DN135075

Overview
NameDN135075
Unique NameDN135075
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN135075_ssr107 microsatellite DN135075_ssr107:107..122. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DN135075 vs. ExPASy Swiss-Prot
Match: DNJ20_ARATH (Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana GN=ATJ20 PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 4.618e-36
Identity = 76/121 (62.81%), Postives = 90/121 (74.38%), Query Frame = 2
Query:  230 YPTSVSFGSLKVKAKLNDXXXXXXXXXXVVDESKELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLHLAFSARRRQQND 592
            YPT   F S +++++L             V +S++LSFYDLLG+ ESV+L EIKQAYKQ+ARKYHPDVSPPDRVEEYT RFIRVQEAYETLSDP  R LYDRDLSMG   +FS RR+ + D
Sbjct:   38 YPTRTRFSSTRIQSRLTHDDP--------VKQSEDLSFYDLLGVTESVTLPEIKQAYKQLARKYHPDVSPPDRVEEYTDRFIRVQEAYETLSDPRRRVLYDRDLSMGFSFSFSGRRQNRYD 150          
BLAST of DN135075 vs. ExPASy Swiss-Prot
Match: DNAJ_THESQ (Chaperone protein dnaJ OS=Thermotoga sp. (strain RQ2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 9.370e-13
Identity = 33/71 (46.48%), Postives = 51/71 (71.83%), Query Frame = 2
Query:  323 ESKELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR 535
            + ++  +Y++LG+P   +  EIK+AYK++ +++HPD  P +R +E  QRF  +QEAYE LSDP  RA+YDR
Sbjct:    2 KKEKKDYYEILGVPRDATQEEIKRAYKRLVKEWHPDRHPENR-KEAEQRFKEIQEAYEVLSDPQKRAMYDR 71          
BLAST of DN135075 vs. ExPASy Swiss-Prot
Match: DNAJ_THEMA (Chaperone protein dnaJ OS=Thermotoga maritima GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 9.370e-13
Identity = 33/71 (46.48%), Postives = 51/71 (71.83%), Query Frame = 2
Query:  323 ESKELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR 535
            + ++  +Y++LG+P   +  EIK+AYK++ +++HPD  P +R +E  QRF  +QEAYE LSDP  RA+YDR
Sbjct:    2 KKEKKDYYEILGVPRDATQEEIKRAYKRLVKEWHPDRHPENR-KEAEQRFKEIQEAYEVLSDPQKRAMYDR 71          
BLAST of DN135075 vs. ExPASy Swiss-Prot
Match: DNAJ_THEP1 (Chaperone protein dnaJ OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.224e-12
Identity = 33/65 (50.77%), Postives = 48/65 (73.85%), Query Frame = 2
Query:  341 FYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR 535
            +Y++LG+P   +  EIK+AYK++ +++HPD  P +R +E  QRF  +QEAYE LSDP  RA+YDR
Sbjct:    8 YYEILGVPRDATQEEIKRAYKRLVKEWHPDRHPENR-KEAEQRFKEIQEAYEVLSDPQKRAMYDR 71          
BLAST of DN135075 vs. ExPASy Swiss-Prot
Match: DNAJ_THENN (Chaperone protein dnaJ OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.087e-12
Identity = 32/65 (49.23%), Postives = 49/65 (75.38%), Query Frame = 2
Query:  341 FYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR 535
            +Y++LG+P + +  EI++AYK++ +++HPD  P +R +E  QRF  +QEAYE LSDP  RA+YDR
Sbjct:    8 YYEILGVPRNATQEEIRKAYKRLVKEWHPDRHPENR-KEAEQRFKEIQEAYEVLSDPQKRAMYDR 71          
BLAST of DN135075 vs. ExPASy Swiss-Prot
Match: DNAJ_THETN (Chaperone protein dnaJ OS=Thermoanaerobacter tengcongensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.036e-11
Identity = 38/81 (46.91%), Postives = 53/81 (65.43%), Query Frame = 2
Query:  344 YDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLHLAFSARRRQQ 586
            Y++LG+  + S  EIK+AY+++A+KYHPD++P D+  E  Q+F  + EAYE LSDP  RA YD+    G H AF     QQ
Sbjct:    7 YEILGVDRNASQEEIKKAYRRLAKKYHPDLNPGDK--EAEQKFKEINEAYEILSDPQKRAQYDQ---FG-HAAFEQGGSQQ 81          
BLAST of DN135075 vs. ExPASy Swiss-Prot
Match: DNAJ2_AQUAE (Chaperone protein dnaJ 2 OS=Aquifex aeolicus GN=dnaJ2 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.036e-11
Identity = 37/87 (42.53%), Postives = 51/87 (58.62%), Query Frame = 2
Query:  326 SKELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLHLAFSARRRQQ 586
