DN135045

Overview
NameDN135045
Unique NameDN135045
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length594
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2614 contig Csv1_Contig2614:117..709. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135045 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.642e-22
Identity = 45/66 (68.18%), Postives = 54/66 (81.82%), Query Frame = 2
Query:   92 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTRG 289
            MSDTCGNCDCAD++QCVKKGSSY AD +ET+ S ++  VVMD  AAE +G CKCGP+C+C NCT G
Sbjct:    1 MSDTCGNCDCADKTQCVKKGSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64          
BLAST of DN135045 vs. ExPASy Swiss-Prot
Match: MT3_ACTDE (Metallothionein-like protein type 3 OS=Actinidia deliciosa GN=pKIWI503 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.148e-17
Identity = 43/64 (67.19%), Postives = 48/64 (75.00%), Query Frame = 2
Query:   92 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCT 283
            MSD CGNCDCAD SQCVKKG+S   D VETD S++   VVM V AAE+ G CKCG +C CVNCT
Sbjct:    1 MSDKCGNCDCADSSQCVKKGNS--IDIVETDKSYIED-VVMGVPAAESGGKCKCGTSCPCVNCT 61          
BLAST of DN135045 vs. ExPASy Swiss-Prot
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.959e-17
Identity = 38/64 (59.38%), Postives = 47/64 (73.44%), Query Frame = 2
Query:  101 TCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTRGS 292
            TCGNCDC D+SQCVKKG+SY  D VET+ S+V  V+V   +AAE +G CKCG  CAC +C  G+
Sbjct:    3 TCGNCDCVDKSQCVKKGNSYGIDIVETEKSYVDEVIVA-AEAAEHDGKCKCGAACACTDCKCGN 65          
BLAST of DN135045 vs. ExPASy Swiss-Prot
Match: MT3_PRUAV (Metallothionein-like protein 1 OS=Prunus avium GN=MT1 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.404e-15
Identity = 37/63 (58.73%), Postives = 44/63 (69.84%), Query Frame = 2
Query:   92 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNC 280
            MS  C NCDC+D SQC KKG S+    VET+   + TV+ MD  AAE  GNCKCGP+CACV+C
Sbjct:    1 MSSKCSNCDCSDSSQCTKKGYSFDLVIVETENRSMDTVI-MDAPAAENGGNCKCGPSCACVDC 62          
BLAST of DN135045 vs. ExPASy Swiss-Prot
Match: MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica GN=MT2 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.968e-15
Identity = 38/66 (57.58%), Postives = 45/66 (68.18%), Query Frame = 2
Query:   92 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTRG 289
            MS  C NCDCAD +QCVKKG+SY    VET+   + TV V D  AAE +G CKCG  C+CV+CT G
Sbjct:    1 MSGKCDNCDCADSTQCVKKGNSYDLVIVETENRSMDTVFV-DAPAAEHDGKCKCGTGCSCVSCTCG 65          
BLAST of DN135045 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSJ (Metallothionein-like protein 3A OS=Oryza sativa subsp. japonica GN=MT3A PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.648e-14
Identity = 35/66 (53.03%), Postives = 42/66 (63.64%), Query Frame = 2
Query:   92 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTRG 289
            MSD CGNCDCAD+SQCVKKG+SY    VE + S        +V A E  G CKCG +C+C +C  G
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of DN135045 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSI (Metallothionein-like protein 3A OS=Oryza sativa subsp. indica GN=MT3A PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.648e-14
Identity = 35/66 (53.03%), Postives = 42/66 (63.64%), Query Frame = 2
Query:   92 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTRG 289
            MSD CGNCDCAD+SQCVKKG+SY    VE + S        +V A E  G CKCG +C+C +C  G
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of DN135045 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSJ (Metallothionein-like protein 3B OS=Oryza sativa subsp. japonica GN=MT3B PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.478e-12
Identity = 32/66 (48.48%), Postives = 40/66 (60.61%), Query Frame = 2
Query:   92 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTRG 289
            MSD CGNCDCAD+SQCVKKG+SY    V+ + S     +  +V   E +G CKC   C+C  C  G
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
BLAST of DN135045 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSI (Metallothionein-like protein 3B OS=Oryza sativa subsp. indica GN=MT3B PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 9.417e-12
Identity = 31/66 (46.97%), Postives = 40/66 (60.61%), Query Frame = 2
Query:   92 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTRG 289
            MSD CG+CDCAD+SQCVKKG+SY    V+ + S     +  +V   E +G CKC   C+C  C  G
Sbjct:    1 MSDKCGHCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
The following BLAST results are available for this feature:
BLAST of DN135045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
MT3_CARPA2.642e-2268.18Metallothionein-like protein type 3 OS=Carica papa... [more]
MT3_ACTDE1.148e-1767.19Metallothionein-like protein type 3 OS=Actinidia d... [more]
MT3_MUSAC1.959e-1759.38Metallothionein-like protein type 3 OS=Musa acumin... [more]
MT3_PRUAV1.404e-1558.73Metallothionein-like protein 1 OS=Prunus avium GN=... [more]
MT3_MALDO6.968e-1557.58Metallothionein-like protein type 3 OS=Malus domes... [more]
MT3A_ORYSJ2.648e-1453.03Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3A_ORYSI2.648e-1453.03Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3B_ORYSJ2.478e-1248.48Metallothionein-like protein 3B OS=Oryza sativa su... [more]
MT3B_ORYSI9.417e-1246.97Metallothionein-like protein 3B OS=Oryza sativa su... [more]
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Properties
Property NameValue
Genbank descriptionwca05d05 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca05d05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135045 ID=DN135045|Name=DN135045|organism=Citrus sinensis|type=EST|length=594bp
GGGGATCATCACAGCAANNCAAAGCAAGTTTCGTACAATAAAGAGCTCCT
CTATTTCCAGTTTTAAATTCCAAGTTCTANNCTCAATCAACATGTCGGAC
ACCTGCGGCAACTGCGACTGCGCTGACAGGAGCCAGTGTGTGAAGAAGGG
AAGCAGCTATGCTGCTGACTTCGTCGAGACTGACTTGAGCTTTGTCAGCA
CCGTTGTTGTCATGGACGTTCAGGCTGCTGAGACTGAAGGTAACTGCAAG
TGCGGCCCCACCTGCGCTTGTGTGAACTGCACTCGTGGTAGTCACTAATA
AGCAAACACATGCAGCAAAAAATAAGAAGCTGCAAGTGTGCCTAAATATT
GTGGGGGTTAAGAATAATGTAAGGGTGATTAAAAAAAAAGAAAAATTCTC
TACTTCGCTTTTATGATGGTCTACTACTAGTGTGTGGAGTGATGTGCGTG
TTGTGTCACCCATCACTCGTAATGTTTTGTGTTTCCTTCTTCATAATCAT
GTGATATATGGCCATGGCCATGACCGTGGCCTTTGTGTGGTTTAATTTTT
ATGTATTATTGTTAGTCAAAAAAAATAANAAAANNAAAAAAAAA
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