN=CTSD PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.864e-22
Identity = 47/75 (62.67%), Postives = 60/75 (80.00%), Query Frame = 1
Query:  265 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            L+N+MDAQY+GEIGIG+PPQ F+V+FDTGSSNLWVPS  C    I+C+ H +Y S KS+TY + G S +I+YGSG
Sbjct:   71 LRNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSGKSSTYVKNGTSFDIHYGSG 145          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: CATD_RAT (Cathepsin D OS=Rattus norvegicus GN=Ctsd PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 3.741e-22
Identity = 47/75 (62.67%), Postives = 60/75 (80.00%), Query Frame = 1
Query:  265 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            LKN++DAQY+GEIGIG+PPQ F+V+FDTGSSNLWVPS  C    I+C+ H +Y S KS+TY + G S +I+YGSG
Sbjct:   71 LKNYLDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWVHHKYNSDKSSTYVKNGTSFDIHYGSG 145          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: CARP_NEUCR (Vacuolar protease A OS=Neurospora crassa GN=pep-4 PE=3 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 4.886e-22
Identity = 47/76 (61.84%), Postives = 61/76 (80.26%), Query Frame = 1
Query:  259 LPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            +P+ NFM+AQYF EI IG+PPQ F V+ DTGSSNLWVPSS+C  SI+CY H++Y+S +S+TY + G S +I YGSG
Sbjct:   75 VPITNFMNAQYFSEITIGTPPQTFKVVLDTGSSNLWVPSSQC-GSIACYLHNKYESSESSTYKKNGTSFKIEYGSG 149          
BLAST of DN617342 vs. ExPASy Swiss-Prot
Match: CATD_PIG (Cathepsin D OS=Sus scrofa GN=CTSD PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 6.381e-22
Identity = 47/75 (62.67%), Postives = 59/75 (78.67%), Query Frame = 1
Query:  265 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEMGKSCEINYGSG 486
            LKN+MDAQY+GEIGIG+PPQ F+V+FDTGSSNLWVPS  C    I+C+ H +Y S KS+TY + G +  I+YGSG
Sbjct:    7 LKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSGKSSTYVKNGTTFAIHYGSG 81          
The following BLAST results are available for this feature:
BLAST of DN617342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
ASPRX_ORYSJ7.267e-3446.98Aspartic proteinase OS=Oryza sativa subsp. japonic... [more]
CYPR1_CYNCA1.515e-3167.42Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO... [more]
ASPR1_ORYSJ9.822e-3159.26Aspartic proteinase oryzasin-1 OS=Oryza sativa sub... [more]
ASPR_HORVU8.315e-3062.64Phytepsin OS=Hordeum vulgare PE=1 SV=1[more]
ASPR_CUCPE6.167e-2543.75Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1[more]
CATD_HUMAN1.286e-2264.00Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1[more]
CATD_CANFA2.864e-2262.67Cathepsin D OS=Canis familiaris GN=CTSD PE=2 SV=1[more]
CATD_RAT3.741e-2262.67Cathepsin D OS=Rattus norvegicus GN=Ctsd PE=1 SV=1[more]
CARP_NEUCR4.886e-2261.84Vacuolar protease A OS=Neurospora crassa GN=pep-4 ... [more]
CATD_PIG6.381e-2262.67Cathepsin D OS=Sus scrofa GN=CTSD PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01B07_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617342 ID=DN617342; Name=DN617342; organism=Citrus sinensis; type=EST; length=487bp
TTCAAACTCAGCTTCAGCAGAAAACCAAAGAACATCATGGAGCAGAAACT
TCTTCGGTCAGTTTTCTGTTTATGGGTGCTAGCGTCGTGCTTGCTTCTTC
CTGCTTCCTCTAATGGCTTACGGAGAATTGGCTTGAAGAAGCGGCGTCTA
GATCTTCATAGTCTAAATGCTGCAAGAATAACAAGAAAAGAGCGATATAT
GGGGGGAGCAGGTGTTAGTGGCGTGCACCATCGTTTGGGTGATTCAGATG
AAGATATTTTGCCTTTGAAGAACTTTATGGATGCTCAATACTTTGGAGAG
ATTGGTATTGGCTCTCCCCCACAAAATTTCAGTGTCATATTTGATACCGG
CAGTTCCAATCTCTGGGTTCCATCTTCAAAGTGCTATTTCTCTATTTCCT
GCTATTTCCATTCGAGGTACAAGTCCAGAAAATCCAATACATATACCGAA
ATGGGAAAATCCTGTGAAATAAACTATGGATCTGGAT
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