DN135251

Overview
NameDN135251
Unique NameDN135251
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length561
Libraries
Library NameType
Mature Juice Sac from Navel Orange in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6203 contig Csv1_Contig6203:3..563. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135251 vs. ExPASy Swiss-Prot
Match: Y4967_ARATH (Uncharacterized oxidoreductase At4g09670 OS=Arabidopsis thaliana GN=At4g09670 PE=1 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 2.476e-64
Identity = 117/167 (70.06%), Postives = 143/167 (85.63%), Query Frame = 3
Query:   60 MATESQAAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHVKWAIFVAQKKKHLLMEKPVALNVAEFDVILKACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCFSFAGD 560
            MATE+Q  IR G++G ADIARK+SRAI LAPNA +S VASRSLEKA  FA ANN+P   K++GSYE+LL+D +IDA+Y+PLPTS+HV+WAI  A+K KH+L+EKPVA+NV EFD I+ ACE NGVQ+MDGTMWVHNPRTA +KEF+SD +RFGQL+T+ SCFSFAGD
Sbjct:    1 MATETQ--IRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTSLHVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQIMDGTMWVHNPRTALLKEFLSDSERFGQLKTVQSCFSFAGD 165          
BLAST of DN135251 vs. ExPASy Swiss-Prot
Match: YMO1_RHIME (Uncharacterized oxidoreductase ORF334 OS=Rhizobium meliloti PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 7.058e-19
Identity = 56/156 (35.90%), Postives = 92/156 (58.97%), Query Frame = 3
Query:   84 IRFGIIGAADIA-RKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHVKWAIFVAQKKKHLLMEKPVALNVAEFDVILKACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCFS 548
            +RFGIIG A IA  K+  ++  A    + A+ASR L++A   A A  F    + YGSY+ +L D +I+AVY+PLP  +HV WAI  A+  KH+L EKP+AL+V E   ++   +  G ++ +  M   +P+  ++ + V+  +  G++R +   F+
Sbjct:    4 VRFGIIGTAAIAVEKVIPSMLSAEGLEVVAIASRDLDRAR--AAATRFGI-GRSYGSYDEILADPEIEAVYIPLPNHLHVHWAIRAAEAGKHVLCEKPLALDVEELSRLIDCRDRTGRRIQEAVMIRAHPQWDEIFDIVASGE-IGEVRAIQGVFT 155          
BLAST of DN135251 vs. ExPASy Swiss-Prot
Match: DHDH_DANRE (Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase OS=Danio rerio GN=dhdh PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 3.393e-13
Identity = 48/160 (30.00%), Postives = 82/160 (51.25%), Query Frame = 3
Query:   81 AIRFGIIGAADIARKLSRAITLAP--NAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHVKWAIFVAQKKKHLLMEKPVALNVAEFDVILKACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCFSFA 554
            A+R+GI  A  I+   + A+   P     + AVA+R L  A  FA+ ++ P   + YGSYE L +D +ID VY+      H++  +     KK++L EKP+A+N+ E   ++ A   + V LM+       P + ++   +S     GQ++ + + F  A
Sbjct:    2 ALRWGICSAGKISHDFTVALRTLPAEQHQVVAVAARELAHAQEFAQKHSIP---RAYGSYEELAEDPEIDVVYVGTIHPHHLRVGLLFMNAKKNVLCEKPLAMNLKEVQQMISAARRSDVFLMEAVWTRFFPASLEISRLLSQ-NAVGQVKLVRADFGAA 157          
BLAST of DN135251 vs. ExPASy Swiss-Prot
Match: DHDH_XENTR (Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase OS=Xenopus tropicalis GN=dhdh PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.431e-13
Identity = 44/124 (35.48%), Postives = 68/124 (54.84%), Query Frame = 3
Query:   81 AIRFGIIGAADIARKLSRAITLAP--NAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHVKWAIFVAQKKKHLLMEKPVALNVAEFDVILKACEENGVQLMD 446
            A ++GI  A  I+     A++  P  +  + A+A+R LEKA NFA+ +N P   K YGSYE L  D DID +Y+     +H    +   Q  K++L EKP+A+N A+   ++    +  V LM+
