CN185221

Overview
NameCN185221
Unique NameCN185221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1862 contig Csv1_Contig1862:211..1065. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185221 vs. ExPASy Swiss-Prot
Match: CYBP_MOUSE (Calcyclin-binding protein OS=Mus musculus GN=Cacybp PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.083e-22
Identity = 71/212 (33.49%), Postives = 109/212 (51.42%), Query Frame = -1
Query:  271 EELRQLRSIAKRPRIVSLINSEIHTLEKLSKE--------------EGPAPVPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKG---NWLDLQYKE--DKLKPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 840
            EE++ L   + R R+   + SE   +E   K               E PA V  P     T     + + ++ WDQ ++ VKIYI+L GV Q   + ++  F + SFD+   ++ GKNY      L + I  E S   VK   V+I+  K ++    ++L    KE  +K KP+ D E DP  G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct:   13 EEVKVLLEKSTRKRLRDTLTSEKSKIETELKNKMQQKSQKKPELDNEKPAAVVAPLTTGYT-----VKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKNYSMIVNNLLKPISVESSSKKVKTDTVIILCRKKAENTRWDYLTQVEKECKEKEKPSYDTEADPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 219          
BLAST of CN185221 vs. ExPASy Swiss-Prot
Match: CYBP_BOVIN (Calcyclin-binding protein OS=Bos taurus GN=CACYBP PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.639e-22
Identity = 70/213 (32.86%), Postives = 112/213 (52.58%), Query Frame = -1
Query:  271 EELRQLRSIAKRPRIVSLINSEIHTLE---------------KLSKEEGPAPVPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKG---NWLDLQYKE--DKLKPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 840
            EE++ L   A R R+   + +E   +E               +L++ E PA V  P     T     + + ++ WDQ ++ VKIYI+L GV Q   + ++  F + SFD+   ++ GK+Y      L + I  E S   VK   V+I+  K ++    ++L    KE  +K KP+ D E DP  G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct:   13 EEVKVLLEKATRKRVRDALTAEKSKIETEMKNKMQQKSQRKAELTENEKPAAVVAPITTGYT-----VKISNYGWDQSDKFVKIYITLPGVHQVPAESVQVNFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKAENTRWDYLTQVEKECKEKEKPSYDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 220          
BLAST of CN185221 vs. ExPASy Swiss-Prot
Match: CYBP_RAT (Calcyclin-binding protein OS=Rattus norvegicus GN=Cacybp PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.132e-21
Identity = 69/207 (33.33%), Postives = 112/207 (54.11%), Query Frame = -1
Query:  271 EELRQLRSIAKRPRIVSLINSEIHTLE-----KLSKEEGPAPV---PTPAKVSSTPALNY-ITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKG---NWLDLQYKE--DKLKPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 840
            EE++ L   + R R+   + +E   +E     K+ ++    P      PA V +     Y + + ++ WDQ ++ VKIYI+L GV Q   + ++  F + SFD+   ++ GKNY      L + I  E S   VK   V+I+  K ++    ++L    KE  +K KP+ D E DP  G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct:   13 EEVKVLLEKSTRKRLRDTLTNEKSKIETELRNKMQQKSQKKPEFDNEKPAAVVAPLTTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPAENVQVHFTERSFDLLVKNLNGKNYSMIVNNLLKPISVESSSKKVKTDTVIILCRKKAENTRWDYLTQVEKECKEKEKPSYDTEADPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 219          
BLAST of CN185221 vs. ExPASy Swiss-Prot
Match: CYBP_PONAB (Calcyclin-binding protein OS=Pongo abelii GN=CACYBP PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.523e-21
Identity = 68/213 (31.92%), Postives = 108/213 (50.70%), Query Frame = -1
Query:  271 EELRQLRSIAKRPRIVSLINSEIHTLE---------------KLSKEEGPAPVPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKGNWLDL-----QYKEDKLKPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 840
            EE++ L   A R R+   + +E   +E               +L   E PA V  P     T     + + ++ WDQ ++ VKIYI+L GV Q   + ++  F + SFD+   ++ GK+Y      L + I  E S   VK   V+I+  K  +    D      + +++K KP+ D E DP  G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct:   11 EEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAAVVAPITTGYT-----VKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKERKEKEKPSYDAETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 218          
