CK936487

Overview
NameCK936487
Unique NameCK936487
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1264 contig Csv1_Contig1264:224..930. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK936487 vs. ExPASy Swiss-Prot
Match: SUT_SPIOL (Sucrose transport protein OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.111e-37
Identity = 79/113 (69.91%), Postives = 92/113 (81.42%), Query Frame = 1
Query:    4 PPPVGVKVGALAIFTVLGIPQAITFSVPFAMASIFSRTSAAGQGLSLGVLNLAIVVPQMLVSLLSGPFDAVCGGGNMPAFMVGAVAAALSGIVALTLLPSTTADVPPPITEAG 342
            PPP GVK GALAIF VLGIP AITFS+PFA+ASIFS +S +GQGLSLGVLNLAIVVPQM VS+ SGP+DA+ GGGN+PAF+VGAVAA  S +++ TLLPS     PPP  + G
Sbjct:  412 PPPAGVKGGALAIFAVLGIPLAITFSIPFALASIFSASSGSGQGLSLGVLNLAIVVPQMFVSVTSGPWDAMFGGGNLPAFVVGAVAATASAVLSFTLLPS-----PPPEAKIG 519          
BLAST of CK936487 vs. ExPASy Swiss-Prot
Match: SUC1_ARATH (Sucrose transport protein SUC1 OS=Arabidopsis thaliana GN=SUC1 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.462e-36
Identity = 76/112 (67.86%), Postives = 89/112 (79.46%), Query Frame = 1
Query:    7 PPVGVKVGALAIFTVLGIPQAITFSVPFAMASIFSRTSAAGQGLSLGVLNLAIVVPQMLVSLLSGPFDAVCGGGNMPAFMVGAVAAALSGIVALTLLPSTTADVPPPITEAG 342
            P   VK GAL++F VLGIP AITFS PFA+ASIFS  S AGQGLSLGVLNLAIV+PQM+VSL  GPFDA+ GGGN+PAF+V A+AAA+SG++ALT+LPS   D P   T  G
Sbjct:  400 PSASVKAGALSLFAVLGIPLAITFSTPFALASIFSSCSGAGQGLSLGVLNLAIVIPQMIVSLGGGPFDALFGGGNLPAFIVAAIAAAISGVLALTVLPSPPPDAPKATTMGG 511          
BLAST of CK936487 vs. ExPASy Swiss-Prot
Match: SUC2_ARATH (Sucrose transport protein SUC2 OS=Arabidopsis thaliana GN=SUC2 PE=1 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 1.718e-35
Identity = 72/105 (68.57%), Postives = 88/105 (83.81%), Query Frame = 1
Query:    7 PPVGVKVGALAIFTVLGIPQAITFSVPFAMASIFSRTSAAGQGLSLGVLNLAIVVPQMLVSLLSGPFDAVCGGGNMPAFMVGAVAAALSGIVALTLLPSTTADVP 321
            PP  V  GAL +F +LGIPQAITFS+PFA+ASIFS  S AGQGLSLGVLNLAIVVPQM++S+  GPFD + GGGN+PAF++GA+AAA+SG++ALT+LPS   D P
Sbjct:  399 PPGNVTAGALTLFAILGIPQAITFSIPFALASIFSTNSGAGQGLSLGVLNLAIVVPQMVISVGGGPFDELFGGGNIPAFVLGAIAAAVSGVLALTVLPSPPPDAP 503          
BLAST of CK936487 vs. ExPASy Swiss-Prot
Match: SUC5_ARATH (Sucrose transport protein SUC5 OS=Arabidopsis thaliana GN=SUC5 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.240e-34
Identity = 69/105 (65.71%), Postives = 86/105 (81.90%), Query Frame = 1
Query:    7 PPVGVKVGALAIFTVLGIPQAITFSVPFAMASIFSRTSAAGQGLSLGVLNLAIVVPQMLVSLLSGPFDAVCGGGNMPAFMVGAVAAALSGIVALTLLPSTTADVP 321
            P  G+K G  ++FTVLGIP AIT+S+PFA+ASIFS  S AGQGLSLGVLN+AI +PQM+VS  SGP DA  GGGN+P+F+VGA+AAA+SG++ALT+LPS   D P
Sbjct:  399 PSSGIKAGVFSLFTVLGIPLAITYSIPFALASIFSTNSGAGQGLSLGVLNIAICIPQMIVSFSSGPLDAQFGGGNLPSFVVGAIAAAVSGVLALTVLPSPPPDAP 503          
BLAST of CK936487 vs. ExPASy Swiss-Prot
