CX300692
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300692 vs. ExPASy Swiss-Prot
Match: RL24_PRUAV (60S ribosomal protein L24 OS=Prunus avium GN=RPL24 PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 5.537e-62 Identity = 117/121 (96.69%), Postives = 119/121 (98.35%), Query Frame = 2 Query: 41 MVLKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKK 403 MVLKTELC+FSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIA EAVKK+RR TKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKK Sbjct: 1 MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKK 121
BLAST of CX300692 vs. ExPASy Swiss-Prot
Match: RL24_CICAR (60S ribosomal protein L24 OS=Cicer arietinum GN=RPL24 PE=2 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 8.839e-60 Identity = 112/121 (92.56%), Postives = 117/121 (96.69%), Query Frame = 2 Query: 41 MVLKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKK 403 MVLKTELC+FSGAKIYPG+GIRFIR DSQVFLF NSKCKRYFHNRLKPSKLTWTAM+RKQHKKD A EAVKK+RRATKKPYSRSIVGATLEVIQK+RTEKPEVRDAAREAALREIKERIKK Sbjct: 1 MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIKK 121
BLAST of CX300692 vs. ExPASy Swiss-Prot
Match: RL24_HORVU (60S ribosomal protein L24 OS=Hordeum vulgare GN=RPL24 PE=2 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 7.483e-59 Identity = 111/121 (91.74%), Postives = 115/121 (95.04%), Query Frame = 2 Query: 41 MVLKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKK 403 MVLKTELC+FSG KIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKP+KL WTAMYRKQHKKDI AEA KK+RR TKKPYSRSIVGATLEVIQK+R EKPEVRDAAREAALREIKERIKK Sbjct: 1 MVLKTELCRFSGQKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPAKLCWTAMYRKQHKKDIHAEAAKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIKK 121
BLAST of CX300692 vs. ExPASy Swiss-Prot
Match: RL242_ARATH (60S ribosomal protein L24-2 OS=Arabidopsis thaliana GN=RPL24B PE=2 SV=2) HSP 1 Score: 223.016 bits (567), Expect = 3.714e-58 Identity = 109/121 (90.08%), Postives = 115/121 (95.04%), Query Frame = 2 Query: 41 MVLKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKK 403 MVLKTELC+FSG KIYPG+GIRFIRSDSQVFLF NSKCKRYFHN+LKPSKL WTAMYRKQHKKD A EAVK++RRATKKPYSRSIVGATLEVIQK+R EKPEVRDAAREAALREIKERIKK Sbjct: 1 MVLKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLAWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIKK 121
BLAST of CX300692 vs. ExPASy Swiss-Prot
Match: RL241_ARATH (60S ribosomal protein L24-1 OS=Arabidopsis thaliana GN=RPL24A PE=1 SV=2) HSP 1 Score: 222.631 bits (566), Expect = 4.850e-58 Identity = 109/121 (90.08%), Postives = 115/121 (95.04%), Query Frame = 2 Query: 41 MVLKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKK 403 MVLKTELC+FSG KIYPG+GIRFIRSDSQVFLF NSKCKRYFHN+LKPSKL WTAMYRKQHKKD A EAVK++RRATKKPYSRSIVGATLEVIQK+R EKPEVRDAAREAALREIKERIKK Sbjct: 1 MVLKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLCWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIKK 121
BLAST of CX300692 vs. ExPASy Swiss-Prot
Match: RL24B_SCHPO (60S ribosomal protein L24-B OS=Schizosaccharomyces pombe GN=rpl24b PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.522e-27 Identity = 57/116 (49.14%), Postives = 82/116 (70.69%), Query Frame = 2 Query: 47 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKER 394 +K E+C FSG+K+YPG G F+R D++VF F N K + F R P +L+WT +YR+ HKK I+ E KK+ R T K + R IVGA L+VI+++R ++PEVR AAR AAL++ K++ Sbjct: 1 MKVEVCSFSGSKVYPGAGRLFVRGDNKVFRFVNKKSESLFLQRKNPRRLSWTVLYRRMHKKGISEEHAKKRTRRTVK-HQRGIVGANLDVIKEKRNQRPEVRAAARAAALKQRKDK 115
BLAST of CX300692 vs. ExPASy Swiss-Prot
Match: RL24A_SCHPO (60S ribosomal protein L24-A OS=Schizosaccharomyces pombe GN=rpl24a PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.522e-27 Identity = 57/116 (49.14%), Postives = 82/116 (70.69%), Query Frame = 2 Query: 47 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKER 394 +K E+C FSG+K+YPG G F+R D++VF F N K + F R P +L+WT +YR+ HKK I+ E KK+ R T K + R IVGA L+VI+++R ++PEVR AAR AAL++ K++ Sbjct: 1 MKVEVCSFSGSKVYPGAGRLFVRGDNKVFRFVNKKSESLFLQRKNPRRLSWTVLYRRMHKKGISEEHAKKRTRRTVK-HQRGIVGANLDVIKEKRNQRPEVRAAARAAALKQRKDK 115
BLAST of CX300692 vs. ExPASy Swiss-Prot
Match: RL24_DEBHA (60S ribosomal protein L24 OS=Debaryomyces hansenii GN=RPL24 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 7.553e-27 Identity = 58/118 (49.15%), Postives = 82/118 (69.49%), Query Frame = 2 Query: 47 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIK 400 +K EL FSG KIYPG+G F+R DS++F F +SK FH R P +++WT +YR+QHKK I+ E+ K++ R T K R+IVGA+LE+I++RR++KP R AAR+ L + KE K Sbjct: 1 MKVELDSFSGTKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRISWTVLYRRQHKKGISEESAKRRTRKTVK-NQRAIVGASLELIKERRSQKPSDRKAARDVKLAKDKEAKK 117
BLAST of CX300692 vs. ExPASy Swiss-Prot
Match: RL24_ASHGO (60S ribosomal protein L24 OS=Ashbya gossypii GN=RPL24 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.197e-26 Identity = 57/118 (48.31%), Postives = 79/118 (66.95%), Query Frame = 2 Query: 47 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIK 400 +K E+ FSGAKIYPG+G F+R DS+VF F +SK FH R P ++ WT +YR+ HKK I E KK+ R T K R++VGA+LE+I++RR+ KPE+R A R+ + KE+ K Sbjct: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKVFRFHSSKSASLFHQRKNPRRIAWTVLYRRHHKKGITEEVAKKRSRKTVKA-QRAVVGASLELIKERRSLKPEIRKAKRDEKAKADKEKKK 117
BLAST of CX300692 vs. ExPASy Swiss-Prot
Match: RL24_DICDI (60S ribosomal protein L24 OS=Dictyostelium discoideum GN=rpl24 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 4.896e-26 Identity = 57/118 (48.31%), Postives = 81/118 (68.64%), Query Frame = 2 Query: 47 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIK 400 +KT LC +S KIYP +G++F+R DS+VF F N+K + F ++ P + W+ +YR+ +K + KKK R TKK R+IVGA+LEVIQ++R +KPEV+ AA E A REIKE+ K Sbjct: 1 MKTSLCNYSEFKIYPARGMKFVRGDSKVFHFINTKVESLFFRKINPRDIRWSMVYRRIYKNTTTDVSAKKKARKTKK-VERNIVGASLEVIQQKRAQKPEVKQAAAEQAKREIKEKKK 117 The following BLAST results are available for this feature:
BLAST of CX300692 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300692 ID=CX300692; Name=CX300692; organism=Citrus sinensis; type=EST; length=404bpback to top |