CN185226

Overview
NameCN185226
Unique NameCN185226
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length678
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN185226_ssr29 microsatellite CN185226_ssr29:29..46. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1220 contig Csv1_Contig1220:190..867. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185226 vs. ExPASy Swiss-Prot
Match: WNK5_ARATH (Probable serine/threonine-protein kinase WNK5 OS=Arabidopsis thaliana GN=WNK5 PE=1 SV=2)

HSP 1 Score: 276.559 bits (706), Expect = 8.556e-74
Identity = 130/171 (76.02%), Postives = 152/171 (88.89%), Query Frame = 3
Query:  165 QLAGAGDEAKAHIGYIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVHGHLGQVKIG 677
            +++ A D++   I Y+ETDP+GRYG F EVLGKGAMKTVYKA D+VLG+EVAWNQV+LNE+ RSP+ LQRLYSEVHLL  L H+SIIR+ TSWIDV+++TFNFITE+FTSGTLREYR+KY++VDIRAIKSWARQIL GL YLH  DPPVIHRDLKCDNIFV+GHLGQVKIG
Sbjct:    4 EISSASDDS---IAYVETDPSGRYGRFREVLGKGAMKTVYKAFDQVLGMEVAWNQVKLNEVFRSPEPLQRLYSEVHLLKNLNHESIIRYCTSWIDVNRRTFNFITELFTSGTLREYRRKYQKVDIRAIKSWARQILNGLAYLHGHDPPVIHRDLKCDNIFVNGHLGQVKIG 171          
BLAST of CN185226 vs. ExPASy Swiss-Prot
Match: WNK4_ARATH (Probable serine/threonine-protein kinase WNK4 OS=Arabidopsis thaliana GN=WNK4 PE=1 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.974e-71
Identity = 126/157 (80.25%), Postives = 140/157 (89.17%), Query Frame = 3
Query:  207 YIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVHGHLGQVKIG 677
            Y+ETDP GRYG F E+LG+GAMKTVYKAIDE LG+EVAW+QV+L E++RS  DLQRLYSEVHLLSTL H SIIRFYTSWIDV   T NFITE+FTSGTLR+Y+ KY R+DIRAIKSWARQIL+GLVYLH  DPPVIHRDLKCDNIFV+GHLGQVKIG
Sbjct:    9 YVETDPTGRYGRFAEILGRGAMKTVYKAIDEKLGIEVAWSQVKLKEVLRSSVDLQRLYSEVHLLSTLNHKSIIRFYTSWIDVHNHTLNFITELFTSGTLRQYKNKYLRIDIRAIKSWARQILEGLVYLHEHDPPVIHRDLKCDNIFVNGHLGQVKIG 165          
BLAST of CN185226 vs. ExPASy Swiss-Prot
Match: WNK1_ORYSJ (Probable serine/threonine-protein kinase WNK1 OS=Oryza sativa subsp. japonica GN=WNK1 PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.159e-62
Identity = 110/169 (65.09%), Postives = 139/169 (82.25%), Query Frame = 3
Query:  171 AGAGDEAKAHIGYIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVHGHLGQVKIG 677
            A AGD  +    Y E DP GRYG + +VLGKGA KTVY+A DE  G+EVAWNQV+L++ ++SP+DL+RLY E+HLL TLKH +I++FYTSW+DV ++  NFITEMFTSGTLR+YR+K+ RV+I A+K W RQIL GL+YLHS DPP+IHRDLKCDNIFV+G+ G+VKIG
Sbjct:    9 AAAGDLPE----YAEVDPTGRYGRYNDVLGKGASKTVYRAFDEYQGMEVAWNQVKLHDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDVSRRNINFITEMFTSGTLRQYRQKHMRVNIWAVKHWCRQILSGLLYLHSHDPPIIHRDLKCDNIFVNGNQGEVKIG 173          
BLAST of CN185226 vs. ExPASy Swiss-Prot
Match: WNK1_ORYSI (Probable serine/threonine-protein kinase WNK1 OS=Oryza sativa subsp. indica GN=WNK1 PE=2 SV=2)

HSP 1 Score: 239.58 bits (610), Expect = 1.159e-62
Identity = 110/169 (65.09%), Postives = 139/169 (82.25%), Query Frame = 3
Query:  171 AGAGDEAKAHIGYIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVHGHLGQVKIG 677
            A AGD  +    Y E DP GRYG + +VLGKGA KTVY+A DE  G+EVAWNQV+L++ ++SP+DL+RLY E+HLL TLKH +I++FYTSW+DV ++  NFITEMFTSGTLR+YR+K+ RV+I A+K W RQIL GL+YLHS DPP+IHRDLKCDNIFV+G+ G+VKIG
