DN135143

Overview
NameDN135143
Unique NameDN135143
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length671
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2009 contig Csv1_Contig2009:1..666. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135143 vs. ExPASy Swiss-Prot
Match: HSP21_SOYBN (17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 6.689e-55
Identity = 110/160 (68.75%), Postives = 124/160 (77.50%), Query Frame = 2
Query:   89 MDFRIMGLDSSPLFSTLQHMMEMGADDSADNKSFNAPTRTYVRDAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVRVEDDNVLLISXXXXXXXXXXXAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDXXXXXXXXXXXTIEVKIA 568
            MDFR+MGL+S PLF TLQHMM+M  D + DNK+ NAPT +YVRDAKAMA TPADVKEYPNSYVF +DMPGLKSGDIKV+VEDDN+LLI            AKY+RMERRVGK MRKFVLPENAN +AISAVCQDGVL+VTV            TI+VK+A
Sbjct:    1 MDFRVMGLES-PLFHTLQHMMDMSEDGAGDNKTHNAPTWSYVRDAKAMAATPADVKEYPNSYVFEIDMPGLKSGDIKVQVEDDNLLLICGERKRDEEKEGAKYLRMERRVGKLMRKFVLPENANTDAISAVCQDGVLSVTVQKLPPPEPKKPRTIQVKVA 159          
BLAST of DN135143 vs. ExPASy Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 6.261e-53
Identity = 106/160 (66.25%), Postives = 121/160 (75.62%), Query Frame = 2
Query:   89 MDFRIMGLDSSPLFSTLQHMMEMGADDSADNKSFNAPTRTYVRDAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVRVEDDNVLLISXXXXXXXXXXXAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDXXXXXXXXXXXTIEVKIA 568
            MD R++G+D++PLF TL HMME   +DS      NAP++ YVRDAKAMA TPADVKEYPNSYVF+VDMPGLKSGDIKV+VE+DNVLLIS           AK++RMERRVGKFMRKF LPENAN +AISAVCQDGVLTVTV            TIEVK+A
Sbjct:    1 MDLRLLGIDNTPLFHTLHHMMEAAGEDSV-----NAPSKIYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKFIRMERRVGKFMRKFSLPENANTDAISAVCQDGVLTVTVQKLPPPEPKKPKTIEVKVA 155          
BLAST of DN135143 vs. ExPASy Swiss-Prot
Match: HSP21_PEA (17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.555e-48
Identity = 100/155 (64.52%), Postives = 118/155 (76.13%), Query Frame = 2
Query:  104 MGLDSSPLFSTLQHMMEMGADDSADNKSFNAPTRTYVRDAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVRVEDDNVLLISXXXXXXXXXXXAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDXXXXXXXXXXXTIEVKIA 568
            M LDS PLF+TL H+M++   D    K+ NAPTRTYVRDAKAMA TPADVKE+PNSYVF+VDMPG+KSGDIKV+VED+NVLLIS            KY++MERR+GK MRKFVLPENAN+EAISA+ QDGVLTVTV+           TI+VK+A
Sbjct:    1 MDLDS-PLFNTLHHIMDL--TDDTTEKNLNAPTRTYVRDAKAMAATPADVKEHPNSYVFMVDMPGVKSGDIKVQVEDENVLLISGERKREEEKEGVKYLKMERRIGKLMRKFVLPENANIEAISAISQDGVLTVTVNKLPPPEPKKPKTIQVKVA 152          
BLAST of DN135143 vs. ExPASy Swiss-Prot
Match: HSP21_IPONI (17.2 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-1 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.679e-45
Identity = 102/160 (63.75%), Postives = 114/160 (71.25%), Query Frame = 2
Query:   89 MDFRIMGLDSSPLFSTLQHMMEMGADDSADNKSFNAPTRTYVRDAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVRVEDDNVLLIS-XXXXXXXXXXXAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDXXXXXXXXXXXTIEVKI 565
            MD R+MG D  PLF    H+M+   DD + N S  AP+RT++ DAKAMA TPADVKEYPNSYVFI+DMPGLKSGDIKV+V+ DNVL IS            AKYVRMERRVGK MRKFVLPENAN E I+AVCQDGVLTVTV+           TIEVKI
Sbjct:    1 MDLRLMGFDH-PLF---HHIMDYAGDDKSSNSS--APSRTFMLDAKAMAATPADVKEYPNSYVFIIDMPGLKSGDIKVQVDGDNVLSISGERKREAEEKEGAKYVRMERRVGKLMRKFVLPENANKEKITAVCQDGVLTVTVENVPPPEPKKPRTIEVKI 154          
BLAST of DN135143 vs. ExPASy Swiss-Prot
