DN135184

Overview
NameDN135184
Unique NameDN135184
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length627
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2568 contig Csv1_Contig2568:133..759. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135184 vs. ExPASy Swiss-Prot
Match: LEA5_CITSI (Late embryogenesis abundant protein Lea5 OS=Citrus sinensis GN=LEA5 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.827e-48
Identity = 96/97 (98.97%), Postives = 97/97 (100.00%), Query Frame = 3
Query:  156 MARSLFKAKLLLAPVADGISLSISRRGYAAAAPLGTISRTGIMEKNDMRPAVREDSGASSAWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRAH 446
            MARSLFKAKLLLAPVADGISLSISRRGYAAAAPLGTISRTGIMEKND+RPAVREDSGASSAWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRAH
Sbjct:    1 MARSLFKAKLLLAPVADGISLSISRRGYAAAAPLGTISRTGIMEKNDLRPAVREDSGASSAWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRAH 97          
BLAST of DN135184 vs. ExPASy Swiss-Prot
Match: LEA5D_GOSHI (Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum GN=LEA5-D PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.318e-22
Identity = 58/104 (55.77%), Postives = 71/104 (68.27%), Query Frame = 3
Query:  156 MARSLFKAKLLLAPVADGISLSISRRGYAAAAPLG---TISRTGIMEKNDMRPAVREDSGA-----SSAWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRA 443
            MARS+   KLL A + DG+ +SISRRGY+ A P     +  R G M K + R A++E S +     SSAWAPDP+TGYYRPEN   EID AELREMLLNH+VR+
Sbjct:    1 MARSVSSFKLLGASIFDGLYVSISRRGYSGAPPAAVTASFGRPGAMGKVERRDAMKESSSSETRAYSSAWAPDPVTGYYRPENCGAEIDAAELREMLLNHRVRS 104          
BLAST of DN135184 vs. ExPASy Swiss-Prot
Match: LEA5A_GOSHI (Late embryogenesis abundant protein Lea5-A OS=Gossypium hirsutum GN=LEA5-A PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 9.446e-21
Identity = 55/104 (52.88%), Postives = 69/104 (66.35%), Query Frame = 3
Query:  156 MARSLFKAKLLLAPVADGISLSISRRGYAAAAPLG---TISRTGIMEKNDMRPAVREDSGA-----SSAWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRA 443
            MARS+   K L A V D + +SISRRGY+ A P     +  R G M K + R A++E S +     SSAWAPDP+TGYYRPEN   EID A+LREM+LNH+VR+
Sbjct:    1 MARSVSSFKFLGASVFDALYVSISRRGYSGAPPAAVTASFGRPGAMGKVERRYAMKESSSSETRAYSSAWAPDPVTGYYRPENCGAEIDAADLREMMLNHRVRS 104          
BLAST of DN135184 vs. ExPASy Swiss-Prot
Match: ARG2_PHAAU (Indole-3-acetic acid-induced protein ARG2 OS=Phaseolus aureus GN=ARG2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.046e-11
Identity = 43/97 (44.33%), Postives = 56/97 (57.73%), Query Frame = 3
Query:  156 MARSLFKAKLLLAPVADGISLSISRRGYAAAAPLG-TISRTGIMEKNDMRPAVREDS---GASSAWAPDPITGYYRPENRAVEIDPAELREMLLNHK 434
            MARS    K+L A VADG S + +R G+AAAA    + +R G     +M P   E+    G   +W PDP+TGYYRPEN   EID A++R  +L  K
Sbjct:    1 MARSFTNVKVLSALVADGFSNTTTRHGFAAAAAATQSATRGGASIGGNMVPKSGEEKVRGGEKVSWVPDPVTGYYRPEN-TNEIDVADMRATVLGKK 96          
The following BLAST results are available for this feature:
BLAST of DN135184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
LEA5_CITSI1.827e-4898.97Late embryogenesis abundant protein Lea5 OS=Citrus... [more]
LEA5D_GOSHI1.318e-2255.77Late embryogenesis abundant protein Lea5-D OS=Goss... [more]
LEA5A_GOSHI9.446e-2152.88Late embryogenesis abundant protein Lea5-A OS=Goss... [more]
ARG2_PHAAU3.046e-1144.33Indole-3-acetic acid-induced protein ARG2 OS=Phase... [more]
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Properties
Property NameValue
Genbank descriptionwca07e03 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca07e03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135184 ID=DN135184; Name=DN135184; organism=Citrus sinensis; type=EST; length=627bp
GGGGCCTCACAAGCANNNNACAAAGAGAGCGAGCCGCTAGCTTTTGCCTA
TAGCTACTGCAGGAGCAGAATCTTTCTTCTTCTGTAGTAGCACTGTACAG
AAACATCCCAGCTAGCTATCTTCATATCTATTAAGTTCTATAGGTAAATA
AAACAATGGCCCGCTCTCTCTTCAAAGCTAAGCTTCTTCTTGCTCCTGTT
GCTGATGGCATCTCGCTCTCCATTAGCAGGAGAGGATATGCTGCAGCAGC
ACCCTTGGGGACCATATCTCGGACTGGTATCATGGAGAAAAATGATATGA
GGCCTGCGGTGAGAGAGGATTCTGGGGCCTCTTCTGCCTGGGCCCCAGAT
CCCATCACTGGGTACTACAGGCCGGAGAATCGGGCGGTCGAGATTGATCC
AGCAGAGCTTCGAGAGATGCTGTTGAACCACAAAGTCAGGGCACACTAGG
GAGTGGTGGCGCATAGCAGCAGATCCTTTGCTGTTAGCGGTGCTTTAACT
TTTTAAGTGATGTTGTTACAGTAGCAATTTTGACTCACTCTTAAGTCTTT
GCTGTTGTATTGATATCAACTGTTATTGACAACTTTTAATAGTGCATTTC
CATGATTTTGTCTATTAACTTGTCAAT
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