Sbjct:    9 AAAGDLPE----YAEVDPTGRYGRYNDVLGKGASKTVYRAFDEYQGMEVAWNQVKLHDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDVSRRNINFITEMFTSGTLRQYRQKHMRVNIWAVKHWCRQILSGLLYLHSHDPPIIHRDLKCDNIFVNGNQGEVKIG 173          
BLAST of CN185226 vs. ExPASy Swiss-Prot
Match: WNK9_ARATH (Probable serine/threonine-protein kinase WNK9 OS=Arabidopsis thaliana GN=WNK9 PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 5.752e-62
Identity = 103/157 (65.61%), Postives = 132/157 (84.08%), Query Frame = 3
Query:  207 YIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVHGHLGQVKIG 677
            Y+E DP GRYG + EVLGKG+ KTVY+  DE  G+EVAWNQV+L + ++SP +L+RLY E+HLL TLKH SI++FY SW+D D +  NF+TEMFTSGTLR+YR K++RV+IRA+K+W RQIL+GL YLH+ DPPVIHRDLKCDNIF++G+ G+VKIG
Sbjct:   15 YVEVDPTGRYGRYNEVLGKGSSKTVYRGFDEYQGIEVAWNQVKLYDFLQSPQELERLYCEIHLLKTLKHKSIMKFYASWVDTDNRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKNWCRQILRGLNYLHTHDPPVIHRDLKCDNIFINGNQGEVKIG 171          
BLAST of CN185226 vs. ExPASy Swiss-Prot
Match: WNK3_ARATH (Probable serine/threonine-protein kinase WNK3 OS=Arabidopsis thaliana GN=WNK3 PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 9.812e-62
Identity = 109/165 (66.06%), Postives = 135/165 (81.82%), Query Frame = 3
Query:  183 DEAKAHIGYIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVHGHLGQVKIG 677
            DE  +   ++E DP GRYG ++EVLGKGA K VY+A D++ G+EVAWNQV+L++   S +DL RLYSEVHLL TLKH SII+FYTSWID    T N ITE+FTSG LR+YRKK++ VD+RA+K W+RQIL+GLVYLHS DPPVIHRDLKCDNIF++G+ G+VKIG
Sbjct:    4 DENNSEEEFVEIDPTGRYGRYKEVLGKGAFKEVYRAFDQLEGIEVAWNQVKLDDKFCSSEDLDRLYSEVHLLKTLKHKSIIKFYTSWIDHQHMTINLITEVFTSGNLRQYRKKHKCVDLRALKKWSRQILEGLVYLHSHDPPVIHRDLKCDNIFINGNQGEVKIG 168          
BLAST of CN185226 vs. ExPASy Swiss-Prot
Match: WNK1_ARATH (Serine/threonine-protein kinase WNK1 OS=Arabidopsis thaliana GN=WNK1 PE=1 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.674e-61
Identity = 104/157 (66.24%), Postives = 133/157 (84.71%), Query Frame = 3
Query:  207 YIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVHGHLGQVKIG 677
            ++E DP GRYG + EVLGKGA KTVY+A DE  G+EVAWNQV+L + ++SP+DL+RLY E+HLL TLKH +I++FYTSW+D   +  NF+TE+FTSGTLR+YR +++RV+IRA+K W RQIL+GL YLHS DPPVIHRDLKCDNIFV+G+ G+VKIG
Sbjct:   14 FVEVDPTGRYGRYNEVLGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTELFTSGTLRQYRLRHKRVNIRAMKHWCRQILRGLHYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIG 170          
BLAST of CN185226 vs. ExPASy Swiss-Prot
Match: WNK2_ARATH (Serine/threonine-protein kinase WNK2 OS=Arabidopsis thaliana GN=WNK2 PE=1 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.199e-59
Identity = 96/157 (61.15%), Postives = 133/157 (84.71%), Query Frame = 3
Query:  207 YIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVHGHLGQVKIG 677
            ++E DP+GRYG ++E+LGKGA KTVY+A DE  G+EVAWNQV+L    R+P++L++ + E+HLL TL H +I++FYTSW+D +  + NF+TE+FTSGTLR+YR ++RRV+IRA+K W +QIL+GL+YLHSR PP+IHRDLKCDNIF++G+ G+VKIG
Sbjct:   14 FVEIDPSGRYGRYDEILGKGASKTVYRAFDEYEGIEVAWNQVKLRNFTRNPEELEKFFREIHLLKTLNHQNIMKFYTSWVDTNNLSINFVTELFTSGTLRQYRLRHRRVNIRAVKQWCKQILKGLLYLHSRSPPIIHRDLKCDNIFINGNQGEVKIG 170          
BLAST of CN185226 vs. ExPASy Swiss-Prot
Match: WNK2_ORYSJ (Probable serine/threonine-protein kinase WNK2 OS=Oryza sativa subsp. japonica GN=WNK2 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 2.672e-59
