DN135174

Overview
NameDN135174
Unique NameDN135174
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length622
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DN135174 vs. ExPASy Swiss-Prot
Match: Y3684_ARATH (Acyltransferase-like protein At3g26840, chloroplastic OS=Arabidopsis thaliana GN=At3g26840 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.785e-17
Identity = 41/69 (59.42%), Postives = 54/69 (78.26%), Query Frame = 3 
Query:   12 KPIETEXXXXXLRDREKCHEL*IEVKSEVEKCIAYLKEKRETDPYRNLLARLTYQATHGPTNEVPTFQI 218
            KPIET      L+D+EK  EL ++VKSEVE+CI YLK KRE+DPYR+LL R+ YQA+HG ++E+PTF +
Sbjct:  633 KPIETAGKEKELKDKEKAQELYLQVKSEVEQCIDYLKVKRESDPYRHLLPRMLYQASHGWSSEIPTFDL 701
[Close]
BLAST of DN135174 vs. ExPASy Swiss-Prot
Match: Y1457_ARATH (Acyltransferase-like protein At1g54570, chloroplastic OS=Arabidopsis thaliana GN=At1g54570 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.697e-12
Identity = 33/68 (48.53%), Postives = 48/68 (70.59%), Query Frame = 3 
Query:   12 KPIETEXXXXXLRDREKCHEL*IEVKSEVEKCIAYLKEKRETDPYRNLLARLTYQATHGPTNEVPTFQ 215
            KPIET+     ++D+E+ +++ +EVK+EVE  IAYL +KRE DPYR++L RL Y  TH     VP+F+
Sbjct:  636 KPIETKGRPELVKDKEEANQVYLEVKAEVENSIAYLLKKREEDPYRSVLDRLNYSLTHTTATHVPSFE 703
The following BLAST results are available for this feature:
BLAST of DN135174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
Y3684_ARATH2.785e-1759.42Acyltransferase-like protein At3g26840, chloroplas... [more]
Y1457_ARATH2.697e-1248.53Acyltransferase-like protein At1g54570, chloroplas... [more]
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Properties
Property NameValue
Genbank descriptionwca07c12 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca07c12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135174 ID=DN135174; Name=DN135174; organism=Citrus sinensis; type=EST; length=622bp
GCGCGGGGGTGAAACCAATTGAAACAGAAGNNNNNNAACANNNATTAAGA
GACAGGGAGAAATGTCATGAGTTGTAAATAGAAGTAAAGTCTGAGGTTGA
AAAGTGCATTGCTTATTTAAAGGAGAAGAGAGAAACCGATCCGTACAGAA
ATCTATTGGCTCGACTTACTTACCAGGCTACGCATGGCCCTACAAATGAA
GTCCCGACTTTTCAAATCTGAGCATTGATTCTTTGTAATCTCTGAGAAGA
TCTGCAAGAGCTTCAGGAAATAAAGGTAGCATCAGTTCATGGAAAAAAAG
TAGTTGATACTTTAGACAAACAGTTCAAGATTGTTGATTCTTGATTAGAT
AGTAGAATTTGTTTGAAGAAAAGAACAAGAAAAACGTAGATAGATCACAC
GTTTGTTAATACTGCACATAGGGTCTTGTAATAGACATTCATAGCCGTTC
AAGACGGAAGAATAGTGTCTGTTCTCTGTAGATTAATTACAACACTATTT
TTTCAGTGAAATGGAGTAAAAGTACTATTGTATTTGGTACATGTGGTGAT
CAGCTTGGGGACGAGTCTTCCCTGGTCACGACGGTATGTATTTTGCAAAT
ATTAATATTTTATTGATATATT
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