EG358205

Overview
NameEG358205
Unique NameEG358205
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length449
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig160 contig Csv1_Contig160:1307..1755. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358205 vs. ExPASy Swiss-Prot
Match: HUMS_ARATH (Alpha-humulene/(-)-(E)-beta-caryophyllene synthase OS=Arabidopsis thaliana GN=TPS21 PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 3.209e-24
Identity = 54/117 (46.15%), Postives = 79/117 (67.52%), Query Frame = 1
Query:   10 PKVVKAASVICRLMDDMQGHEFEQKRGHVASAIECYTKQHGVSKEEAIKMFEEEVANAWKDINEELMMKPTVVARPLLGTILNLARAIAFIYKEDDGYTHSYLIKDQIASVLGDHVP 360
            PK+  A+ +I R  DD+  +EFE KR HVA+ I+CY +Q GVSKE A+++    V++AWKD+N+EL M+P V   PLL  +LNL+R I   Y+  D YT+  L+K+ I S+L + +P
Sbjct:  431 PKIRVASEIISRFTDDISSYEFEHKREHVATGIDCYMQQFGVSKERAVEVMGNIVSDAWKDLNQEL-MRPHVFPFPLLMRVLNLSRVIDVFYRYQDAYTNPKLLKEHIVSLLIETIP 546          
BLAST of EG358205 vs. ExPASy Swiss-Prot
Match: DCS3_GOSAR ((+)-delta-cadinene synthase isozyme A OS=Gossypium arboreum GN=CAD1-A PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 3.209e-24
Identity = 54/117 (46.15%), Postives = 78/117 (66.67%), Query Frame = 1
Query:   10 PKVVKAASVICRLMDDMQGHEFEQKRGHVASAIECYTKQHGVSKEEAIKMFEEEVANAWKDINEELMMKPTVVARPLLGTILNLARAIAFIYKEDDGYTH-SYLIKDQIASVLGDHV 357
            PK++KA+++ICR MDD+  H+F  +R    SAIECY KQ+GV+ +EA   F + + ++WKD+NEE  +KPT +  P+L   LNLAR +  +Y+E DGYTH     K  I S+L D +
Sbjct:  438 PKIIKASTIICRFMDDIAEHKFNHRREDDCSAIECYMKQYGVTAQEAYNEFNKHIESSWKDVNEE-FLKPTEMPTPVLCRSLNLARVMDVLYREGDGYTHVGKAAKGGITSLLIDPI 553          
BLAST of EG358205 vs. ExPASy Swiss-Prot
Match: DCS4_GOSAR ((+)-delta-cadinene synthase isozyme C2 OS=Gossypium arboreum GN=CAD1-C2 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 5.123e-22
Identity = 46/100 (46.00%), Postives = 71/100 (71.00%), Query Frame = 1
Query:   10 PKVVKAASVICRLMDDMQGHEFEQKRGHVASAIECYTKQHGVSKEEAIKMFEEEVANAWKDINEELMMKPTVVARPLLGTILNLARAIAFIYKEDDGYTH 309
            PK+++A+++ICR MDD+  H+F+ +R    SAIECY +++GVS +EA  +F + V +AWKD+N+E   KPT +   +L   LNLAR +  +Y+E DGYT+
Sbjct:  437 PKIIQASTIICRFMDDVAEHKFKHRREDDCSAIECYMEEYGVSAQEAYDVFNKHVESAWKDVNQE-FQKPTEMPTEVLNRSLNLARVMDVLYREGDGYTY 535          
BLAST of EG358205 vs. ExPASy Swiss-Prot
Match: DCS2_GOSAR ((+)-delta-cadinene synthase isozyme XC14 OS=Gossypium arboreum PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 8.739e-22
Identity = 45/100 (45.00%), Postives = 72/100 (72.00%), Query Frame = 1
Query:   10 PKVVKAASVICRLMDDMQGHEFEQKRGHVASAIECYTKQHGVSKEEAIKMFEEEVANAWKDINEELMMKPTVVARPLLGTILNLARAIAFIYKEDDGYTH 309
            PK+++A+++ICR MDD+  H+F+ +R    SAIECY +++GV+ +EA  +F + V +AWKD+N+E  +KPT +   +L   LNLAR +  +Y+E DGYT+
Sbjct:  437 PKIIQASTIICRFMDDVAEHKFKHRREDDCSAIECYMEEYGVTAQEAYDVFNKHVESAWKDVNKE-FLKPTEMPTEVLNRSLNLARVMDVLYREGDGYTY 535          
