EY659313

Overview
NameEY659313
Unique NameEY659313
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8125 contig Csv1_Contig8125:1046..1741. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY659313 vs. ExPASy Swiss-Prot
Match: TECR_DICDI (Trans-2,3-enoyl-CoA reductase OS=Dictyostelium discoideum GN=gpsn2 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.788e-13
Identity = 48/164 (29.27%), Postives = 81/164 (49.39%), Query Frame = 2 
Query:   44 GMLFLYTPSFLAGLASFWLFPHEGFRFMLLTSALTVHFFKRIVEVLFIHKYSSGMVLDSAIVISLSYLISTAAMI--YVQSEGLGEPTIDLKFLGMILFLLGISGNFYHHNLLSKMRRNGEKEYKIPTSGLFDKVVCPHYLFEILXFWGIFFIAQTLYAFCYAI 529
            G LF+Y   +      +     + F   +     ++H+ KRI E +F+H++S G +    +  + SY     AM+  +V      E  I+  +LG+ L+++G   N+  H  L  +R  G  E KIP   LF+ V CP+Y  EIL + G   + QTL ++ +A+
Sbjct:  100 GPLFVYPIFYFLSNLIYGTDSPKSFAQKVALVCYSLHYIKRIYETIFVHRFSHGTMPIFNLFKNCSYYWGCTAMVSYFVNHPLYTEAPIERVYLGLGLWIIGEVFNYICHIQLRNLRPAGSTERKIPRGLLFEFVSCPNYTVEILSWIGFSILTQTLTSWIFAL 263
The following BLAST results are available for this feature:
BLAST of EY659313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TECR_DICDI1.788e-1329.27Trans-2,3-enoyl-CoA reductase OS=Dictyostelium dis... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-G05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659313 ID=EY659313; Name=EY659313; organism=Citrus sinensis; type=EST; length=696bp
CAAATCTTCAAACAACAAGGAGATTAAACTTTCAGCCAAAACCGGCATGC
TTTTTCTTTATACGCCATCGTTTCTTGCGGGTCTTGCTTCATTTTGGCTT
TTCCCTCATGAGGGCTTCCGATTTATGTTGCTCACTTCTGCTCTAACTGT
TCATTTCTTCAAAAGAATCGTTGAGGTGTTGTTCATTCATAAATATAGTA
GCGGGATGGTTCTTGATTCTGCAATCGTTATCAGTCTAAGTTATTTGATA
AGCACCGCAGCAATGATATATGTTCAAAGTGAAGGATTAGGAGAGCCAAC
TATTGATTTGAAGTTTTTGGGGATGATTCTATTTTTGTTGGGAATAAGCG
GCAATTTCTACCACCACAATCTGCTTTCAAAAATGAGAAGAAACGGTGAA
AAAGAATACAAGATTCCCACGAGTGGTTTATTTGATAAAGTTGTATGCCC
CCATTACTTGTTTGAGATATTANGGTTTTGGGGCATCTTTTTCATTGCTC
AAACTCTGTATGCATTTTGCTATGCTATAGGTGTAACTTTTTACTTAATG
GGAAGAAGCTATGCCACTAGGGCATGGTATCTTTCCAAATTTGAAGACTT
NCCCCAACATGTCAACTNCATTTTTCCATATATTTTTTAGAAAGGAAAGA
AATTACTTNCCATAAAAATTGAATTCTTCTGAGTTGCNNNNNNNAA
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