EG358206

Overview
NameEG358206
Unique NameEG358206
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length446
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig378 contig Csv1_Contig378:103..548. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EG358206 vs. ExPASy Swiss-Prot
Match: TRPD_ARATH (Anthranilate phosphoribosyltransferase, chloroplastic OS=Arabidopsis thaliana GN=PAT1 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 7.460e-26
Identity = 62/96 (64.58%), Postives = 78/96 (81.25%), Query Frame = 1 
Query:  157 TAIQTPQPAVSDNTRPLTPCFNELIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIV 444
            +A +   PA ++ +      FN+LI+ LI RVDL+E EA++SL++LLNEA+EALISAFLVLLRAKGET+ EIVGLARAM+K+A KVEGL DAVDIV
Sbjct:   88 SAAEALPPACANASPSSIKSFNQLIETLIDRVDLSETEAESSLEFLLNEANEALISAFLVLLRAKGETYEEIVGLARAMMKHARKVEGLVDAVDIV 183
[Close]
BLAST of EG358206 vs. ExPASy Swiss-Prot
Match: TRPD_ACIC1 (Anthranilate phosphoribosyltransferase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=trpD PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 8.853e-11
Identity = 36/80 (45.00%), Postives = 55/80 (68.75%), Query Frame = 1 
Query:  208 TPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIV 444
            TP + E++  L++R DLTEAEA  ++  +++ EA +A I+AF V LRAKGE+  E+ GL+  M+  A  V  +G+A+DIV
Sbjct:    5 TPSWPEVLSALLARRDLTEAEAAWAMHQIMSGEATDAQIAAFAVALRAKGESAEEVSGLSSVMLALAAPVPPIGEALDIV 84
The following BLAST results are available for this feature:
BLAST of EG358206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
TRPD_ARATH7.460e-2664.58Anthranilate phosphoribosyltransferase, chloroplas... [more]
TRPD_ACIC18.853e-1145.00Anthranilate phosphoribosyltransferase OS=Acidothe... [more]
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Properties
Property NameValue
Genbank description12a11 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl012a11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358206 ID=EG358206; Name=EG358206; organism=Citrus sinensis; type=EST; length=446bp
ACGCGGGGAACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTC
TTCCTCTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGT
CGCTTCGAAACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGA
GAATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCG
TCCTCTAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAG
TGGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAAT
GAAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAA
AGGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGT
ATGCTACGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGG
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