CK938358

Overview
NameCK938358
Unique NameCK938358
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length433
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2614 contig Csv1_Contig2614:254..687. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938358 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 8.254e-11
Identity = 28/49 (57.14%), Postives = 35/49 (71.43%), Query Frame = 2
Query:    5 KKGSXXAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCACG 151
            KKGS   AD +ET+ S ++  VVMD  AAE +G CKCGP+C+C NC CG
Sbjct:   18 KKGSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64          
The following BLAST results are available for this feature:
BLAST of CK938358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MT3_CARPA8.254e-1157.14Metallothionein-like protein type 3 OS=Carica papa... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004443_G03 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IVF_G03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938358 ID=CK938358; Name=CK938358; organism=Citrus sinensis; type=EST; length=433bp
GGGGAAGAAGGGAAGCAGNNNTGCTGCTGACTTCGTCGAGACTGACTTGA
GCTTTGTCAGCACCGTTGTTGTCATGGACGTTCAGGCTGCTGAGACTGAA
GGTAACTGCAAGTGCGGCCCCACCTGCGCTTGTGTGAACTGCGCTTGTGG
TAGTCACTAATAAGCAAACACATGCAGCAAAAAATAAGAAGCTGCAAGTG
TGCCTAAATATTGTGGGGGTTAAGAATAATGTAAGGGTGATTAAAAAAAA
AGAAAAATTCTCTACTTCGTTTTTATGATGGTCTACTACTAGTGTGTGGA
GTGATGTGCGTGTTGTGTCACCCATCACTCGTAATGTTTTGTGTTTCCTT
CTTCATAATCATGTAATATATGGCCATGGCCATGACCGTGGCCTTGTGTG
GTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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