DN135171

Overview
NameDN135171
Unique NameDN135171
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11184 contig Csv1_Contig11184:12..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135171 vs. ExPASy Swiss-Prot
Match: TMM85_XENLA (Transmembrane protein 85 OS=Xenopus laevis GN=tmem85 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.470e-17
Identity = 56/180 (31.11%), Postives = 88/180 (48.89%), Query Frame = 2
Query:   35 VMGSGRR--WAVDFTDNSTTP-----STRDIADPPGFSRASQDQDDSTLSRQKKDAEANWKSQKAWEVAQAPFKNLXXXXXXXXXAGSTVHLFSIGITFSALWQPISALQGAGKVFEPYKDSKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPL 553
            V   GRR  WA++F    +         +D   P G+S      D        ++++     ++ W++A  P K +         AG+T+ +F I +     W+PI AL      F+  + S    L   L+++  NL GLALGV+K  ++GLLPTHASDW++ + P   +EY+GGG  L
Sbjct:    8 VTNRGRRFKWAIEFGSGGSRGRGERGGLQDSMYPVGYS------DKQVPDTSVQESDHILVEKRCWDIALGPLKQIPMNLFIMYMAGNTISIFPIMMVCMMAWRPIQALLATPATFKLLESSGQRFL-QGLVYLIGNLLGLALGVYKCQSMGLLPTHASDWLAFIEPPERMEYTGGGFLL 180          
BLAST of DN135171 vs. ExPASy Swiss-Prot
Match: TMM85_XENTR (Transmembrane protein 85 OS=Xenopus tropicalis GN=tmem85 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.301e-16
Identity = 55/180 (30.56%), Postives = 88/180 (48.89%), Query Frame = 2
Query:   35 VMGSGRR--WAVDFTDNSTTP-----STRDIADPPGFSRASQDQDDSTLSRQKKDAEANWKSQKAWEVAQAPFKNLXXXXXXXXXAGSTVHLFSIGITFSALWQPISALQGAGKVFEPYKDSKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPL 553
            V   GRR  WA++F    +         +D   P G+S      D        ++++     ++ W++A  P K +         AG+T+ +F I +     W+PI AL      F+  + S    L   L+++  NL GLAL V+K  ++GLLPTHASDW++ + P   +EY+GGG+ L
Sbjct:    8 VANRGRRFKWAIEFGSGGSRGRGERGGLQDSMYPVGYS------DKQVPDTSVQESDHILVEKRCWDIALGPLKQIPMNLFIMYMAGNTISIFPIMMVCMMAWRPIQALLATPATFKLLESSGQRFL-QGLVYLIGNLLGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEYTGGGLLL 180          
BLAST of DN135171 vs. ExPASy Swiss-Prot
Match: TMM85_DANRE (Transmembrane protein 85 OS=Danio rerio GN=tmem85 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.699e-16
Identity = 52/171 (30.41%), Postives = 86/171 (50.29%), Query Frame = 2
Query:   53 RWAVDFT-DNSTTPSTR-----DIADPPGFSRASQDQDDSTLSRQKKDAEANWKSQKAWEVAQAPFKNLXXXXXXXXXAGSTVHLFSIGITFSALWQPISALQGAGKVFEPYKDSKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGI 547
            +WAV+ +  NS + S R     D+  P G+S      D        ++A+ N   ++ W+VA  P K +         +G+T+ +F I +     W+PI AL      F+  + S    L   L+++  NL G AL ++K  ++GLLPTH+SDW++ + P   +E  GGG+
Sbjct:   24 KWAVELSLGNSRSRSDRQGKDGDVMYPVGYS------DKPVPDTSVQEADRNLVEKRCWDVALGPLKQIPMNLFIMYMSGNTISIFPIMMVCMMAWRPIQALMSMSATFKLLESSSQQWL-QGLVYLIGNLLGSALAIYKCQSMGLLPTHSSDWLAFIEPPQRLEIMGGGM 187          
BLAST of DN135171 vs. ExPASy Swiss-Prot
Match: TMM85_BOVIN (Transmembrane protein 85 OS=Bos taurus GN=TMEM85 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.699e-16
Identity = 60/193 (31.09%), Postives = 90/193 (46.63%), Query Frame = 2
Query:   23 KGKGVMGSGRR--WAVDFTDNSTTPSTRDIADPPGFSRASQD----QDDST-----LSRQKKDAEANWKSQ-----KAWEVAQAPFKNLXXXXXXXXXAGSTVHLFSIGITFSALWQPISALQGAGKVFEPYKDSKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPL 553