            S +  +Y++LG+P + S  EIK+AY+++ RKYHPD+      EE   +F  + EAY+ LSDP  R LYD    M  H AF     QQ
Sbjct:    4 STKKDYYEILGVPRNASQEEIKKAYRRLVRKYHPDICKKPECEE---KFKEINEAYQVLSDPEKRKLYD----MYGHAAFEGAGAQQ 83          
BLAST of DN135075 vs. ExPASy Swiss-Prot
Match: MAS5_YEAST (Mitochondrial protein import protein MAS5 OS=Saccharomyces cerevisiae GN=YDJ1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.353e-11
Identity = 34/69 (49.28%), Postives = 46/69 (66.67%), Query Frame = 2
Query:  329 KELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR 535
            KE  FYD+LG+P + + VEIK+AY++ A KYHPD +P    EE  ++F     AYE LSDP  R +YD+
Sbjct:    3 KETKFYDILGVPVTATDVEIKKAYRKCALKYHPDKNPS---EEAAEKFKEASAAYEILSDPEKRDIYDQ 68          
BLAST of DN135075 vs. ExPASy Swiss-Prot
Match: DNAJ_THEAB (Chaperone protein dnaJ OS=Thermosipho africanus (strain TCF52B) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.353e-11
Identity = 32/65 (49.23%), Postives = 48/65 (73.85%), Query Frame = 2
Query:  341 FYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR 535
            +Y++LG+  + S  EI+QAYKQ+ +K+HPD +  +R +E  ++F  +QEAYE LSDP  RA+YDR
Sbjct:    6 YYEILGVSRNASQEEIRQAYKQLIKKWHPDRNHQNR-KEAEEKFKEIQEAYEVLSDPEKRAMYDR 69          
BLAST of DN135075 vs. ExPASy Swiss-Prot
Match: DNAJ_ANATD (Chaperone protein dnaJ OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.014e-11
Identity = 29/70 (41.43%), Postives = 51/70 (72.86%), Query Frame = 2
Query:  326 SKELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDR 535
            +++  +Y++LG+P + +  EIK+AY+++A++YHPD +P ++  E  ++F  + EAYE LSDP  R LYD+
Sbjct:    2 AQKKDYYEILGVPRNATEEEIKRAYRRLAKQYHPDANPGNK--EAEEKFKEINEAYEVLSDPEKRKLYDQ 69          
The following BLAST results are available for this feature:
BLAST of DN135075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
DNJ20_ARATH4.618e-3662.81Chaperone protein dnaJ 20, chloroplastic OS=Arabid... [more]
DNAJ_THESQ9.370e-1346.48Chaperone protein dnaJ OS=Thermotoga sp. (strain R... [more]
DNAJ_THEMA9.370e-1346.48Chaperone protein dnaJ OS=Thermotoga maritima GN=d... [more]
DNAJ_THEP11.224e-1250.77Chaperone protein dnaJ OS=Thermotoga petrophila (s... [more]
DNAJ_THENN2.087e-1249.23Chaperone protein dnaJ OS=Thermotoga neapolitana (... [more]
DNAJ_THETN1.036e-1146.91Chaperone protein dnaJ OS=Thermoanaerobacter tengc... [more]
DNAJ2_AQUAE1.036e-1142.53Chaperone protein dnaJ 2 OS=Aquifex aeolicus GN=dn... [more]
MAS5_YEAST1.353e-1149.28Mitochondrial protein import protein MAS5 OS=Sacch... [more]
DNAJ_THEAB1.353e-1149.23Chaperone protein dnaJ OS=Thermosipho africanus (s... [more]
DNAJ_ANATD3.014e-1141.43Chaperone protein dnaJ OS=Anaerocellum thermophilu... [more]

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Properties
Property NameValue
Genbank descriptionwca05g12 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca05g12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135075 ID=DN135075; Name=DN135075; organism=Citrus sinensis; type=EST; length=624bp
GGGGATACTTTATTANNNNAAAACTAAGGCCAAAAATAAAAAAAAATAAA
ACCAGCAACAGAATAAGATCAGAGCACCGCAAACAGAGGGAGTTGAGTGT
GAAAACGAGAGAGAGAGAGAGATGCGTTGCAGCAGCTATGGATTGATAAT
TCCCGGAAGCGAATCCCGCTTCCTGACCACCACCACTACCCCAACCACCA
ACAAAAAACCTGACCGGTTTCCCCGGATTTACCCGACCAGCGTATCATTC
GGGTCGTTGAAAGTGAAGGCGAAATTAAACGACGCCGCCGGTGGTACGGC
TACTGCTACTGCTGTAGTCGACGAATCGAAGGAGCTGAGCTTCTACGATC
TCTTGGGCATACCGGAGTCCGTGAGCTTGGTGGAGATAAAGCAGGCGTAT
AAGCAGATGGCCCGCAAGTACCATCCTGACGTATCGCCGCCGGATCGGGT
CGAGGAATACACCCAGCGGTTTATTCGGGTCCAGGAGGCCTATGAAACGC
TGTCGGATCCCGGATTGCGTGCTCTCTACGATCGCGACTTGTCCATGGGC
CTTCACCTCGCTTTCTCCGCCCGAAGACGCCAGCAAAACGACGTGGTATT
GTTTATTTATTCGCTTCATTCTTG
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