DN135262

Overview
NameDN135262
Unique NameDN135262
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length210
Libraries
Library NameType
Mature Juice Sac from Navel Orange in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2614 contig Csv1_Contig2614:135..344. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of DN135262 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.151e-12
Identity = 32/46 (69.57%), Postives = 38/46 (82.61%), Query Frame = 1 
Query:   73 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAA 210
            MSDTCGNCDCAD++QCVKKGSSY AD +ET+ S ++  VVMD  AA
Sbjct:    1 MSDTCGNCDCADKTQCVKKGSSYTADIIETEKSIMT--VVMDAPAA 44
The following BLAST results are available for this feature:
BLAST of DN135262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MT3_CARPA5.151e-1269.57Metallothionein-like protein type 3 OS=Carica papa... [more]
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Properties
Property NameValue
Genbank descriptionwca08g04 Mature Juice Sac from Navel Orange in Vulnus5 vector Citrus sinensis cDNA clone wca08g04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135262 ID=DN135262; Name=DN135262; organism=Citrus sinensis; type=EST; length=210bp
GCAAAGCAAGTTTCGTACAATAAAGAGCCCTNNNTTTCCAGTTTTAAATT
CCAAGTTCTAAGCTCAATCAACATGTCGGACACCTGCGGCAACTGCGACT
GCGCTGACAGGAGCCAGTGTGTGAAGAAGGGAAGCAGCTATGCTGCTGAC
TTCGTCGAGACTGACTTGAGCTTTGTCAGCACCGTTGTTGTCATGGACGT
TCAGGCTGCT
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