            +G  V   GRR  WA++            ++ P G SR   D    Q DS      L +Q  D       +     + W++A  P K +         AG+T+ +F   +     W+PI AL      F+  + S    L   L+++  NL GLAL V+K  ++GLLPTHASDW++ + P   +E+SGGG+ L
Sbjct:    4 QGSLVANRGRRFKWAIE------------LSGPGGGSRGRSDRGGGQGDSLYPVGYLDKQVPDTSVQETDRILVEKRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLESSSQKFL-QGLVYLIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEFSGGGLLL 183          
BLAST of DN135171 vs. ExPASy Swiss-Prot
Match: TMM85_PONAB (Transmembrane protein 85 OS=Pongo abelii GN=TMEM85 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.897e-16
Identity = 60/193 (31.09%), Postives = 90/193 (46.63%), Query Frame = 2
Query:   23 KGKGVMGSGRR--WAVDFTDNSTTPSTRDIADPPGFSRASQD----QDDST-----LSRQKKDAEANWKSQ-----KAWEVAQAPFKNLXXXXXXXXXAGSTVHLFSIGITFSALWQPISALQGAGKVFEPYKDSKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPL 553
            +G  V   GRR  WA++            ++ P G SR   D    Q DS      L +Q  D       +     + W++A  P K +         AG+T+ +F   +     W+PI AL      F+  + S    L   L+++  NL GLAL V+K  ++GLLPTHASDW++ + P   +E+SGGG+ L
Sbjct:    4 QGGLVANRGRRFKWAIE------------LSGPGGGSRGRSDRGSGQGDSLYPVGYLDKQVPDTSVQETDRILVEKRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLESSSQKFL-QGLVYLIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEFSGGGLLL 183          
BLAST of DN135171 vs. ExPASy Swiss-Prot
Match: TMM85_MOUSE (Transmembrane protein 85 OS=Mus musculus GN=Tmem85 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.897e-16
Identity = 60/193 (31.09%), Postives = 90/193 (46.63%), Query Frame = 2
Query:   23 KGKGVMGSGRR--WAVDFTDNSTTPSTRDIADPPGFSRASQD----QDDST-----LSRQKKDAEANWKSQ-----KAWEVAQAPFKNLXXXXXXXXXAGSTVHLFSIGITFSALWQPISALQGAGKVFEPYKDSKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPL 553
            +G  V   GRR  WA++            ++ P G SR   D    Q DS      L +Q  D       +     + W++A  P K +         AG+T+ +F   +     W+PI AL      F+  + S    L   L+++  NL GLAL V+K  ++GLLPTHASDW++ + P   +E+SGGG+ L
Sbjct:    4 QGGLVANRGRRFKWAIE------------LSGPGGGSRGRSDRGSGQGDSLYPVGYLDKQVPDTSVQETDRILVEKRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLESSSQKFL-QGLVYLIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEFSGGGLLL 183          
BLAST of DN135171 vs. ExPASy Swiss-Prot
Match: TMM85_HUMAN (Transmembrane protein 85 OS=Homo sapiens GN=TMEM85 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.897e-16
Identity = 60/193 (31.09%), Postives = 90/193 (46.63%), Query Frame = 2
Query:   23 KGKGVMGSGRR--WAVDFTDNSTTPSTRDIADPPGFSRASQD----QDDST-----LSRQKKDAEANWKSQ-----KAWEVAQAPFKNLXXXXXXXXXAGSTVHLFSIGITFSALWQPISALQGAGKVFEPYKDSKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPL 553
            +G  V   GRR  WA++            ++ P G SR   D    Q DS      L +Q  D       +     + W++A  P K +         AG+T+ +F   +     W+PI AL      F+  + S    L   L+++  NL GLAL V+K  ++GLLPTHASDW++ + P   +E+SGGG+ L
Sbjct:    4 QGGLVANRGRRFKWAIE------------LSGPGGGSRGRSDRGSGQGDSLYPVGYLDKQVPDTSVQETDRILVEKRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLESSSQKFL-QGLVYLIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEFSGGGLLL 183          
BLAST of DN135171 vs. ExPASy Swiss-Prot
Match: TMM85_SALSA (Transmembrane protein 85 OS=Salmo salar GN=tmem85 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.590e-14
