CN188904
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188904 vs. ExPASy Swiss-Prot
Match: CCC11_ARATH (Cyclin-C1-1 OS=Arabidopsis thaliana GN=CYCC1-1 PE=2 SV=2) HSP 1 Score: 179.874 bits (455), Expect = 1.080e-44 Identity = 82/109 (75.23%), Postives = 98/109 (89.91%), Query Frame = -2 Query: 346 VFHPYRSLVQFLQDAGMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDMNVVKNISMEILDFYENQRLVSEERINAAFGKLALK 672 VFHPYRSL +FLQDA +ND+NM ++WGI+NDTYKMDLILVHPP+ IALACIYIASV+REKD TAWFE+L DMN+VKNI+MEILDFYEN R ++EE++N+AF KLALK Sbjct: 144 VFHPYRSLSEFLQDAALNDVNMNQITWGIVNDTYKMDLILVHPPYRIALACIYIASVHREKDITAWFEDLHEDMNLVKNIAMEILDFYENYRTITEEKVNSAFSKLALK 252
BLAST of CN188904 vs. ExPASy Swiss-Prot
Match: CCC12_ARATH (Cyclin-C1-2 OS=Arabidopsis thaliana GN=CYCC1-2 PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 9.144e-44 Identity = 80/107 (74.77%), Postives = 96/107 (89.72%), Query Frame = -2 Query: 352 VFHPYRSLVQFLQDAGMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDMNVVKNISMEILDFYENQRLVSEERINAAFGKLA 672 VFHPYRSL +FLQD+G+ND +MTHL+WG++NDTY+MDLIL+HPP LI LACIYIASV++EKD WFEEL VDMN+VKNI+MEILDFYEN RL +EER++AAF KLA Sbjct: 144 VFHPYRSLPEFLQDSGINDTSMTHLTWGLVNDTYRMDLILIHPPFLITLACIYIASVHKEKDIKTWFEELSVDMNIVKNIAMEILDFYENHRLFTEERVHAAFNKLA 250
BLAST of CN188904 vs. ExPASy Swiss-Prot
Match: CCC11_ORYSJ (Cyclin-C1-1 OS=Oryza sativa subsp. japonica GN=Os09g0504400 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.483e-35 Identity = 73/114 (64.04%), Postives = 89/114 (78.07%), Query Frame = -2 Query: 346 VFHPYRSLVQFLQDAGMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDMNVVKNISMEILDFYEN-----QRLVSEERINAAFGKLALK 672 V+HPYR L+Q LQDAG+ D+ T +WGI+NDTYKMDLIL+HPP++IALACIYIASV ++KD T WFEELRVDMN+VKNISMEILDFY+ QR + E++I KL K Sbjct: 145 VYHPYRPLLQLLQDAGITDL--TQFAWGIVNDTYKMDLILIHPPYMIALACIYIASVLKDKDITLWFEELRVDMNIVKNISMEILDFYDTYKIDPQRGLPEDKIAPVMNKLPSK 256
BLAST of CN188904 vs. ExPASy Swiss-Prot
Match: CCNC_RAT (Cyclin-C OS=Rattus norvegicus GN=Ccnc PE=2 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 7.050e-20 Identity = 45/98 (45.92%), Postives = 65/98 (66.33%), Query Frame = -2 Query: 379 VFHPYRSLVQFLQDAGMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDMNVVKNISMEILDFYENQRLVSEER 672 V+HPYR L+Q++QD G D+ + L+W I+NDTY+ DL L++PP +IALAC+++A V ++KD WF EL VDM + I IL YE + E + Sbjct: 147 VYHPYRPLLQYVQDMGQEDV-LLPLAWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLYEQWKNFDERK 243
BLAST of CN188904 vs. ExPASy Swiss-Prot
Match: CCNC_MOUSE (Cyclin-C OS=Mus musculus GN=Ccnc PE=2 SV=3) HSP 1 Score: 97.4413 bits (241), Expect = 7.050e-20 Identity = 45/98 (45.92%), Postives = 65/98 (66.33%), Query Frame = -2 Query: 379 VFHPYRSLVQFLQDAGMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDMNVVKNISMEILDFYENQRLVSEER 672 V+HPYR L+Q++QD G D+ + L+W I+NDTY+ DL L++PP +IALAC+++A V ++KD WF EL VDM + I IL YE + E + Sbjct: 152 VYHPYRPLLQYVQDMGQEDV-LLPLAWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLYEQWKNFDERK 248
