DN135222

Overview
NameDN135222
Unique NameDN135222
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Mature Juice Sac from Navel Orange in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2614 contig Csv1_Contig2614:131..713. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135222 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.336e-23
Identity = 46/66 (69.70%), Postives = 54/66 (81.82%), Query Frame = 1
Query:   76 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVGTVVVMDVQAAETEGNCKCGPTCACVNCTCG 273
            MSDTCGNCDCAD++QCVKKGSSY AD +ET+ S +   VVMD  AAE +G CKCGP+C+C NCTCG
Sbjct:    1 MSDTCGNCDCADKTQCVKKGSSYTADIIETEKSIM--TVVMDAPAAENDGKCKCGPSCSCTNCTCG 64          
BLAST of DN135222 vs. ExPASy Swiss-Prot
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 9.904e-19
Identity = 39/64 (60.94%), Postives = 48/64 (75.00%), Query Frame = 1
Query:   85 TCGNCDCADRSQCVKKGSSYAADFVETDLSFVGTVVVMDVQAAETEGNCKCGPTCACVNCTCGS 276
            TCGNCDC D+SQCVKKG+SY  D VET+ S+V  V+V   +AAE +G CKCG  CAC +C CG+
Sbjct:    3 TCGNCDCVDKSQCVKKGNSYGIDIVETEKSYVDEVIVA-AEAAEHDGKCKCGAACACTDCKCGN 65          
BLAST of DN135222 vs. ExPASy Swiss-Prot
Match: MT3_ACTDE (Metallothionein-like protein type 3 OS=Actinidia deliciosa GN=pKIWI503 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.689e-18
Identity = 44/65 (67.69%), Postives = 49/65 (75.38%), Query Frame = 1
Query:   76 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVGTVVVMDVQAAETEGNCKCGPTCACVNCTC 270
            MSD CGNCDCAD SQCVKKG+S   D VETD S++  VV M V AAE+ G CKCG +C CVNCTC
Sbjct:    1 MSDKCGNCDCADSSQCVKKGNSI--DIVETDKSYIEDVV-MGVPAAESGGKCKCGTSCPCVNCTC 62          
BLAST of DN135222 vs. ExPASy Swiss-Prot
Match: MT3_PRUAV (Metallothionein-like protein 1 OS=Prunus avium GN=MT1 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.065e-16
Identity = 38/65 (58.46%), Postives = 45/65 (69.23%), Query Frame = 1
Query:   76 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVGTVVVMDVQAAETEGNCKCGPTCACVNCTC 270
            MS  C NCDC+D SQC KKG S+    VET+   + TV+ MD  AAE  GNCKCGP+CACV+C C
Sbjct:    1 MSSKCSNCDCSDSSQCTKKGYSFDLVIVETENRSMDTVI-MDAPAAENGGNCKCGPSCACVDCKC 64          
BLAST of DN135222 vs. ExPASy Swiss-Prot
Match: MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica GN=MT2 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.523e-16
Identity = 39/66 (59.09%), Postives = 46/66 (69.70%), Query Frame = 1
Query:   76 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVGTVVVMDVQAAETEGNCKCGPTCACVNCTCG 273
            MS  C NCDCAD +QCVKKG+SY    VET+   + TV V D  AAE +G CKCG  C+CV+CTCG
Sbjct:    1 MSGKCDNCDCADSTQCVKKGNSYDLVIVETENRSMDTVFV-DAPAAEHDGKCKCGTGCSCVSCTCG 65          
BLAST of DN135222 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSJ (Metallothionein-like protein 3A OS=Oryza sativa subsp. japonica GN=MT3A PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.748e-15
Identity = 36/66 (54.55%), Postives = 43/66 (65.15%), Query Frame = 1
Query:   76 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVGTVVVMDVQAAETEGNCKCGPTCACVNCTCG 273
            MSD CGNCDCAD+SQCVKKG+SY    VE + S        +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSH-----FEEVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of DN135222 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSI (Metallothionein-like protein 3A OS=Oryza sativa subsp. indica GN=MT3A PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.748e-15