Sbjct:    2 ATKWGICSAGKISNDFVVALSTLPAVDHQVVAIAARDLEKAKNFAQNHNIP---KAYGSYEELAKDPDIDVIYVGAIHPVHRDVVLMCLQNGKNILCEKPLAMNAAQVQELIATARKFNVFLME 122          
BLAST of DN135251 vs. ExPASy Swiss-Prot
Match: DHDH_XENLA (Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase OS=Xenopus laevis GN=dhdh PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.289e-12
Identity = 45/124 (36.29%), Postives = 68/124 (54.84%), Query Frame = 3
Query:   81 AIRFGIIGAADIARKLSRAITLAP--NAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHVKWAIFVAQKKKHLLMEKPVALNVAEFDVILKACEENGVQLMD 446
            A ++GI     I+     A++  P  +  + AVA+R LEKA NFA+ +N P   K YGSYE L  D DID +Y+     +H    +   Q  K++L EKP+A+N A+   ++ A  +  V LM+
Sbjct:    2 ATKWGICSTGRISNDFVVALSTLPAVDHQVVAVAARDLEKAKNFAQIHNIP---KAYGSYEELAKDPDIDVIYVGAIHPVHRDVVLMCLQNGKNVLCEKPLAMNSAQVRELIAAARKFNVFLME 122          
BLAST of DN135251 vs. ExPASy Swiss-Prot
Match: YGJR_ECOLI (Uncharacterized oxidoreductase ygjR OS=Escherichia coli (strain K12) GN=ygjR PE=3 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 8.357e-12
Identity = 45/121 (37.19%), Postives = 66/121 (54.55%), Query Frame = 3
Query:   84 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHVKWAIFVAQKKKHLLMEKPVALNVAEFDVILKACEENGVQLMD 446
            IRF +IG   I R+   A   +    L+AV SRSLE+A +FA  N+F  +  ++ S EA+ +   IDAVY+  P S+H          K +++ EKP+A N+AE D  +    EN V L +
Sbjct:    2 IRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFA--NDFSVE-HLFTSLEAMAESDAIDAVYIASPNSLHFSQTQLFLSHKINVICEKPLASNLAEVDAAIACARENQVVLFE 119          
BLAST of DN135251 vs. ExPASy Swiss-Prot
Match: YULF_BACSU (Uncharacterized oxidoreductase yulF OS=Bacillus subtilis GN=yulF PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 2.431e-11
Identity = 43/136 (31.62%), Postives = 66/136 (48.53%), Query Frame = 3
Query:   84 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHVKWAIFVAQKKKHLLMEKPVALNVAEFDVILKACEENGVQLMDGTMWVHNPRTAQMKE 491
            IRF IIG   I  +   +     +  L+AV SRS E+A  FA  +N    A  +   + +      DAVY+  P ++H + A+      KH+L EKP A N  E + ++ A + NGV LM+       P   ++K+
Sbjct:    2 IRFAIIGTNWITDRFLESAADIEDFQLTAVYSRSAERAGEFAAKHNA---AHAFSDLQEMAASDCFDAVYIASPNALHKEQAVLFMNHGKHVLCEKPFASNTKETEEMISAAKANGVVLMEAMKTTFLPNFKELKK 134          
BLAST of DN135251 vs. ExPASy Swiss-Prot
Match: DHDH_MOUSE (Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase OS=Mus musculus GN=Dhdh PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.175e-11
Identity = 48/159 (30.19%), Postives = 74/159 (46.54%), Query Frame = 3
Query:   81 AIRFGIIGAADIARKLSRAITLAPNAV--LSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHVKWAIFVAQKKKHLLMEKPVALNVAEFDVILKACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCFSF 551
            A+R+GI+ A  IA   +  ++  P++   + AVA+R L +A  FA+  N P   K YGSYE L  D +++  Y+      H    +      K +L EKP+ +N AE   ++      GV LM+       P    ++E V      G LR   + F F
Sbjct:    2 ALRWGIVSAGLIANDFTTVLSSLPSSEHQVVAVAARDLNRAEEFAQKFNIP---KAYGSYEELAKDPNVEVAYIATQHPQHKPAVLLCLAAGKAVLCEKPMGVNAAEVREMVAKARSQGVFLMEAIWSRFFPAMEALRE-VLVQGTIGDLRVARAEFGF 156          
BLAST of DN135251 vs. ExPASy Swiss-Prot
Match: AFR_RHIME (1,5-anhydro-D-fructose reductase OS=Rhizobium meliloti GN=afr PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.147e-11
