DN135278

Overview
NameDN135278
Unique NameDN135278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length365
Libraries
Library NameType
Mature Juice Sac from Navel Orange in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2614 contig Csv1_Contig2614:141..505. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135278 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.713e-23
Identity = 46/66 (69.70%), Postives = 54/66 (81.82%), Query Frame = 1
Query:   67 MSDTCGNCDCADRSQCVKKGSSYAADFFETDLSFVSTAVVMDVQAAEAEGNCKCGPTCACVNCTCG 264
            MSDTCGNCDCAD++QCVKKGSSY AD  ET+ S ++  VVMD  AAE +G CKCGP+C+C NCTCG
Sbjct:    1 MSDTCGNCDCADKTQCVKKGSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64          
BLAST of DN135278 vs. ExPASy Swiss-Prot
Match: MT3_ACTDE (Metallothionein-like protein type 3 OS=Actinidia deliciosa GN=pKIWI503 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.659e-18
Identity = 43/65 (66.15%), Postives = 48/65 (73.85%), Query Frame = 1
Query:   67 MSDTCGNCDCADRSQCVKKGSSYAADFFETDLSFVSTAVVMDVQAAEAEGNCKCGPTCACVNCTC 261
            MSD CGNCDCAD SQCVKKG+S   D  ETD S++   VVM V AAE+ G CKCG +C CVNCTC
Sbjct:    1 MSDKCGNCDCADSSQCVKKGNSI--DIVETDKSYIED-VVMGVPAAESGGKCKCGTSCPCVNCTC 62          
BLAST of DN135278 vs. ExPASy Swiss-Prot
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.696e-18
Identity = 37/64 (57.81%), Postives = 47/64 (73.44%), Query Frame = 1
Query:   76 TCGNCDCADRSQCVKKGSSYAADFFETDLSFVSTAVVMDVQAAEAEGNCKCGPTCACVNCTCGS 267
            TCGNCDC D+SQCVKKG+SY  D  ET+ S+V   V++  +AAE +G CKCG  CAC +C CG+
Sbjct:    3 TCGNCDCVDKSQCVKKGNSYGIDIVETEKSYVD-EVIVAAEAAEHDGKCKCGAACACTDCKCGN 65          
BLAST of DN135278 vs. ExPASy Swiss-Prot
Match: MT3_PRUAV (Metallothionein-like protein 1 OS=Prunus avium GN=MT1 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.519e-16
Identity = 37/65 (56.92%), Postives = 44/65 (67.69%), Query Frame = 1
Query:   67 MSDTCGNCDCADRSQCVKKGSSYAADFFETDLSFVSTAVVMDVQAAEAEGNCKCGPTCACVNCTC 261
            MS  C NCDC+D SQC KKG S+     ET+   + T V+MD  AAE  GNCKCGP+CACV+C C
Sbjct:    1 MSSKCSNCDCSDSSQCTKKGYSFDLVIVETENRSMDT-VIMDAPAAENGGNCKCGPSCACVDCKC 64          
BLAST of DN135278 vs. ExPASy Swiss-Prot
Match: MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica GN=MT2 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.007e-15
Identity = 37/66 (56.06%), Postives = 45/66 (68.18%), Query Frame = 1
Query:   67 MSDTCGNCDCADRSQCVKKGSSYAADFFETDLSFVSTAVVMDVQAAEAEGNCKCGPTCACVNCTCG 264
            MS  C NCDCAD +QCVKKG+SY     ET+   + T V +D  AAE +G CKCG  C+CV+CTCG
Sbjct:    1 MSGKCDNCDCADSTQCVKKGNSYDLVIVETENRSMDT-VFVDAPAAEHDGKCKCGTGCSCVSCTCG 65          
BLAST of DN135278 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSJ (Metallothionein-like protein 3A OS=Oryza sativa subsp. japonica GN=MT3A PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.717e-15
Identity = 35/66 (53.03%), Postives = 42/66 (63.64%), Query Frame = 1
Query:   67 MSDTCGNCDCADRSQCVKKGSSYAADFFETDLSFVSTAVVMDVQAAEAEGNCKCGPTCACVNCTCG 264