Identity = 103/157 (65.61%), Postives = 130/157 (82.80%), Query Frame = 3
Query:  207 YIETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVHGHLGQVKIG 677
            + E DP  RYG + EVLGKGA KTVYKA D++ G+EVAWNQ+++ +++R+ DDL+RL SEV LL TLKH +II+FY SW+D      NFITE+FTSGTLR+YR K+++VD+RA+K W+RQIL GLVYLHS DPPVIHRDLKCDNIFV+G+ G+VKIG
Sbjct:   18 FAEVDPTARYGRYTEVLGKGAFKTVYKAFDQLEGLEVAWNQIKVGDILRNNDDLERLRSEVRLLKTLKHKNIIKFYNSWLDKKNNNINFITEVFTSGTLRQYRIKHKKVDVRALKKWSRQILSGLVYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIG 174          
BLAST of CN185226 vs. ExPASy Swiss-Prot
Match: WNK4_ORYSJ (Probable serine/threonine-protein kinase WNK4 OS=Oryza sativa subsp. japonica GN=WNK4 PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.490e-59
Identity = 101/156 (64.74%), Postives = 135/156 (86.54%), Query Frame = 3
Query:  210 IETDPNGRYGLFEEVLGKGAMKTVYKAIDEVLGVEVAWNQVRLNELMRSPDDLQRLYSEVHLLSTLKHDSIIRFYTSWIDVDQKTFNFITEMFTSGTLREYRKKYRRVDIRAIKSWARQILQGLVYLHSRDPPVIHRDLKCDNIFVHGHLGQVKIG 677
            +E DP  RY  + EVLG+GAMKTVYKA DEV G+EVAW+QV ++E+M+SPD+L+RLYSEVHLL +LKH+++++FY  W+D  +KT N ITE+FTSG+LR+YR+K+ RVD++AIK+WARQ+L+GL YLH+  PP+IHRDLKCDNIFV+G+ G+VKIG
Sbjct:   16 VEVDPTRRYIRYNEVLGRGAMKTVYKAFDEVEGIEVAWSQVEIDEVMQSPDNLERLYSEVHLLKSLKHENVMKFYNYWVDDQKKTINVITELFTSGSLRQYRQKHPRVDLKAIKNWARQVLRGLDYLHTHQPPIIHRDLKCDNIFVNGNHGEVKIG 171          
The following BLAST results are available for this feature:
BLAST of CN185226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
WNK5_ARATH8.556e-7476.02Probable serine/threonine-protein kinase WNK5 OS=A... [more]
WNK4_ARATH3.974e-7180.25Probable serine/threonine-protein kinase WNK4 OS=A... [more]
WNK1_ORYSJ1.159e-6265.09Probable serine/threonine-protein kinase WNK1 OS=O... [more]
WNK1_ORYSI1.159e-6265.09Probable serine/threonine-protein kinase WNK1 OS=O... [more]
WNK9_ARATH5.752e-6265.61Probable serine/threonine-protein kinase WNK9 OS=A... [more]
WNK3_ARATH9.812e-6266.06Probable serine/threonine-protein kinase WNK3 OS=A... [more]
WNK1_ARATH1.674e-6166.24Serine/threonine-protein kinase WNK1 OS=Arabidopsi... [more]
WNK2_ARATH1.199e-5961.15Serine/threonine-protein kinase WNK2 OS=Arabidopsi... [more]
WNK2_ORYSJ2.672e-5965.61Probable serine/threonine-protein kinase WNK2 OS=O... [more]
WNK4_ORYSJ3.490e-5964.74Probable serine/threonine-protein kinase WNK4 OS=O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001A04_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185226 ID=CN185226; Name=CN185226; organism=Citrus sinensis; type=EST; length=678bp
AGTGACTCTTTAATTATTTCATCTAATCTATATATATATATATATAGCTT
TTTGAGTTTGAATTTTCAAGTTTTCATTATTTATTTCCCCTTGCAAGTCT
TAAGATTTTGGCAACTGGGAAACAAAGTTTGTACTTGAAGATAAACAATA
TGTACAGCAATAAACAACTTGCAGGGGCTGGTGATGAAGCTAAGGCCCAT
ATTGGATACATTGAAACAGATCCTAATGGTCGCTATGGTCTTTTTGAAGA
GGTTCTTGGCAAAGGAGCAATGAAAACAGTGTACAAGGCAATTGATGAAG
TTCTTGGAGTGGAGGTGGCATGGAACCAAGTAAGGCTTAATGAGTTGATG
CGTTCACCAGATGATTTGCAGCGGCTGTACTCAGAAGTTCACCTCCTCAG
CACTCTCAAACACGATTCCATCATTCGATTCTACACCTCTTGGATTGATG
TAGATCAAAAGACATTCAACTTCATCACTGAAATGTTTACTTCAGGCACT
CTCAGAGAATACAGGAAAAAATATAGGAGGGTAGACATTCGGGCCATTAA
GAGTTGGGCGCGGCAAATCTTGCAAGGCCTTGTATATCTGCATAGCCGTG
ACCCTCCAGTAATTCATAGAGACCTCAAGTGTGATAACATCTTTGTCCAT
GGCCATCTTGGGCAAGTCAAGATTGGTG
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