DN617310
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617310 vs. ExPASy Swiss-Prot
Match: FER3_MAIZE (Ferredoxin-3, chloroplastic OS=Zea mays GN=FDX3 PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 2.441e-43 Identity = 87/125 (69.60%), Postives = 99/125 (79.20%), Query Frame = -1 Query: 195 VKSPRSL--VSRXXXXXXXXXXXXXXXXAMAVYKVKLIGPDGEENEFDAPDDAYILDSAEDAGMELPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 563 VKSP SL S+ AMAVYKVKL+GP+GEE+EFDAPDDAYILD+AE AG+ELPYSCRAGACSTCAG + SGSVDQSDGSFLDD Q E+GYVLTC++YPKSDCVI+THKE + Sbjct: 26 VKSPSSLSFFSQVTKVPSLKTSKKLDVSAMAVYKVKLVGPEGEEHEFDAPDDAYILDAAETAGVELPYSCRAGACSTCAGKIESGSVDQSDGSFLDDGQQEEGYVLTCVSYPKSDCVIHTHKEGD 150
BLAST of DN617310 vs. ExPASy Swiss-Prot
Match: FER3_ARATH (Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana GN=FD3 PE=1 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.134e-40 Identity = 73/95 (76.84%), Postives = 90/95 (94.74%), Query Frame = -1 Query: 195 AVYKVKLIGPDGEENEFDAPDDAYILDSAEDAGMELPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 479 AVYKVKL+GPDG+E+EF+ DD YILD+AE+AG++LPYSCRAGACSTCAG +VSG+VDQSDGSFL+D+ +EKGYVLTC+AYP+SDCVI+THKE+E Sbjct: 59 AVYKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDGSFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETE 153
BLAST of DN617310 vs. ExPASy Swiss-Prot
Match: FER1_RAPSA (Ferredoxin, root R-B1 OS=Raphanus sativus PE=1 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 4.308e-40 Identity = 74/95 (77.89%), Postives = 85/95 (89.47%), Query Frame = -1 Query: 195 AVYKVKLIGPDGEENEFDAPDDAYILDSAEDAGMELPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 479 AVYKVKLIGPDG+ENEFD PDD YILD+AE+AG++LPYSCRAGACSTCAG + G VDQSDGSFL+D+ EKGYVLTC+AYP+SD VI+THKE E Sbjct: 2 AVYKVKLIGPDGQENEFDVPDDQYILDAAEEAGVDLPYSCRAGACSTCAGKIEKGQVDQSDGSFLEDHHFEKGYVLTCVAYPQSDLVIHTHKEEE 96
BLAST of DN617310 vs. ExPASy Swiss-Prot
Match: FER2_RAPSA (Ferredoxin, root R-B2 OS=Raphanus sativus PE=1 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 3.647e-39 Identity = 71/95 (74.74%), Postives = 87/95 (91.58%), Query Frame = -1 Query: 195 AVYKVKLIGPDGEENEFDAPDDAYILDSAEDAGMELPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 479 AVYKVKLIGP+GEENEF+ DD +ILD+AE+AG++LPYSCRAGACSTCAG +V G VDQS+GSFL+D+ EKG+VLTC+AYP+SDCVI+THKE+E Sbjct: 2 AVYKVKLIGPEGEENEFEVQDDQFILDAAEEAGVDLPYSCRAGACSTCAGQIVKGQVDQSEGSFLEDDHFEKGFVLTCVAYPQSDCVIHTHKETE 96
BLAST of DN617310 vs. ExPASy Swiss-Prot
Match: FER6_MAIZE (Ferredoxin-6, chloroplastic OS=Zea mays GN=FDX6 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.614e-37 Identity = 67/94 (71.28%), Postives = 85/94 (90.43%), Query Frame = -1 Query: 195 VYKVKLIGPDGEENEFDAPDDAYILDSAEDAGMELPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 476 ++KVKL+GPDG E+EF+APDD YIL++AE AG+ELP+SCRAG+CSTCAG M +G VDQS+GSFLDD QM +GY+LTCI+YPK+DCVI+THKE + Sbjct: 60 LHKVKLVGPDGTEHEFEAPDDTYILEAAETAGVELPFSCRAGSCSTCAGRMSAGEVDQSEGSFLDDGQMAEGYLLTCISYPKADCVIHTHKEED 153
BLAST of DN617310 vs. ExPASy Swiss-Prot