BLAST of EG358205 vs. ExPASy Swiss-Prot
Match: DCS1_GOSAR ((+)-delta-cadinene synthase isozyme XC1 OS=Gossypium arboreum PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 8.739e-22
Identity = 45/100 (45.00%), Postives = 72/100 (72.00%), Query Frame = 1
Query:   10 PKVVKAASVICRLMDDMQGHEFEQKRGHVASAIECYTKQHGVSKEEAIKMFEEEVANAWKDINEELMMKPTVVARPLLGTILNLARAIAFIYKEDDGYTH 309
            PK+++A+++ICR MDD+  H+F+ +R    SAIECY +++GV+ +EA  +F + V +AWKD+N+E  +KPT +   +L   LNLAR +  +Y+E DGYT+
Sbjct:  437 PKIIQASTIICRFMDDVAEHKFKHRREDDCSAIECYMEEYGVTAQEAYDVFNKHVESAWKDLNQE-FLKPTEMPTEVLNRSLNLARVMDVLYREGDGYTY 535          
BLAST of EG358205 vs. ExPASy Swiss-Prot
Match: DCS1_GOSHI ((+)-delta-cadinene synthase OS=Gossypium hirsutum GN=CDN1 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 4.337e-21
Identity = 44/100 (44.00%), Postives = 71/100 (71.00%), Query Frame = 1
Query:   10 PKVVKAASVICRLMDDMQGHEFEQKRGHVASAIECYTKQHGVSKEEAIKMFEEEVANAWKDINEELMMKPTVVARPLLGTILNLARAIAFIYKEDDGYTH 309
            PK+++A+++ICR MDD+  H+F+ +R    SAIECY +++GV+ +EA  +F + V +AWKD+N+   +KPT +   +L   LNLAR +  +Y+E DGYT+
Sbjct:  437 PKIIQASTIICRFMDDVTEHKFKHRREDDCSAIECYMEEYGVTAQEAYDVFNKHVESAWKDVNQG-FLKPTEMPTEVLNRSLNLARVMDVLYREGDGYTY 535          
BLAST of EG358205 vs. ExPASy Swiss-Prot
Match: CASS_RICCO (Casbene synthase, chloroplastic OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.262e-20
Identity = 50/116 (43.10%), Postives = 71/116 (61.21%), Query Frame = 1
Query:   10 PKVVKAASVICRLMDDMQGHEFEQKRGHVASAIECYTKQHGVSKEEAIKMFEEEVANAWKDINEELMMKPTVVARPLLGTILNLARAIAFIYKEDDGYTHSYLIKDQIASVLGDHV 357
            PK+  A+    RL++D+  H  EQ+RGHVAS I+CY  QHGVSK+EA+K+ ++   + WK+INEE M +  V    L+  I+NLAR     YK  DGYT S  +K  +  +  D +
Sbjct:  485 PKLSYASGAFIRLVNDLTSHVTEQQRGHVASCIDCYMNQHGVSKDEAVKILQKMATDCWKEINEECMRQSQVSVGHLM-RIVNLARLTDVSYKYGDGYTDSQQLKQFVKGLFVDPI 599          
BLAST of EG358205 vs. ExPASy Swiss-Prot
Match: 5EAS_TOBAC (Aristolochene synthase OS=Nicotiana tabacum GN=EAS3 PE=1 SV=3)

HSP 1 Score: 94.7449 bits (234), Expect = 1.822e-19
Identity = 49/118 (41.53%), Postives = 76/118 (64.41%), Query Frame = 1
Query:   10 PKVVKAASVICRLMDDMQGHEFEQKRGHVASAIECYTKQHGVSKEEAIKMFEEEVANAWKDINEELMMKPTVVARPLLGTILNLARAIAFIYKED-DGYTH-SYLIKDQIASVLGDHV 357
            PK+++A+ +ICR++DD   +E E+ RG +A+ IEC  + +G+S +EA+  F+     AWKDINE L ++PT V+   L  ILNLAR +   Y  + DGYTH   ++K  I ++L D +
Sbjct:  430 PKILEASVIICRVIDDTATYEVEKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEGL-LRPTPVSTEFLTPILNLARIVEVTYIHNLDGYTHPEKVLKPHIINLLVDSI 546          
BLAST of EG358205 vs. ExPASy Swiss-Prot
Match: ECS1_ARTAN (Epi-cedrol synthase OS=Artemisia annua GN=ECS1 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.227e-17
