DN135074
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN135074 vs. ExPASy Swiss-Prot
Match: ERG1_PANGI (Squalene monooxygenase OS=Panax ginseng PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 3.838e-24 Identity = 57/73 (78.08%), Postives = 59/73 (80.82%), Query Frame = 2 Query: 314 DVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYAL 532 DVI LA TLA DGRRVHVIERDL+E DRIVGELLQPGGYLKLIELGLEDCV +IDAQRVFGYAL Sbjct: 76 DVIIVGAGVAGSALAYTLANDGRRVHVIERDLTEQDRIVGELLQPGGYLKLIELGLEDCVNEIDAQRVFGYAL 148
BLAST of DN135074 vs. ExPASy Swiss-Prot
Match: ERG12_ARATH (Squalene monooxygenase 1,2 OS=Arabidopsis thaliana GN=SQP1,2 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 5.935e-17 Identity = 43/74 (58.11%), Postives = 53/74 (71.62%), Query Frame = 2 Query: 311 ADVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYAL 532 ADVI LA LAKDGRRVHVIERD+ EP+R++GE +QPGG L L +LGL+DC+E IDAQ+ G A+ Sbjct: 46 ADVIIVGAGVGGSALAYALAKDGRRVHVIERDMREPERMMGEFMQPGGRLMLSKLGLQDCLEDIDAQKATGLAV 119
BLAST of DN135074 vs. ExPASy Swiss-Prot
Match: ERG11_ARATH (Squalene monooxygenase 1,1 OS=Arabidopsis thaliana GN=SQP1,1 PE=2 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.012e-16 Identity = 44/70 (62.86%), Postives = 50/70 (71.43%), Query Frame = 2 Query: 314 DVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFG 523 DVI LA LAKDGRRVHVIERDL EP+RI+GE +QPGG L L +LGLEDC+E IDAQ+ G Sbjct: 47 DVIIVGAGVGGSALAYALAKDGRRVHVIERDLREPERIMGEFMQPGGRLMLSKLGLEDCLEGIDAQKATG 116
BLAST of DN135074 vs. ExPASy Swiss-Prot
Match: ERG11_BRANA (Squalene monooxygenase 1,1 OS=Brassica napus GN=SQP1,1 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.322e-16 Identity = 48/96 (50.00%), Postives = 57/96 (59.38%), Query Frame = 2 Query: 245 DNGADSLRKTPTTALNGECPFDADVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYAL 532 +N + K P A DADVI LA LAKDGRRVHVIERD+ EP R++GE +QPGG L L +LGLEDC+E ID Q G A+ Sbjct: 26 NNRRKKVAKLPDAATEVRRDGDADVIIVGAGVGGSALAYALAKDGRRVHVIERDMREPVRMMGEFMQPGGRLLLSKLGLEDCLEGIDEQIATGLAV 121
BLAST of DN135074 vs. ExPASy Swiss-Prot
Match: ERG12_BRANA (Squalene monooxygenase 1,2 OS=Brassica napus GN=SQP1,2 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.119e-15 Identity = 42/73 (57.53%), Postives = 51/73 (69.86%), Query Frame = 2 Query: 314 DVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYAL 532 DVI LA LAKDGRRVHVIERD+ EP R++GE +QPGG L L +LGL+DC+E+IDAQ+ G L Sbjct: 50 DVIIVGAGVGGSALAYALAKDGRRVHVIERDMREPVRMMGEFMQPGGRLMLSKLGLQDCLEEIDAQKSTGIRL 122
BLAST of DN135074 vs. ExPASy Swiss-Prot
Match: ERG1_RAT (Squalene monooxygenase OS=Rattus norvegicus GN=Sqle PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.257e-15 Identity = 44/101 (43.56%), Postives = 59/101 (58.42%), Query Frame = 2 Query: 230 RSKSEDNGADSLRKTPTTALNGECPFDADVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYAL 532 R + E N +++ T+++ D +VI LA L++DGR V VIERDL EPDRI+GE LQPGGY L ELGL D VE ++A + GY + Sbjct: 96 RRRKEVNLSETTLTGAATSVSTSSVTDPEVIIIGSGVLGSALATVLSRDGRTVTVIERDLKEPDRILGECLQPGGYRVLRELGLGDTVESLNAHHIHGYVI 196
BLAST of DN135074 vs. ExPASy Swiss-Prot
Match: ERG13_ARATH (Squalene monooxygenase 2 OS=Arabidopsis thaliana GN=SQP2 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.257e-15 Identity = 42/73 (57.53%), Postives = 47/73 (64.38%), Query Frame = 2 Query: 314 DVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYAL 532 DVI LA LAKDGRRVHVIERDL EP R +GEL+Q GG L +LGLEDC+E IDAQ A+ Sbjct: 45 DVIIVGAGVAGASLAYALAKDGRRVHVIERDLKEPQRFMGELMQAGGRFMLAQLGLEDCLEDIDAQEAKSLAI 117
BLAST of DN135074 vs. ExPASy Swiss-Prot
Match: ERG1_MOUSE (Squalene monooxygenase OS=Mus musculus GN=Sqle PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 7.255e-15 Identity = 42/73 (57.53%), Postives = 49/73 (67.12%), Query Frame = 2 Query: 308 DADVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGY 526 D +VI LA L++DGR+V VIERDL EPDRIVGELLQPGGY L ELGL D VE ++A + GY Sbjct: 121 DPEVIIVGSGVLGSALAAVLSRDGRKVTVIERDLKEPDRIVGELLQPGGYRVLQELGLGDTVEGLNAHHIHGY 193
BLAST of DN135074 vs. ExPASy Swiss-Prot
Match: ERG1_HUMAN (Squalene monooxygenase OS=Homo sapiens GN=SQLE PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 2.757e-14 Identity = 42/75 (56.00%), Postives = 49/75 (65.33%), Query Frame = 2 Query: 308 DADVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYAL 532 D +VI L L++DGR+V VIERDL EPDRIVGE LQPGGY L +LGL D VE +DAQ V GY + Sbjct: 123 DPEVIIVGAGVLGSALVAVLSRDGRKVTVIERDLKEPDRIVGEFLQPGGYHVLKDLGLGDTVEGLDAQVVNGYMI 197
BLAST of DN135074 vs. ExPASy Swiss-Prot
Match: ERG1_SCHPO (Probable squalene monooxygenase OS=Schizosaccharomyces pombe GN=SPBC713.12 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.199e-13 Identity = 38/75 (50.67%), Postives = 47/75 (62.67%), Query Frame = 2 Query: 308 DADVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYAL 532 DAD+I L L + GR+V V+ERD+SEPDRIVGELLQPGG L ++G+ D VE ID Q GY + Sbjct: 5 DADIIIIGAGITGCALGAALGRQGRKVLVLERDMSEPDRIVGELLQPGGIEALEKIGIADAVEGIDGQWTSGYQI 79 The following BLAST results are available for this feature:
BLAST of DN135074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN135074 ID=DN135074; Name=DN135074; organism=Citrus sinensis; type=EST; length=534bpback to top |