DN617295
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617295 vs. ExPASy Swiss-Prot
Match: C3H24_ARATH (Zinc finger CCCH domain-containing protein 24 OS=Arabidopsis thaliana GN=At2g28450 PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 1.609e-46 Identity = 101/150 (67.33%), Postives = 115/150 (76.67%), Query Frame = -2 Query: 135 IADSNCPEGSGK--EPQSQLQKDCTS-EGNSLAQP-FKNVVAIVDPPRGGLHPTVIKILRTHARLQRLVYISCNPETLVANAIELCTPSPDKIEK-NKDNRGWRNMSSAGLARHRAKSMPISKPFQPVKAMAVDLFPHTSHCEMVMLLER 569 +AD N P + + E Q QKD +S E +P FKNVVAIVDPPR GLHP VIK LRTH RL+RLVYISCNPETLVANAIELCTPS D+ ++ NK+ RG + + A LARHRAKSMP S+ F+PVKAMAVDLFPHT HCEMVMLLER Sbjct: 660 VADQNLPPSNTQVEELQDNEQKDSSSLEPEKTTKPQFKNVVAIVDPPRSGLHPAVIKALRTHPRLKRLVYISCNPETLVANAIELCTPSFDEPDRGNKNYRGRKKIGIAALARHRAKSMPTSEAFRPVKAMAVDLFPHTDHCEMVMLLER 809
BLAST of DN617295 vs. ExPASy Swiss-Prot
Match: TRM2A_HUMAN (tRNA (uracil-5-)-methyltransferase homolog A OS=Homo sapiens GN=TRMT2A PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 7.791e-17 Identity = 44/112 (39.29%), Postives = 63/112 (56.25%), Query Frame = -2 Query: 135 KNVVAIVDPPRGGLHPTVIKILRTHARLQRLVYISCNPETLVANAIELCTPSPDKIEKNKDNRGWRNMSSAGLARHRAKSMPISKPFQPVKAMAVDLFPHTSHCEMVMLLER 470 +++VAI+DPPR GLH VI +R L+RL+Y+SCNP + N ++LC ++++ PF+PVKA+AVDLFP T HCEM++L ER Sbjct: 503 QHLVAILDPPRAGLHSKVILAIRRAKNLRRLLYVSCNPRAAMGNFVDLCRAPSNRVK--------------------------GIPFRPVKAVAVDLFPQTPHCEMLILFER 588
BLAST of DN617295 vs. ExPASy Swiss-Prot
Match: TRM2_DANRE (tRNA (uracil-5-)-methyltransferase homolog OS=Danio rerio GN=Trmt2b PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.375e-13 Identity = 44/111 (39.64%), Postives = 60/111 (54.05%), Query Frame = -2 Query: 135 VVAIVDPPRGGLHPTVIKILRTHARLQRLVYISCNPE-TLVANAIELCTPSPDKIEKNKDNRGWRNMSSAGLARHRAKSMPISKPFQPVKAMAVDLFPHTSHCEMVMLLER 464 + A+V+P R GLH V++ LR H+ ++RLVYISC P+ + N ELC S GL R + F+PV A+ VDLFPHT HCE+V++ ER Sbjct: 387 LTAVVNPSRAGLHYRVVRALRNHSAIRRLVYISCKPDGEAMRNFRELC-------------------CSVGLVRRIT-----GEAFKPVVAVPVDLFPHTPHCELVLVFER 473 The following BLAST results are available for this feature:
BLAST of DN617295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617295 ID=DN617295; Name=DN617295; organism=Citrus sinensis; type=EST; length=606bpback to top |