Match: SUC8_ARATH (Sucrose transport protein SUC8 OS=Arabidopsis thaliana GN=SUC8 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.471e-31
Identity = 64/98 (65.31%), Postives = 81/98 (82.65%), Query Frame = 1
Query:    7 PPVGVKVGALAIFTVLGIPQAITFSVPFAMASIFSRTSAAGQGLSLGVLNLAIVVPQMLVSLLSGPFDAVCGGGNMPAFMVGAVAAALSGIVALTLLP 300
            P  G++ GAL +F +LGIP AITFS+PFA+ASI S +S AGQGLSLGVLN+AIV+PQM+VS   GP DA+ GGGN+P F+VGA+AAA+S +VA T+LP
Sbjct:  395 PTDGIRAGALTLFALLGIPLAITFSIPFALASIISSSSGAGQGLSLGVLNMAIVIPQMIVSFGVGPIDALFGGGNLPRFVVGAIAAAISSVVAFTVLP 492          
BLAST of CK936487 vs. ExPASy Swiss-Prot
Match: SUC9_ARATH (Sucrose transport protein SUC9 OS=Arabidopsis thaliana GN=SUC9 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.708e-30
Identity = 63/98 (64.29%), Postives = 81/98 (82.65%), Query Frame = 1
Query:    7 PPVGVKVGALAIFTVLGIPQAITFSVPFAMASIFSRTSAAGQGLSLGVLNLAIVVPQMLVSLLSGPFDAVCGGGNMPAFMVGAVAAALSGIVALTLLP 300
            P   ++ GAL++F +LGIP AITFS+PFA+ASI S +S AGQGLSLGVLN+AIV+PQM+VS   GP DA+ GGGN+P F+VGA+AA +S +VALT+LP
Sbjct:  394 PTNAIRDGALSLFAILGIPLAITFSIPFALASIISSSSGAGQGLSLGVLNMAIVIPQMIVSFGVGPIDALFGGGNLPGFVVGAIAALISSVVALTVLP 491          
BLAST of CK936487 vs. ExPASy Swiss-Prot
Match: SUC6_ARATH (Putative sucrose transport protein SUC6 OS=Arabidopsis thaliana GN=SUC6 PE=5 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 6.324e-30
Identity = 62/98 (63.27%), Postives = 80/98 (81.63%), Query Frame = 1
Query:    7 PPVGVKVGALAIFTVLGIPQAITFSVPFAMASIFSRTSAAGQGLSLGVLNLAIVVPQMLVSLLSGPFDAVCGGGNMPAFMVGAVAAALSGIVALTLLP 300
            P  G++ GAL +F +LGIP AITFS+PFA+ASI S +S AGQGLSLGVLN+ IV+PQM+VS   GP DA+ GGGN+P F+VGA+AAA+S +VA ++LP
Sbjct:  395 PTDGIRAGALTLFALLGIPLAITFSIPFALASIISSSSGAGQGLSLGVLNMTIVIPQMVVSFGVGPIDALFGGGNLPGFVVGAIAAAISSVVAFSVLP 492          
BLAST of CK936487 vs. ExPASy Swiss-Prot
Match: SUC7_ARATH (Putative sucrose transport protein SUC7 OS=Arabidopsis thaliana GN=SUC7 PE=5 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 3.139e-29
Identity = 63/98 (64.29%), Postives = 79/98 (80.61%), Query Frame = 1
Query:    7 PPVGVKVGALAIFTVLGIPQAITFSVPFAMASIFSRTSAAGQGLSLGVLNLAIVVPQMLVSLLSGPFDAVCGGGNMPAFMVGAVAAALSGIVALTLLP 300
            P  G++ GAL +F +LGIP AITFS+PFA+ASI S +S AGQ LSLGVLN+AIV+PQM+VS   GP DA+ G GN+P F+VGA+AAA+S IVA T+LP
Sbjct:  394 PTDGIRAGALTLFALLGIPLAITFSIPFALASIISSSSGAGQRLSLGVLNMAIVIPQMIVSFGVGPIDALFGDGNLPGFVVGAIAAAVSSIVAFTVLP 491          
BLAST of CK936487 vs. ExPASy Swiss-Prot
Match: SUC4_ARATH (Sucrose transport protein SUC4 OS=Arabidopsis thaliana GN=SUC4 PE=1 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 5.540e-26
Identity = 59/108 (54.63%), Postives = 75/108 (69.44%), Query Frame = 1
Query:    7 PPVGVKVGALAIFTVLGIPQAITFSVPFAMASIFSRTSAAGQGLSLGVLNLAIVVPQMLVSLLSGPFDAVCGGGNMPAFMVGAVAAALSGIVALTLLPSTTADVPPPI 330
            PP  +   A+ IFT+LGIP AIT+SVP+A+ SI   +   GQGLSLGVLNLAIV+PQ++VS+ SGP+D + GGGN PA  VGA    + GIVA+  LP T    P P+