BLAST of CN185221 vs. ExPASy Swiss-Prot
Match: CYBP_MACFA (Calcyclin-binding protein OS=Macaca fascicularis GN=CACYBP PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.523e-21
Identity = 70/213 (32.86%), Postives = 110/213 (51.64%), Query Frame = -1
Query:  271 EELRQLRSIAKRPRIVSLINSEIHTLE---------------KLSKEEGPAPVPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKA---SKGNWLDLQYKE--DKLKPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 840
            EE++ L   A R R+   + +E   +E               +L   E PA V  P     T     + + ++ WDQ ++ VKIYI+L GV Q   + ++  F + SFD+   ++ GK+Y      L + I  E S   VK   V+I+  K    ++ ++L    KE  +K KP+ D E DP  G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct:   11 EEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAAVVAPITTGYT-----VKISNYGWDQSDKFVKIYITLSGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEKEKPSYDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 218          
BLAST of CN185221 vs. ExPASy Swiss-Prot
Match: CYBP_HUMAN (Calcyclin-binding protein OS=Homo sapiens GN=CACYBP PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 3.295e-21
Identity = 70/213 (32.86%), Postives = 110/213 (51.64%), Query Frame = -1
Query:  271 EELRQLRSIAKRPRIVSLINSEIHTLE---------------KLSKEEGPAPVPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKA---SKGNWLDLQYKE--DKLKPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 840
            EE++ L   A R R+   + +E   +E               +L   E PA V  P     T     + + ++ WDQ ++ VKIYI+L GV Q   + ++  F + SFD+   ++ GK+Y      L + I  E S   VK   V+I+  K    ++ ++L    KE  +K KP+ D E DP  G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct:   11 EEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAAVVAPITTGYT-----VKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEKEKPSYDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 218          
The following BLAST results are available for this feature:
BLAST of CN185221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
CYBP_MOUSE5.083e-2233.49Calcyclin-binding protein OS=Mus musculus GN=Cacyb... [more]
CYBP_BOVIN6.639e-2232.86Calcyclin-binding protein OS=Bos taurus GN=CACYBP ... [more]
CYBP_RAT1.132e-2133.33Calcyclin-binding protein OS=Rattus norvegicus GN=... [more]
CYBP_PONAB2.523e-2131.92Calcyclin-binding protein OS=Pongo abelii GN=CACYB... [more]
CYBP_MACFA2.523e-2132.86Calcyclin-binding protein OS=Macaca fascicularis G... [more]
CYBP_HUMAN3.295e-2132.86Calcyclin-binding protein OS=Homo sapiens GN=CACYB... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0001A01_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185221 ID=CN185221; Name=CN185221; organism=Citrus sinensis; type=EST; length=855bp
GGGGGGGGGGGGGGGGGGGGATGGAGGGGCCCCGTGAATCCATAACAACC
CCAGCACAAGCTGCTTCCATCTTGAACAGGAAATGCCATTCCCAAATGGC
AGATACTTGTGACCGCAAGTTCGCAACATAAAATGCATGAAAATGACAGT
AATGGTAACTTCAGACAAAGGGAAGACCATACACAGAACATCACCATCTT
TGGGGAGTATCCGACTACATCTTTAGTTTATTTAGGGATATCCCTTCAGA
GGATCAGCTGTTTTACCAGATCTAGCATCTGTCCAAGCTTTTGCAATTGT
TCGCTTCATTTCGTCGTCACCTTCCTCGTACATATTCTTCATCAAATCCA
TAATTCCAGCCATAGGATCTCGTTCTTTATCCAGATTTGGCTTCAGCTTA
TCCTCTTTGTACTGTAAGTCTAACCAATTTCCCTTTGAAGCTTTAAAGAG
CATGATGACAACCCTTGTGGGTTTAACCAGCACCTTGCTTTTCTCAGGAA
CAATCTCCTGGTTCAACCTTGGGCTAGTAAACCGGTAATTCTTCCCTTGG
ACATCATGGAATTTGACATCAAAGGACCACTGCTTGAACTCTGCTTCCAT
TTTATCCTGGACTACTCCCTCTAAAGAAATATATATCTTGACTTTTTCAT
TATCCTGATCCCAGCTGAATGATCCAAGCGTAATATAGTTGAGTGCTGGA
GTAGAAGAGACCTTAGCTGGTGTTGGAACTGGAGCTGGACCTTCCTCTTT
TGACAACTTCTCCAAGGTATGAATCTCAGAGTTAATAAGAGAGACGATAC
GAGGTCGTTTTGCGATGCTCCGTAGTTGTCTTAGCTCTTCCCAAACCAGC
ACCAA
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