Identity = 36/66 (54.55%), Postives = 43/66 (65.15%), Query Frame = 1
Query:   76 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVGTVVVMDVQAAETEGNCKCGPTCACVNCTCG 273
            MSD CGNCDCAD+SQCVKKG+SY    VE + S        +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSH-----FEEVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of DN135222 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSJ (Metallothionein-like protein 3B OS=Oryza sativa subsp. japonica GN=MT3B PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.636e-13
Identity = 33/66 (50.00%), Postives = 41/66 (62.12%), Query Frame = 1
Query:   76 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVGTVVVMDVQAAETEGNCKCGPTCACVNCTCG 273
            MSD CGNCDCAD+SQCVKKG+SY    V+ + S     +  +V   E +G CKC   C+C  C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVDAEKSHF--EMAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
BLAST of DN135222 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSI (Metallothionein-like protein 3B OS=Oryza sativa subsp. indica GN=MT3B PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.218e-13
Identity = 32/66 (48.48%), Postives = 41/66 (62.12%), Query Frame = 1
Query:   76 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVGTVVVMDVQAAETEGNCKCGPTCACVNCTCG 273
            MSD CG+CDCAD+SQCVKKG+SY    V+ + S     +  +V   E +G CKC   C+C  C CG
Sbjct:    1 MSDKCGHCDCADKSQCVKKGTSYGVVIVDAEKSHF--EMAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
The following BLAST results are available for this feature:
BLAST of DN135222 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
MT3_CARPA1.336e-2369.70Metallothionein-like protein type 3 OS=Carica papa... [more]
MT3_MUSAC9.904e-1960.94Metallothionein-like protein type 3 OS=Musa acumin... [more]
MT3_ACTDE1.689e-1867.69Metallothionein-like protein type 3 OS=Actinidia d... [more]
MT3_PRUAV2.065e-1658.46Metallothionein-like protein 1 OS=Prunus avium GN=... [more]
MT3_MALDO3.523e-1659.09Metallothionein-like protein type 3 OS=Malus domes... [more]
MT3A_ORYSJ1.748e-1554.55Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3A_ORYSI1.748e-1554.55Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3B_ORYSJ1.636e-1350.00Metallothionein-like protein 3B OS=Oryza sativa su... [more]
MT3B_ORYSI6.218e-1348.48Metallothionein-like protein 3B OS=Oryza sativa su... [more]
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Properties
Property NameValue
Genbank descriptionwca08b03 Mature Juice Sac from Navel Orange in Vulnus5 vector Citrus sinensis cDNA clone wca08b03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135222 ID=DN135222|Name=DN135222|organism=Citrus sinensis|type=EST|length=581bp
CAAAGCAAAGCAAGTTTCGTAAATAAAGAGCCCTCTATTTCCAGTTTTAA
ATTCCAAGTTCTAAGCTCAATCAACATGTCGGACACCTGCGGCAACTGCG
ACTGCGCTGACAGGAGCCAGTGTGTGAAGAAGGGAAGCAGCTATGCTGCT
GACTTCGTCGAGACTGACTTGAGCTTTGTCGGCACCGTTGTTGTCATGGA
CGTTCAGGCTGCTGAGACTGAAGGTAACTGCAAGTGCGGCCCCACCTGCG
CTTGTGTGAACTGCACTTGTGGTAGTCACTAATAAGCAAACTCATGCAGC
AAAAAATAAGAAGCTGCAAGTGTGCCTAAATATTGTGGGGGTTAAGAATA
ACGTAAGGGTGATTAAAAAAAAAGAAAAATTCTCTACTTCGTTTTTATGA
TGGTCTACTACTAGTGTGTGGAGTGATGTGCGTGTTGTGTCACCCATCAC
TCGTAATGTTTTGTGTTTCCTTCTTCATAATCATGTAATATATGGCCATG
GCCATGACCGTGGCCTTGTGTGGTTTAATTTTAATGTATTATTGTTAGTC
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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