Identity = 41/100 (41.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query:   10 PKVVKAASVICRLMDDMQGHEFEQKRGHVASAIECYTKQHGVSKEEAIKMFEEEVANAWKDINEELMMKPTVVARPLLGTILNLARAIAFIYKEDDGYTH 309
            P +V A  ++CR MDD+  H+ EQ R HVAS IECY KQ   S+++A +   ++V +AWK+IN E M+    V   +   +LN +R++  +YK  D +TH
Sbjct:  429 PPLVNACCLLCRTMDDLGSHKGEQDRKHVASTIECYMKQFDASEQQAYESLNKKVEDAWKEINREFMITCKDVNIHVAMRVLNFSRSVDVLYKNKDHFTH 528          
BLAST of EG358205 vs. ExPASy Swiss-Prot
Match: BARS_ARATH (Alpha-barbatene synthase OS=Arabidopsis thaliana GN=BS PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 8.198e-12
Identity = 37/100 (37.00%), Postives = 59/100 (59.00%), Query Frame = 1
Query:   10 PKVVKAASVICRLMDDMQGHEFEQKRGHVASAIECYTKQHGVSKEEAIKMFEEEVANAWKDINEELMMKPTVVARPLLGTILNLARAIAFIYKEDDGYTH 309
            PK+V+      RLMDD+   E + ++G+ A+A+  Y  +HGV+KEEA +  E+   +  K +NEE  +K T + R +L   +N AR++  +Y  DD Y H
Sbjct:  440 PKLVRILGAKTRLMDDIADFEEDMEKGYTANALNYYMNEHGVTKEEASRELEKMNGDMNKIVNEE-CLKITTMPRRILMQSVNYARSLDVLYTADDVYNH 538          
The following BLAST results are available for this feature:
BLAST of EG358205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
HUMS_ARATH3.209e-2446.15Alpha-humulene/(-)-(E)-beta-caryophyllene synthase... [more]
DCS3_GOSAR3.209e-2446.15(+)-delta-cadinene synthase isozyme A OS=Gossypium... [more]
DCS4_GOSAR5.123e-2246.00(+)-delta-cadinene synthase isozyme C2 OS=Gossypiu... [more]
DCS2_GOSAR8.739e-2245.00(+)-delta-cadinene synthase isozyme XC14 OS=Gossyp... [more]
DCS1_GOSAR8.739e-2245.00(+)-delta-cadinene synthase isozyme XC1 OS=Gossypi... [more]
DCS1_GOSHI4.337e-2144.00(+)-delta-cadinene synthase OS=Gossypium hirsutum ... [more]
CASS_RICCO1.262e-2043.10Casbene synthase, chloroplastic OS=Ricinus communi... [more]
5EAS_TOBAC1.822e-1941.53Aristolochene synthase OS=Nicotiana tabacum GN=EAS... [more]
ECS1_ARTAN2.227e-1741.00Epi-cedrol synthase OS=Artemisia annua GN=ECS1 PE=... [more]
BARS_ARATH8.198e-1237.00Alpha-barbatene synthase OS=Arabidopsis thaliana G... [more]

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Properties
Property NameValue
Genbank description6e1 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0006e1, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358205 ID=EG358205; Name=EG358205; organism=Citrus sinensis; type=EST; length=449bp
ACGCGGGTCCCTAAGGTTGTAAAAGCAGCATCAGTTATCTGCAGACTCAT
GGATGACATGCAAGGTCATGAGTTTGAGCAGAAGAGAGGACATGTTGCGT
CAGCTATTGAATGTTACACGAAGCAGCATGGTGTCTCTAAGGAAGAGGCA
ATTAAAATGTTTGAAGAAGAAGTTGCAAATGCATGGAAAGATATTAACGA
GGAGTTGATGATGAAGCCAACCGTCGTTGCCCGACCACTGCTCGGGACGA
TTCTTAATCTTGCTCGTGCAATTGCTTTTATTTACAAAGAGGACGACGGC
TATACGCATTCTTACCTAATTAAAGATCAAATTGCTTCTGTGCTAGGAGA
CCACGTTCCATTTTGACAACTAGTTCTATACTTCTATTAATAATATTTTC
AGTTCCTTGGTTTGTGTTTGAAGGAAATACGGTGTATCGTATTGGTCTG
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