Identity = 41/114 (35.96%), Postives = 64/114 (56.14%), Query Frame = 3
Query:   84 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHVKWAIFVAQKKKHLLMEKPVALNVAE-FDVILKACE 422
            IR+G+IGA+ IAR+       A    + +V S S E+   +A  N     AK   S + L+ D D+DAVY+     +H   A+   +  KH+L EKP+A+N+ +  +++LKACE
Sbjct:    2 IRWGLIGASTIAREWVIGAIRAAGGEVVSVMSSSAERGEAYAAENGI---AKAVTSVDDLVGDPDVDAVYISTTNELHHGQALAAIRAGKHVLCEKPLAMNLNDGCEMVLKACE 112          
BLAST of DN135251 vs. ExPASy Swiss-Prot
Match: DHDH_PIG (Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase OS=Sus scrofa GN=DHDH PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.417e-11
Identity = 44/157 (28.03%), Postives = 74/157 (47.13%), Query Frame = 3
Query:   81 AIRFGIIGAADIARKLSRAITLAPNAV--LSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHVKWAIFVAQKKKHLLMEKPVALNVAEFDVILKACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCF 545
            A+R+GI+ A  I+   +  + L P +   + AVA+R L +A  FA+ ++ P   K YGSYE L  D +++  Y+      H    +      K +L EKP+ +N AE   ++      G+ LM+  +W       +    V   +  G LR + + F
Sbjct:    2 ALRWGIVSAGLISSDFTTVLRLLPRSEHQVVAVAARDLSRAKEFARKHDIP---KAYGSYEELAKDPNVEVAYIGTQHPQHKATVLLCLAAGKAVLCEKPMGVNAAEVREMVAEARSRGLFLME-AIWTRFFPAVEALRSVLAQETLGDLRVVQANF 154          
The following BLAST results are available for this feature:
BLAST of DN135251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
Y4967_ARATH2.476e-6470.06Uncharacterized oxidoreductase At4g09670 OS=Arabid... [more]
YMO1_RHIME7.058e-1935.90Uncharacterized oxidoreductase ORF334 OS=Rhizobium... [more]
DHDH_DANRE3.393e-1330.00Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase OS... [more]
DHDH_XENTR4.431e-1335.48Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase OS... [more]
DHDH_XENLA1.289e-1236.29Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase OS... [more]
YGJR_ECOLI8.357e-1237.19Uncharacterized oxidoreductase ygjR OS=Escherichia... [more]
YULF_BACSU2.431e-1131.62Uncharacterized oxidoreductase yulF OS=Bacillus su... [more]
DHDH_MOUSE3.175e-1130.19Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase OS... [more]
AFR_RHIME4.147e-1135.961,5-anhydro-D-fructose reductase OS=Rhizobium meli... [more]
DHDH_PIG5.417e-1128.03Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase OS... [more]
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Properties
Property NameValue
Genbank descriptionwca08f02 Mature Juice Sac from Navel Orange in Vulnus5 vector Citrus sinensis cDNA clone wca08f02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135251 ID=DN135251; Name=DN135251; organism=Citrus sinensis; type=EST; length=561bp
CGGCCGGGGAGTAAGCAGGTGCGCAGCCGGCCCCCACGATTACGATTGCG
CTTAGACAAATGGCGACAGAATCCCAAGCAGCAATCCGCTTCGGCATAAT
CGGCGCCGCGGACATAGCACGCAAGCTCTCACGCGCCATAACTCTGGCTC
CAAACGCCGTCCTATCAGCCGTCGCGAGCCGCTCTCTCGAGAAAGCCACT
AACTTCGCCAAAGCCAACAACTTCCCACCTGATGCCAAAGTCTACGGCTC
CTACGAGGCCTTGCTCGATGACAAGGATATCGACGCCGTCTACTTGCCGT
TACCGACGTCGATGCATGTCAAATGGGCCATCTTTGTCGCCCAAAAAAAG
AAGCATCTGTTGATGGAGAAGCCTGTGGCTTTGAACGTAGCGGAGTTTGA
TGTGATCTTGAAAGCTTGCGAGGAAAATGGGGTGCAGTTAATGGATGGTA
CCATGTGGGTGCATAATCCCAGGACGGCTCAAATGAAAGAGTTTGTTTCT
GATCCGCAGCGTTTTGGCCAGCTCAGAACGATGCACAGCTGCTTCTCATT
TGCTGGTGATG
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