Sbjct:  402 PPASIVFAAVLIFTILGIPLAITYSVPYALISIRIESLGLGQGLSLGVLNLAIVIPQVIVSVGSGPWDQLFGGGNSPALAVGAATGFIGGIVAILALPRTRIQKPIPL 509          
BLAST of CK936487 vs. ExPASy Swiss-Prot
Match: SUT2_ORYSJ (Sucrose transport protein 2 OS=Oryza sativa subsp. japonica GN=SUT2 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 8.000e-25
Identity = 53/100 (53.00%), Postives = 74/100 (74.00%), Query Frame = 1
Query:    1 GPPPVGVKVGALAIFTVLGIPQAITFSVPFAMASIFSRTSAAGQGLSLGVLNLAIVVPQMLVSLLSGPFDAVCGGGNMPAFMVGAVAAALSGIVALTLLP 300
            G PP G+ + +L +FT+LG P AIT+S+P+AMA+        GQGL++G+LNLAIV+PQ++VSL SGP+D + GGGN PAF V A A+ + G+VA+  LP
Sbjct:  390 GVPPTGIVIASLVVFTILGAPLAITYSIPYAMAASRVENLGLGQGLAMGILNLAIVIPQVIVSLGSGPWDQLFGGGNAPAFAVAAAASFIGGLVAILGLP 489          
The following BLAST results are available for this feature:
BLAST of CK936487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
SUT_SPIOL9.111e-3769.91Sucrose transport protein OS=Spinacia oleracea PE=... [more]
SUC1_ARATH3.462e-3667.86Sucrose transport protein SUC1 OS=Arabidopsis thal... [more]
SUC2_ARATH1.718e-3568.57Sucrose transport protein SUC2 OS=Arabidopsis thal... [more]
SUC5_ARATH3.240e-3465.71Sucrose transport protein SUC5 OS=Arabidopsis thal... [more]
SUC8_ARATH7.471e-3165.31Sucrose transport protein SUC8 OS=Arabidopsis thal... [more]
SUC9_ARATH3.708e-3064.29Sucrose transport protein SUC9 OS=Arabidopsis thal... [more]
SUC6_ARATH6.324e-3063.27Putative sucrose transport protein SUC6 OS=Arabido... [more]
SUC7_ARATH3.139e-2964.29Putative sucrose transport protein SUC7 OS=Arabido... [more]
SUC4_ARATH5.540e-2654.63Sucrose transport protein SUC4 OS=Arabidopsis thal... [more]
SUT2_ORYSJ8.000e-2553.00Sucrose transport protein 2 OS=Oryza sativa subsp.... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004521_G01 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0001_IVF_G01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936487 ID=CK936487; Name=CK936487; organism=Citrus sinensis; type=EST; length=707bp
GGGCCGCCGCCGGTTGGTGTGAAAGTTGGCGCTTTGGCTATCTTCACTGT
GTTGGGAATTCCTCAAGCTATTACTTTCAGCGTTCCGTTTGCTATGGCAT
CCATATTTTCTAGAACTTCTGCTGCTGGTCAAGGGCTTTCGTTGGGTGTT
TTGAATCTTGCAATAGTTGTTCCACAGATGCTGGTGTCTTTACTTAGCGG
ACCCTTTGATGCCGTTTGCGGAGGTGGCAACATGCCGGCCTTTATGGTCG
GCGCAGTTGCGGCTGCCTTAAGTGGTATCGTTGCACTCACCCTGCTCCCA
TCAACAACCGCGGATGTTCCCCCGCCGATAACTGAAGCCGGAACTGCAAC
CGCAAATCAAACTAATAAGCTCTAGCTAGTCTTAGTTTGTTGGAAGAAAA
GAAGGGACAGACTTTTACTTTTTTTTTAAGTCATCCGAAATGTGCCTAAC
CCCTGAGTGTCTTTGGGAAAATAATTCTGCTGGTAAGTAAATGAATGTGG
TGCATGGCTGCAAGGCTTGTGTGTGTATGGAGTTTAAATGTATGTTGTTA
CTTGTAAGTGAGTGAAATAATTGACAAGGTGTTTGTTCGTAATTGCTATA
TTTTCGATGGCTTCGTTTTAAAATCACTTCGGTATTTACTTTTATTAAAG
AAAAATTATCTCTGTGCTACTTTTATTTTATTATATATACATTTGACCAA
AAAAAAA
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