DN617325

Overview
NameDN617325
Unique NameDN617325
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length411
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2614 contig Csv1_Contig2614:263..674. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of DN617325 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.892e-12
Identity = 29/47 (61.70%), Postives = 36/47 (76.60%), Query Frame = -2 
Query:  270 GSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 410
            GSSY AD +ET+ S ++  VVMD  AAE +G CKCGP+C+C NCTCG
Sbjct:   20 GSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64
The following BLAST results are available for this feature:
BLAST of DN617325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MT3_CARPA8.892e-1261.70Metallothionein-like protein type 3 OS=Carica papa... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_01A23_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617325 ID=DN617325; Name=DN617325; organism=Citrus sinensis; type=EST; length=411bp
ATAATACATTAAAATTAAACCACACAAGGCCACGGTCATGGCCATGGCCA
TATATTACATGATTATGAAGAAGGAAACACAAAACATTACGAGTGATGGG
TGACACAACACGCACATCACTCCACACACTAGTAGTAGACCATCATAAAA
ACGAAGTAGAGAATTTTTCTTTTTTTTTAATCACCCTTACATTATTCTTA
ACCCCCACAATATTTAGGCACACTTGCAGCTTCTTATTTTTTGCTGCATG
TGTTTGCTTATTAGTGACTACCACAAGTGCAGTTCACACAAGCGCAGGTG
GGGCCGCACTTGCAGTTACCTTCAGTCTCAGCAGCCTGAACGTCCATGAC
AACGACGGTGCTGACAAAGCTCAAGTCAGTCTCGACGAAGTCAGCAGCAT
AGCTGCTTCCC
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