EL492433

Overview
NameEL492433
Unique NameEL492433
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length201
Libraries
Library NameType
Citrus sinensis flesh cDNA-AFLP Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1414 contig Csv1_Contig1414:412..612. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EL492433 vs. ExPASy Swiss-Prot
Match: R35A3_ARATH (60S ribosomal protein L35a-3 OS=Arabidopsis thaliana GN=RPL35AC PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.371e-11
Identity = 31/33 (93.94%), Postives = 31/33 (93.94%), Query Frame = -1 
Query:   88 HGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 186
            HGNSGVVRAKF SNLPPKSMG RVRVFMYPSNI
Sbjct:   80 HGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112
[Close]
BLAST of EL492433 vs. ExPASy Swiss-Prot
Match: R35A1_ARATH (60S ribosomal protein L35a-1 OS=Arabidopsis thaliana GN=RPL35AA PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.371e-11
Identity = 31/33 (93.94%), Postives = 31/33 (93.94%), Query Frame = -1 
Query:   88 HGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 186
            HGNSGVVRAKF SNLPPKSMG RVRVFMYPSNI
Sbjct:   80 HGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112
The following BLAST results are available for this feature:
BLAST of EL492433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
R35A3_ARATH3.371e-1193.9460S ribosomal protein L35a-3 OS=Arabidopsis thalia... [more]
R35A1_ARATH3.371e-1193.9460S ribosomal protein L35a-1 OS=Arabidopsis thalia... [more]
back to top
Properties
Property NameValue
Genbank descriptionC0311 Citrus sinensis flesh cDNA-AFLP Library Citrus sinensis cDNA clone ClC0311, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EL492433 ID=EL492433; Name=EL492433; organism=Citrus sinensis; type=EST; length=201bp
GATGAGTCCTGAGTAAGCGAATAAATCCCAAATTCAGAAGGTAAATTTCA
CTTGTTGATCGAGTAGCTTCTCGAACCATGCTGCTCATATGTTGCTGGGA
TACATGAAAACCCTAACTCTATCTCCCATGGATTTGGGAGGGAGATTGGA
CTTGAACTTGGCGCGAACGACGCCGCTGTTACCGTGAGATCACTACGCAG
T
back to top