BLAST of CN188904 vs. ExPASy Swiss-Prot
Match: CCNC_XENTR (Cyclin-C OS=Xenopus tropicalis GN=ccnc PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.203e-19 Identity = 45/98 (45.92%), Postives = 65/98 (66.33%), Query Frame = -2 Query: 379 VFHPYRSLVQFLQDAGMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDMNVVKNISMEILDFYENQRLVSEER 672 V+HPYR L+Q++QD G D+ + L+W I+NDTY+ DL L++PP +IALAC+++A V ++KD WF EL VDM + I IL YE + E + Sbjct: 152 VYHPYRPLLQYVQDMGQEDM-LLPLAWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLYEQWKNFDERK 248
BLAST of CN188904 vs. ExPASy Swiss-Prot
Match: CCNC_XENLA (Cyclin-C OS=Xenopus laevis GN=ccnc PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.203e-19 Identity = 45/98 (45.92%), Postives = 65/98 (66.33%), Query Frame = -2 Query: 379 VFHPYRSLVQFLQDAGMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDMNVVKNISMEILDFYENQRLVSEER 672 V+HPYR L+Q++QD G D+ + L+W I+NDTY+ DL L++PP +IALAC+++A V ++KD WF EL VDM + I IL YE + E + Sbjct: 152 VYHPYRPLLQYVQDMGQEDM-LLPLAWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLYEQWKNFDERK 248
BLAST of CN188904 vs. ExPASy Swiss-Prot
Match: CCNC_HUMAN (Cyclin-C OS=Homo sapiens GN=CCNC PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.203e-19 Identity = 45/98 (45.92%), Postives = 65/98 (66.33%), Query Frame = -2 Query: 379 VFHPYRSLVQFLQDAGMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDMNVVKNISMEILDFYENQRLVSEER 672 V+HPYR L+Q++QD G D+ + L+W I+NDTY+ DL L++PP +IALAC+++A V ++KD WF EL VDM + I IL YE + E + Sbjct: 152 VYHPYRPLLQYVQDMGQEDM-LLPLAWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLYEQWKNFDERK 248
BLAST of CN188904 vs. ExPASy Swiss-Prot
Match: CCNC_CHICK (Cyclin-C OS=Gallus gallus GN=CCNC PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.203e-19 Identity = 45/98 (45.92%), Postives = 65/98 (66.33%), Query Frame = -2 Query: 379 VFHPYRSLVQFLQDAGMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDMNVVKNISMEILDFYENQRLVSEER 672 V+HPYR L+Q++QD G D+ + L+W I+NDTY+ DL L++PP +IALAC+++A V ++KD WF EL VDM + I IL YE + E + Sbjct: 152 VYHPYRPLLQYVQDMGQEDM-LLPLAWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLYEQWKNFDERK 248
BLAST of CN188904 vs. ExPASy Swiss-Prot
Match: CCNC_BOVIN (Cyclin-C OS=Bos taurus GN=CCNC PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.203e-19 Identity = 45/98 (45.92%), Postives = 65/98 (66.33%), Query Frame = -2 Query: 379 VFHPYRSLVQFLQDAGMNDINMTHLSWGILNDTYKMDLILVHPPHLIALACIYIASVYREKDNTAWFEELRVDMNVVKNISMEILDFYENQRLVSEER 672 V+HPYR L+Q++QD G D+ + L+W I+NDTY+ DL L++PP +IALAC+++A V ++KD WF EL VDM + I IL YE + E + Sbjct: 152 VYHPYRPLLQYVQDMGQEDM-LLPLAWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLYEQWKNFDERK 248 The following BLAST results are available for this feature:
BLAST of CN188904 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188904 ID=CN188904; Name=CN188904; organism=Citrus sinensis; type=EST; length=673bpback to top |