EG358209

Overview
NameEG358209
Unique NameEG358209
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length441
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6867 contig Csv1_Contig6867:22..462. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358209 vs. ExPASy Swiss-Prot
Match: CYB5_TOBAC (Cytochrome b5 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.657e-14
Identity = 45/111 (40.54%), Postives = 64/111 (57.66%), Query Frame = 2
Query:    5 NVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETS----NNASFQEPKKKEMEAFVVKDNGVPKYAALLEFFVPLLVAGSYFAYRY 325
            +VT+FL++HPGG+EVL+ A GKDAT  FE++GHS +A  +L  Y VG +    +  T+T     N   + + K  E   FVVK         LL+F VPL++ G  F  R+
Sbjct:   32 DVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSARAMLDEYYVGDIDSATI-PTKTKYTPPNQPHYNQDKTSE---FVVK---------LLQFLVPLIILGVAFGIRF 129          
BLAST of EG358209 vs. ExPASy Swiss-Prot
Match: CYB5S_TOBAC (Cytochrome b5, seed isoform OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 6.239e-14
Identity = 41/107 (38.32%), Postives = 57/107 (53.27%), Query Frame = 2
Query:    5 NVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQEPKKKEMEAFVVKDNGVPKYAALLEFFVPLLVAGSYFAYRY 325
            NVT+FLE+HPGG EVL+ A GKDAT  FE+IGHS +A  +L  Y VG      ++ +       +  PK+        +D        LL+F VPL++ G  F   +
Sbjct:   32 NVTKFLEDHPGGGEVLLSATGKDATDDFEDIGHSSSARAMLDEYYVG-----DIDSSTIPTKVKYTPPKQPHYN----QDKTTEFIVKLLQFLVPLIILGVAFGVHF 129          
BLAST of EG358209 vs. ExPASy Swiss-Prot
Match: CYB52_ARATH (Probable cytochrome b5 isoform 2 OS=Arabidopsis thaliana GN=At2g32720 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.390e-13
Identity = 38/100 (38.00%), Postives = 58/100 (58.00%), Query Frame = 2
Query:    5 NVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQEPKKKEMEAFVVKDNGVPKYAALLEFFVPLLVAG 304
            NVT+FLE+HPGG++VL+ + GKDAT  FE++GHS++A E++  Y VG     +++ T       +  PK+        +D        LL+F VPL + G
Sbjct:   32 NVTKFLEDHPGGDDVLLSSTGKDATDDFEDVGHSESAREMMEQYYVG-----EIDPTTIPKKVKYTPPKQPHYN----QDKTSEFIIKLLQFLVPLAILG 122          
BLAST of EG358209 vs. ExPASy Swiss-Prot
Match: CYB5_BOROF (Cytochrome b5 OS=Borago officinalis PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.177e-12
Identity = 40/112 (35.71%), Postives = 61/112 (54.46%), Query Frame = 2
Query:    5 NVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQEPKK-----KEMEAFVVKDNGVPKYAALLEFFVPLLVAGSYFAYRY 325
            +VT+FLE+HPGG++VL+ A GKDAT  FE+IGHS +A  +L  Y VG      ++ +   +   +  PK+      +   FV+K         LL+F VPL++       R+
Sbjct:   29 DVTKFLEDHPGGDDVLLSATGKDATDDFEDIGHSSSAKAMLDEYYVG-----DIDSSSIPSQVKYTPPKQPLYNPDKTREFVIK---------LLQFLVPLVILAGAIGIRF 126          
BLAST of EG358209 vs. ExPASy Swiss-Prot
Match: CYB5_MUSDO (Cytochrome b5 OS=Musca domestica GN=Cyt-b5 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.621e-12
Identity = 33/72 (45.83%), Postives = 47/72 (65.28%), Query Frame = 2
Query:    5 NVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQEPKKKE 220
            +VT FL EHPGGEEVL+E AGKDAT+ FE++GHS  A E++  Y+VG L   +  +    +  ++   +K E
Sbjct:   33 DVTAFLNEHPGGEEVLIEQAGKDATEHFEDVGHSSDAREMMKQYKVGELVAEERSNVPEKSEPTWNTEQKTE 104          
BLAST of EG358209 vs. ExPASy Swiss-Prot
Match: CYB51_ARATH (Cytochrome b5 isoform 1 OS=Arabidopsis thaliana GN=At5g53560 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.423e-12
Identity = 36/110 (32.73%), Postives = 61/110 (55.45%), Query Frame = 2
Query:    5 NVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTET---SNNASFQEPKKKEMEAFVVKDNGVPKYAALLEFFVPLLVAGSYFAYRY 325
            +VT F+++HPGG+EVL+ + GKDAT  FE++GHS  A +++  Y +G +    +  T T       ++ + K  E   F++K         +L+F VP+L+ G     R+
Sbjct:   32 DVTPFMDDHPGGDEVLLSSTGKDATNDFEDVGHSDTARDMMDKYFIGEIDSSSVPATRTYVAPQQPAYNQDKTPE---FIIK---------ILQFLVPILILGLALVVRH 129          
BLAST of EG358209 vs. ExPASy Swiss-Prot