            MSD CGNCDCAD+SQCVKKG+SY     E + S        +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of DN135278 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSI (Metallothionein-like protein 3A OS=Oryza sativa subsp. indica GN=MT3A PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.717e-15
Identity = 35/66 (53.03%), Postives = 42/66 (63.64%), Query Frame = 1
Query:   67 MSDTCGNCDCADRSQCVKKGSSYAADFFETDLSFVSTAVVMDVQAAEAEGNCKCGPTCACVNCTCG 264
            MSD CGNCDCAD+SQCVKKG+SY     E + S        +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of DN135278 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSJ (Metallothionein-like protein 3B OS=Oryza sativa subsp. japonica GN=MT3B PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.607e-13
Identity = 33/66 (50.00%), Postives = 40/66 (60.61%), Query Frame = 1
Query:   67 MSDTCGNCDCADRSQCVKKGSSYAADFFETDLSFVSTAVVMDVQAAEAEGNCKCGPTCACVNCTCG 264
            MSD CGNCDCAD+SQCVKKG+SY     + + S    A   +V   E +G CKC   C+C  C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVDAEKSHFEMA--EEVGYEENDGKCKCTTGCSCAGCNCG 64          
BLAST of DN135278 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSI (Metallothionein-like protein 3B OS=Oryza sativa subsp. indica GN=MT3B PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.107e-13
Identity = 32/66 (48.48%), Postives = 40/66 (60.61%), Query Frame = 1
Query:   67 MSDTCGNCDCADRSQCVKKGSSYAADFFETDLSFVSTAVVMDVQAAEAEGNCKCGPTCACVNCTCG 264
            MSD CG+CDCAD+SQCVKKG+SY     + + S    A   +V   E +G CKC   C+C  C CG
Sbjct:    1 MSDKCGHCDCADKSQCVKKGTSYGVVIVDAEKSHFEMA--EEVGYEENDGKCKCTTGCSCAGCNCG 64          
The following BLAST results are available for this feature:
BLAST of DN135278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
MT3_CARPA1.713e-2369.70Metallothionein-like protein type 3 OS=Carica papa... [more]
MT3_ACTDE1.659e-1866.15Metallothionein-like protein type 3 OS=Actinidia d... [more]
MT3_MUSAC3.696e-1857.81Metallothionein-like protein type 3 OS=Musa acumin... [more]
MT3_PRUAV4.519e-1656.92Metallothionein-like protein 1 OS=Prunus avium GN=... [more]
MT3_MALDO1.007e-1556.06Metallothionein-like protein type 3 OS=Malus domes... [more]
MT3A_ORYSJ1.717e-1553.03Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3A_ORYSI1.717e-1553.03Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3B_ORYSJ1.607e-1350.00Metallothionein-like protein 3B OS=Oryza sativa su... [more]
MT3B_ORYSI6.107e-1348.48Metallothionein-like protein 3B OS=Oryza sativa su... [more]
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Properties
Property NameValue
Genbank descriptionwca08h11 Mature Juice Sac from Navel Orange in Vulnus5 vector Citrus sinensis cDNA clone wca08h11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135278 ID=DN135278|Name=DN135278|organism=Citrus sinensis|type=EST|length=365bp
CAAGTTTCGTACAATAAAGAGCCCTCTATTTCCAGTTTNNNATTCCAAGT
TCTAAGCTCAATCAACATGTCGGACACCTGCGGCAACTGCGACTGCGCTG
ACAGGAGCCAGTGTGTGAAGAAGGGAAGCAGCTATGCTGCTGACTTCTTC
GAGACTGACTTGAGCTTTGTCAGCACCGCTGTTGTCATGGACGTTCAGGC
TGCTGAGGCTGAAGGTAACTGCAAGTGCGGCCCCACCTGCGCTTGTGTGA
ACTGCACTTGTGGTAGTCACTAATAAGCAAACACATGCAGCAAAAAATAA
GAAGCTGCAAGTGTGCCTAAATATTGTGGGGGTTAAGAATAATGTAGGGG
TGATTAAAAAAAAAA
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