Match: HSP21_HELAN (17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.637e-43
Identity = 93/157 (59.24%), Postives = 113/157 (71.97%), Query Frame = 2
Query:  101 IMGLDSSPLFSTLQHMMEMGADDSADNKSFNA-PTRTYVRDAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVRVEDDNVLLISXXXXXXXXXXXAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDXXXXXXXXXXXTIEVKIA 568
            +MG D  PL   L +++E   D++  NKS N+ P+R YVRDA+AMA TPADVKE PNSYVFIVDMPGLKSGDIKV+VE DNVL+IS            KYVRMERR+GKFM+KF LPE+AN + ISA+CQDGVLTVTV+           TI+V++A
Sbjct:    6 LMGFD--PLLRNLHYILEATDDNTTGNKSNNSGPSRAYVRDARAMAATPADVKECPNSYVFIVDMPGLKSGDIKVQVERDNVLVISGKRNREEEKEGVKYVRMERRMGKFMKKFALPEDANTDKISAICQDGVLTVTVEKLPPPEPKKPKTIQVQVA 160          
BLAST of DN135143 vs. ExPASy Swiss-Prot
Match: HSP22_IPONI (18.8 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-2 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.889e-41
Identity = 96/167 (57.49%), Postives = 111/167 (66.47%), Query Frame = 2
Query:   89 MDFRIMGLDS----SPLFSTLQHMMEMGAD-DSADNKSFNAPTRTYVRDAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVRVEDDNVLLIS--XXXXXXXXXXXAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDXXXXXXXXXXXTIEVKIA 568
            MD R  GL +      L ST+Q M++   D D A       P R YVRDAKAMA TPADVKEYPNSYVFI DMPG+K+ +IKV+VEDDNVL++S              KY+RMERRVGKFMRKFVLPENANVEAI+AV QDGVL VTV+           T+EVK+A
Sbjct:    1 MDLRNFGLSNFGLEPQLLSTIQDMLDFADDHDRAGRAPPEQPIRAYVRDAKAMAATPADVKEYPNSYVFIADMPGVKAAEIKVQVEDDNVLVVSGERTEREKDEKDGVKYLRMERRVGKFMRKFVLPENANVEAINAVYQDGVLQVTVEKLPPPEPKKPKTVEVKVA 167          
BLAST of DN135143 vs. ExPASy Swiss-Prot
Match: HSP22_MAIZE (17.8 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.497e-41
Identity = 89/165 (53.94%), Postives = 118/165 (71.52%), Query Frame = 2
Query:   89 MDFRIMGLDSSPLFSTLQHMMEMGADDSA---DNK--SFNAPTRTYVRDAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVRVEDDNVLLISXXXXXXXXXXXAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDXXXXXXXXXXXTIEVKIA 568
            MD  + GL++ PL + LQH++++   D+    DNK  S  + TRTYVRDA+AMA TPADVKE P +Y F+VDMPGL +GDI+V+VED+ VL++S           AKY+RMERR+GKFMRKFVLP+NA+V+ ++AVC+DGVLTVTV+           TIEVK+A
Sbjct:    1 MDAVMFGLET-PLMAALQHLLDVPDGDAGAGGDNKTGSGGSATRTYVRDARAMAATPADVKELPGAYAFVVDMPGLGTGDIRVQVEDERVLVVSGERRREEREDDAKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVTVEKLPPPEPKKPKTIEVKVA 164          
BLAST of DN135143 vs. ExPASy Swiss-Prot
Match: HSP21_MAIZE (17.5 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.563e-40
Identity = 90/163 (55.21%), Postives = 114/163 (69.94%), Query Frame = 2
Query:   89 MDFRIMGLDSSPLFSTLQHMMEMGADDSA---DNKSFNAPTRTYVRDAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVRVEDDNVLLISXXXXXXXXXXXAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDXXXXXXXXXXXTIEVKIA 568
            MD R+ GL++ PL   LQH++++   D+    D      PTRTYV DA+AMA TPADVKE P +Y F+VDMPGL +GDIKV+VED+ VL+IS           AKY+RMERR+GKFMRKFVLP+NA+++ ISAVC+DGVLTVTV+           TIEVK+A
Sbjct:    1 MDGRMFGLET-PLMVALQHLLDVPDGDAGAGGDKAGGGGPTRTYVADARAMAVTPADVKELPGAYAFVVDMPGLGTGDIKVQVEDERVLVIS-GERRREEREDAKYLRMERRMGKFMRKFVLPDNADMDKISAVCRDGVLTVTVEKLPPPEPKKPKTIEVKVA 161          
BLAST of DN135143 vs. ExPASy Swiss-Prot
Match: HSP18_ORYSJ (18.0 kDa class II heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.0 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.335e-38
Identity = 87/167 (52.10%), Postives = 115/167 (68.86%), Query Frame = 2
