EL492419

Overview
NameEL492419
Unique NameEL492419
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length319
Libraries
Library NameType
Citrus sinensis flesh cDNA-AFLP Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EL492419 vs. ExPASy Swiss-Prot
Match: GEML5_ARATH (GEM-like protein 5 OS=Arabidopsis thaliana GN=At5g13200 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.329e-11
Identity = 26/43 (60.47%), Postives = 38/43 (88.37%), Query Frame = -3 
Query:  186 VKENASDKYMKIVTVEGHEFWFMGFVNFEKATNHLLNSLSEYR 314
            VKE   +KY+++ TV+GH+FWFMGFVN+EKAT+HLL S+S+++
Sbjct:  222 VKETPPEKYIQLTTVDGHDFWFMGFVNYEKATHHLLTSVSDFQ 264
The following BLAST results are available for this feature:
BLAST of EL492419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
GEML5_ARATH4.329e-1160.47GEM-like protein 5 OS=Arabidopsis thaliana GN=At5g... [more]
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Properties
Property NameValue
Genbank descriptionC0110 Citrus sinensis flesh cDNA-AFLP Library Citrus sinensis cDNA clone ClC0110, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EL492419 ID=EL492419; Name=EL492419; organism=Citrus sinensis; type=EST; length=319bp
CACAAAATACCACATGCAATNTCACAGGCTTTNCTAACCCAANCCAACGC
TCATCAAATTGCTNCAAACTGAAAGGAAACAACCAAAAGCAGNGCATAAG
AAAATTTTGAGTCACATGACGGCCTCCCAACAACCATCTTATACACAGCT
ACTGGTCGCCCACATCGCCCTGCACTTNCAGTTGCTCTGTATTCTGACAA
ACTGTTCAACAAGTGGTTCGTTGCTTTCTCGAAATTGACAAAGCCCATGA
ACCAAAATTCATGTCCCTCCACAGTTACAATCTTCATGTACTTGTCTGAT
GCATTTTCTTTTACTCAGG
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