Match: CYB5_CANTR (Cytochrome b5 OS=Candida tropicalis GN=Cytb5 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.471e-12
Identity = 29/67 (43.28%), Postives = 49/67 (73.13%), Query Frame = 2
Query:    5 NVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQE 205
            N++ +++EHPGGEEV+++ AG DAT+ F++IGHS  AHE+L    +G L+G K+ + + + + S +E
Sbjct:   35 NISNYIDEHPGGEEVILDCAGTDATEAFDDIGHSDEAHEILEKLYIGNLKGAKIVEAKHAQSFSTEE 101          
BLAST of EG358209 vs. ExPASy Swiss-Prot
Match: CYB5_DROME (Cytochrome b5 OS=Drosophila melanogaster GN=Cyt-b5 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.839e-12
Identity = 39/93 (41.94%), Postives = 58/93 (62.37%), Query Frame = 2
Query:    5 NVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQEP---KKKEMEAFVVKDNGVPKYAALL 274
            +VT FL EHPGGEEVL+E AGKDAT+ FE++GHS  A +++  Y++G     +L ++E ++ A   EP    +++ E   VK   VP    L+
Sbjct:   33 DVTAFLNEHPGGEEVLIEQAGKDATENFEDVGHSNDARDMMKKYKIG-----ELVESERTSVAQKSEPTWSTEQQTEESSVKSWLVPLVLCLV 120          
BLAST of EG358209 vs. ExPASy Swiss-Prot
Match: CYB5B_PONAB (Cytochrome b5 type B OS=Pongo abelii GN=CYB5B PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 9.960e-12
Identity = 36/95 (37.89%), Postives = 53/95 (55.79%), Query Frame = 2
Query:    5 NVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQEPKKKEMEAFVVKDNGVPKYAALLEFFVP 289
            +VTRFL EHPGGEEVL+E AG DA++ FE++GHS  A E+L  Y +G +    L+    S + S  +  K     +++   G      L  ++ P
Sbjct:   47 DVTRFLNEHPGGEEVLLEQAGVDASESFEDVGHSSDAREMLKQYYIGDIHPSDLKPENGSKDPSKNDTCKSCWAYWILPIIGAVLLGFLYRYYTP 141          
BLAST of EG358209 vs. ExPASy Swiss-Prot
Match: CYB5B_MOUSE (Cytochrome b5 type B OS=Mus musculus GN=Cyb5b PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 9.960e-12
Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = 2
Query:    5 NVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKL----EDTETSNNASFQ 202
            ++TRFL EHPGGEEVL+E AG DAT+ FE++GHS  A E+L  Y +G +    L    +D + S N S Q
Sbjct:   47 DITRFLSEHPGGEEVLLEQAGADATESFEDVGHSPDAREMLKQYYIGDVHPSDLKPKGDDKDPSKNNSCQ 116          
The following BLAST results are available for this feature:
BLAST of EG358209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
CYB5_TOBAC3.657e-1440.54Cytochrome b5 OS=Nicotiana tabacum PE=2 SV=1[more]
CYB5S_TOBAC6.239e-1438.32Cytochrome b5, seed isoform OS=Nicotiana tabacum P... [more]
CYB52_ARATH1.390e-1338.00Probable cytochrome b5 isoform 2 OS=Arabidopsis th... [more]
CYB5_BOROF1.177e-1235.71Cytochrome b5 OS=Borago officinalis PE=2 SV=1[more]
CYB5_MUSDO2.621e-1245.83Cytochrome b5 OS=Musca domestica GN=Cyt-b5 PE=1 SV... [more]
CYB51_ARATH3.423e-1232.73Cytochrome b5 isoform 1 OS=Arabidopsis thaliana GN... [more]
CYB5_CANTR4.471e-1243.28Cytochrome b5 OS=Candida tropicalis GN=Cytb5 PE=3 ... [more]
CYB5_DROME5.839e-1241.94Cytochrome b5 OS=Drosophila melanogaster GN=Cyt-b5... [more]
CYB5B_PONAB9.960e-1237.89Cytochrome b5 type B OS=Pongo abelii GN=CYB5B PE=2... [more]
CYB5B_MOUSE9.960e-1250.00Cytochrome b5 type B OS=Mus musculus GN=Cyb5b PE=1... [more]

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Properties
Property NameValue
Genbank description2a12 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl002a12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358209 ID=EG358209; Name=EG358209; organism=Citrus sinensis; type=EST; length=441bp
ACTGAACGTTACAAGGTTCCTGGAAGAACACCCAGGAGGAGAGGAAGTGC
TGATGGAGGCGGCAGGGAAGGATGCAACAAAGCAGTTTGAGGAAATTGGA
CACAGCAAGGCTGCTCACGAGTTGCTCTTCAACTACCGGGTGGGTGTTCT
TCAAGGTTACAAGTTAGAAGACACAGAAACATCCAATAATGCTTCATTCC
AGGAGCCCAAAAAGAAAGAGATGGAGGCTTTTGTCGTCAAGGATAATGGC
GTGCCTAAATATGCAGCTCTTCTCGAGTTCTTTGTGCCACTCTTGGTTGC
TGGTTCCTACTTTGCTTACAGGTATCTGGCCTGAGCCCAGAACATCCTTG
ACTGGATCATCTGCTTCCTCTTATATGTCTGCTTGATGAATTGCTGCAAG
TCTCGCTGTCAGTAGGCAAGGCAACGAATGATTTAACCATG
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