Query:   89 MDFRIMGLDSSPLFSTLQHMMEM--GADDSADNK-SFNAPTRTYVRDAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVRVEDDNVLLIS----XXXXXXXXXXXAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDXXXXXXXXXXXTIEVKIA 568
            M+  + GL++ PL + LQH++++  G   +A  + +   PTR YVRDA+AMA TPADVK+ P +Y F+VDMPGLKS DIKV+VE++ +L+IS                KY+RMERR+GKFMRKFVLP+NA+V+ ISAVCQDGVLTVTV+           TIEVK+A
Sbjct:    1 MESAMFGLET-PLMTALQHLLDIPDGEGGAAGKQGATGGPTRAYVRDARAMAATPADVKDLPGAYAFVVDMPGLKSSDIKVQVEEERLLVISGERRRGGGEEEKEESCKYLRMERRMGKFMRKFVLPDNADVDKISAVCQDGVLTVTVEKLPPPEPKKPKTIEVKVA 166          
BLAST of DN135143 vs. ExPASy Swiss-Prot
Match: HSP23_MAIZE (17.0 kDa class II heat shock protein OS=Zea mays GN=HSP18 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 5.689e-38
Identity = 84/160 (52.50%), Postives = 112/160 (70.00%), Query Frame = 2
Query:   89 MDFRIMGLDSSPLFSTLQHMMEMGADDSADNKSFNAPTRTYVRDAKAMAGTPADVKEYPNSYVFIVDMPGLKSGDIKVRVEDDNVLLISXXXXXXXXXXXAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTVDXXXXXXXXXXXTIEVKIA 568
            MD R+ GL++ P  + L H++++   D A   +    TRTYVRDA+AMA TPADVKE   +Y F+VDMPGL +GDI+V+VED+ VL+IS           AKY+RMERR+GKFMRKFVLP+NA+V+ ++AVC+DGVLTVTV+           TIE+K+A
Sbjct:    1 MDARMFGLET-PRVAALHHLLDVPDGDKAGGGA----TRTYVRDARAMAATPADVKELAGAYAFVVDMPGLSTGDIRVQVEDERVLVIS-GERRREEREDAKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVTVEKLPPPEPKKPKTIEIKVA 154          
The following BLAST results are available for this feature:
BLAST of DN135143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
HSP21_SOYBN6.689e-5568.7517.9 kDa class II heat shock protein OS=Glycine ma... [more]
HSP21_SOLPE6.261e-5366.2517.3 kDa class II heat shock protein OS=Solanum pe... [more]
HSP21_PEA3.555e-4864.5217.1 kDa class II heat shock protein OS=Pisum sati... [more]
HSP21_IPONI3.679e-4563.7517.2 kDa class II heat shock protein OS=Ipomoea ni... [more]
HSP21_HELAN2.637e-4359.2417.9 kDa class II heat shock protein OS=Helianthus... [more]
HSP22_IPONI1.889e-4157.4918.8 kDa class II heat shock protein OS=Ipomoea ni... [more]
HSP22_MAIZE5.497e-4153.9417.8 kDa class II heat shock protein OS=Zea mays P... [more]
HSP21_MAIZE3.563e-4055.2117.5 kDa class II heat shock protein OS=Zea mays P... [more]
HSP18_ORYSJ3.335e-3852.1018.0 kDa class II heat shock protein OS=Oryza sati... [more]
HSP23_MAIZE5.689e-3852.5017.0 kDa class II heat shock protein OS=Zea mays G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionwca06h05 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca06h05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135143 ID=DN135143; Name=DN135143; organism=Citrus sinensis; type=EST; length=671bp
GCCGGGGGAACCAACAAAATACTTAACGAACGNNNGNNNNCTCATTTAGC
AGTAGCGAACATCAACAACAGCTAATACTCGCAAAAGAATGGATTTCAGA
ATCATGGGTTTGGACTCATCGCCACTCTTTTCAACTCTGCAGCACATGAT
GGAGATGGGGGCGGACGACTCCGCTGACAACAAGTCATTCAACGCGCCGA
CGCGCACGTACGTGAGAGACGCCAAGGCAATGGCGGGGACGCCTGCGGAC
GTAAAGGAGTATCCGAACTCGTACGTGTTCATCGTCGACATGCCCGGACT
GAAGTCGGGGGACATCAAGGTCCGAGTGGAGGACGACAATGTGCTGCTCA
TAAGCGGAGAGAGGAAGCGGGAGGAGGAGAAAGAGGGGGCCAAGTATGTG
AGAATGGAGAGGAGGGTCGGCAAGTTTATGAGGAAATTTGTGCTGCCTGA
GAATGCTAACGTTGAAGCCATTTCGGCTGTGTGTCAGGACGGAGTGTTGA
CTGTGACCGTCGATAAGCTGCCACCGCCGGAGCCCAAGAAGCCCAAGACC
ATTGAGGTTAAGATTGCTTGAACTTTAANNAGAGAGAATNTGCCGGATTG
TGGGTGCTGAAGTCTTTTCTATTTGNNNGTTATTGTTATGAANNATTTTG
CTTGTGGGTGTGACGGTANTA
back to top