Match: FER_SYNY4 (Ferredoxin OS=Synechocystis sp. (strain PCC 6714) PE=1 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 2.705e-34 Identity = 68/96 (70.83%), Postives = 79/96 (82.29%), Query Frame = -1 Query: 195 MAVYKVKLIGPDGEENEFDAPDDAYILDSAEDAGMELPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 482 MA Y VKLI PDGE N + DD YILD+AE+AG++LPYSCRAGACSTCAG + +GSVDQSD SFLDD+Q+E GYVLTC+AYP SDC I THKE + Sbjct: 1 MASYTVKLITPDGE-NSIECSDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITAGSVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEED 95
BLAST of DN617310 vs. ExPASy Swiss-Prot
Match: FER_SYNY3 (Ferredoxin-1 OS=Synechocystis sp. (strain PCC 6803) GN=petF PE=1 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 1.028e-33 Identity = 67/96 (69.79%), Postives = 79/96 (82.29%), Query Frame = -1 Query: 195 MAVYKVKLIGPDGEENEFDAPDDAYILDSAEDAGMELPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 482 MA Y VKLI PDGE + + DD YILD+AE+AG++LPYSCRAGACSTCAG + +GSVDQSD SFLDD+Q+E GYVLTC+AYP SDC I THKE + Sbjct: 1 MASYTVKLITPDGESS-IECSDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITAGSVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEED 95
BLAST of DN617310 vs. ExPASy Swiss-Prot
Match: FER_THEVL (Ferredoxin-1 OS=Thermosynechococcus vulcanus GN=petF1 PE=3 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 1.342e-33 Identity = 63/96 (65.62%), Postives = 78/96 (81.25%), Query Frame = -1 Query: 195 MAVYKVKLIGPDGEENEFDAPDDAYILDSAEDAGMELPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 482 MA YKV L+ PDG E D P+D YILD AE+ G++LP+SCRAGACSTCAG ++ G VDQSD SFLDD+Q+EKG+VLTC+AYP+SDC I T++E E Sbjct: 1 MATYKVTLVRPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSDCKILTNQEEE 96
BLAST of DN617310 vs. ExPASy Swiss-Prot
Match: FER_THEEB (Ferredoxin-1 OS=Thermosynechococcus elongatus (strain BP-1) GN=petF1 PE=1 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 1.342e-33 Identity = 63/96 (65.62%), Postives = 78/96 (81.25%), Query Frame = -1 Query: 195 MAVYKVKLIGPDGEENEFDAPDDAYILDSAEDAGMELPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 482 MA YKV L+ PDG E D P+D YILD AE+ G++LP+SCRAGACSTCAG ++ G VDQSD SFLDD+Q+EKG+VLTC+AYP+SDC I T++E E Sbjct: 1 MATYKVTLVRPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSDCKILTNQEEE 96
BLAST of DN617310 vs. ExPASy Swiss-Prot
Match: FER_SYNEN (Ferredoxin-1 OS=Synechococcus elongatus naegeli GN=petF1 PE=3 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 1.342e-33 Identity = 63/96 (65.62%), Postives = 78/96 (81.25%), Query Frame = -1 Query: 195 MAVYKVKLIGPDGEENEFDAPDDAYILDSAEDAGMELPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 482 MA YKV L+ PDG E D P+D YILD AE+ G++LP+SCRAGACSTCAG ++ G VDQSD SFLDD+Q+EKG+VLTC+AYP+SDC I T++E E Sbjct: 1 MATYKVTLVRPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSDCKILTNQEEE 96 The following BLAST results are available for this feature:
BLAST of DN617310 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617310 ID=DN617310; Name=DN617310; organism=Citrus sinensis; type=EST; length=563bpback to top |