Identity = 45/151 (29.80%), Postives = 75/151 (49.67%), Query Frame = 2
Query:  101 DIADPPGFSRASQDQDDSTLSRQKKDAEANWKSQKAWEVAQAPFKNLXXXXXXXXXAGSTVHLFSIGITFSALWQPISALQGAGKVFEPYKDSKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPL 553
            D+  P G+S      D        ++ + N   ++ W+VA  P K +         +G+T+ +F I +     W+PI AL      F+  ++S    L   L++   NL G AL ++K  ++GLLPTH+SDW++ + P   +E  GGG+ L
Sbjct:   45 DVMYPIGYS------DKPVPDTSIQETDKNLVEKRCWDVALGPLKQIPMNLFIMYMSGNTISIFPIMMVCMMAWRPIQALMSMSATFKLLENSNQQWL-QGLVYSVGNLLGSALAIYKCQSMGLLPTHSSDWLAFIEPPQRMEIMGGGMVL 188          
BLAST of DN135171 vs. ExPASy Swiss-Prot
Match: YQ13_SCHPO (Uncharacterized membrane protein C1281.03c OS=Schizosaccharomyces pombe GN=SPCC1281.03c PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.315e-12
Identity = 36/118 (30.51%), Postives = 65/118 (55.08%), Query Frame = 2
Query:  152 STLSRQKKDAEANWKSQKAWEVAQAPFKNLXXXXXXXXXAGSTVHLFSIGITFSALWQPISALQGAGKVFEPYKDSKVDLLGPKL-LFIALNLGGLALGVWKLNTLGLLPTHASDWVS 502
            S  ++++++ + +   +KAWE+A +P K +         +G+++ +FSI  T   L  P+ A+   G  F P+K +    L P +  +I   L  + +GV+KL  +GLLPT  SDW++
Sbjct:   57 SIFAKREEELQKDLLLKKAWELAYSPLKQIPMNAILAYMSGNSLQIFSIMTTLMLLVNPLKAITSTGSAFTPFKGTHPGTLWPAMGAYILFQLLLMGIGVYKLQRMGLLPTTTSDWLA 174          
The following BLAST results are available for this feature:
BLAST of DN135171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
TMM85_XENLA4.470e-1731.11Transmembrane protein 85 OS=Xenopus laevis GN=tmem... [more]
TMM85_XENTR1.301e-1630.56Transmembrane protein 85 OS=Xenopus tropicalis GN=... [more]
TMM85_DANRE1.699e-1630.41Transmembrane protein 85 OS=Danio rerio GN=tmem85 ... [more]
TMM85_BOVIN1.699e-1631.09Transmembrane protein 85 OS=Bos taurus GN=TMEM85 P... [more]
TMM85_PONAB2.897e-1631.09Transmembrane protein 85 OS=Pongo abelii GN=TMEM85... [more]
TMM85_MOUSE2.897e-1631.09Transmembrane protein 85 OS=Mus musculus GN=Tmem85... [more]
TMM85_HUMAN2.897e-1631.09Transmembrane protein 85 OS=Homo sapiens GN=TMEM85... [more]
TMM85_SALSA1.590e-1429.80Transmembrane protein 85 OS=Salmo salar GN=tmem85 ... [more]
YQ13_SCHPO3.315e-1230.51Uncharacterized membrane protein C1281.03c OS=Schi... [more]
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Properties
Property NameValue
Genbank descriptionwca07c07 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca07c07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135171 ID=DN135171; Name=DN135171; organism=Citrus sinensis; type=EST; length=688bp
GGGGAATCCANNNAAAATGGAAAAAGGCAAAGGAGTGATGGGTTCCGGGC
GAAGATGGGCTGTTGATTTCACCGACAATTCAACGACTCCTTCCACTCGC
GACATCGCTGACCCTCCGGGCTTCTCTCGGGCTTCTCAAGATCAGGATGA
TTCAACGCTAAGTCGTCAAAAGAAAGATGCCGAAGCCAATTGGAAATCTC
AGAAAGCTTGGGAAGTGGCACAAGCCCCTTTCAAGAATCTGATGATGATG
GGCTTTATGATGTGGATGGCGGGAAGTACTGTGCATCTGTTTAGCATTGG
TATTACTTTTTCAGCTCTCTGGCAGCCTATAAGTGCTCTACAAGGGGCTG
GAAAGGTTTTTGAGCCTTACAAGGACAGTAAAGTAGATCTTCTGGGACCC
AAGTTGCTGTTCATTGCCCTTAACTTGGGAGGCTTAGCACTGGGTGTTTG
GAAGCTTAACACATTGGGGCTTCTTCCGACACATGCATCGGATTGGGTTT
CATCCTTACCCCCCGCTCTGGAGGTCGAATATTCGGGTGGTGGCATTCCT
CTGCAGTAAGGAAGTATCAGTGCTTGTTCACTTCAGTTTGTGATCATTTG
CCAAGTATTGAAGTGAAAGGAAGTTGCAACTTGCAAGAGCTTGTCTGTCT
ATCTGGGGAGNNNTTCTTGGTCGATGGCTTGTTATTGA
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